RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 MCHR1Q99705 422 aa17.26■□□□□ 0.35
HOXA9-202ENST00000396345 TMEM27Q9HBJ8 222 aa17.26■□□□□ 0.35
HOXA9-202ENST00000396345 SH3GLB1Q9Y371 365 aa17.26■□□□□ 0.35
HOXA9-202ENST00000396345 SETXQ7Z333 2677 aaKnown RBP17.26■□□□□ 0.35
HOXA9-202ENST00000396345 FLNBO75369 2602 aaKnown RBP17.25■□□□□ 0.35
HOXA9-202ENST00000396345 TMEM72A0PK05 275 aa17.25■□□□□ 0.35
HOXA9-202ENST00000396345 TPST2O60704 377 aa17.25■□□□□ 0.35
HOXA9-202ENST00000396345 FMO6PO60774 539 aa17.25■□□□□ 0.35
HOXA9-202ENST00000396345 TFPIP10646 304 aa17.25■□□□□ 0.35
HOXA9-202ENST00000396345 SLC7A1P30825 629 aa17.25■□□□□ 0.35
HOXA9-202ENST00000396345 CARD18P57730 90 aa17.25■□□□□ 0.35
HOXA9-202ENST00000396345 ADORA2A-AS1P86434 159 aa17.25■□□□□ 0.35
HOXA9-202ENST00000396345 BNIP1Q12981 228 aa17.25■□□□□ 0.35
HOXA9-202ENST00000396345 OR1Q1Q15612 314 aa17.25■□□□□ 0.35
HOXA9-202ENST00000396345 NPTX1Q15818 432 aa17.25■□□□□ 0.35
HOXA9-202ENST00000396345 FXNQ16595 210 aa17.25■□□□□ 0.35
HOXA9-202ENST00000396345 C6orf89Q6UWU4 347 aa17.25■□□□□ 0.35
HOXA9-202ENST00000396345 CBLL1Q75N03 491 aa17.25■□□□□ 0.35
HOXA9-202ENST00000396345 CARM1Q86X55 608 aa17.25■□□□□ 0.35
HOXA9-202ENST00000396345 RBM45Q8IUH3 476 aaKnown RBP17.25■□□□□ 0.35
HOXA9-202ENST00000396345 OR4D11Q8NGI4 311 aa17.25■□□□□ 0.35
HOXA9-202ENST00000396345 ZNF845Q96IR2 970 aaPredicted RBP17.25■□□□□ 0.35
HOXA9-202ENST00000396345 OR5B2Q96R09 309 aa17.25■□□□□ 0.35
HOXA9-202ENST00000396345 PAQR5Q9NXK6 330 aaPredicted RBP17.25■□□□□ 0.35
HOXA9-202ENST00000396345 CLCF1Q9UBD9 225 aa17.25■□□□□ 0.35
HOXA9-202ENST00000396345 MAGEL2Q9UJ55 1249 aa17.25■□□□□ 0.35
HOXA9-202ENST00000396345 PRPF19Q9UMS4 504 aaKnown RBP17.25■□□□□ 0.35
HOXA9-202ENST00000396345 PCNX1Q96RV3 2341 aa17.25■□□□□ 0.35
HOXA9-202ENST00000396345 LRRK2Q5S007 2527 aa17.24■□□□□ 0.35
HOXA9-202ENST00000396345 A0A1B0GWA3 101 aa17.24■□□□□ 0.35
HOXA9-202ENST00000396345 GYG2O15488 501 aa17.24■□□□□ 0.35
HOXA9-202ENST00000396345 CXCL13O43927 109 aa17.24■□□□□ 0.35
HOXA9-202ENST00000396345 ZG16O60844 167 aa17.24■□□□□ 0.35
HOXA9-202ENST00000396345 LDLRP01130 860 aa17.24■□□□□ 0.35
HOXA9-202ENST00000396345 TNFRSF1BP20333 461 aa17.24■□□□□ 0.35
HOXA9-202ENST00000396345 CLK1P49759 484 aaKnown RBP17.24■□□□□ 0.35
HOXA9-202ENST00000396345 MAP2K6P52564 334 aa17.24■□□□□ 0.35
HOXA9-202ENST00000396345 SMSP52788 366 aa17.24■□□□□ 0.35
HOXA9-202ENST00000396345 DNAL1Q4LDG9 190 aa17.24■□□□□ 0.35
HOXA9-202ENST00000396345 SYT14P1Q58G82 188 aa17.24■□□□□ 0.35
HOXA9-202ENST00000396345 PLXDC2Q6UX71 529 aa17.24■□□□□ 0.35
HOXA9-202ENST00000396345 SEM1Q6ZVN7 128 aa17.24■□□□□ 0.35
HOXA9-202ENST00000396345 ATG4DQ86TL0 474 aaPredicted RBP17.24■□□□□ 0.35
HOXA9-202ENST00000396345 DNAJA4Q8WW22 397 aaPredicted RBP17.24■□□□□ 0.35
HOXA9-202ENST00000396345 RND1Q92730 232 aa17.24■□□□□ 0.35
HOXA9-202ENST00000396345 OSTF1Q92882 214 aa17.24■□□□□ 0.35
HOXA9-202ENST00000396345 WNT2BQ93097 391 aa17.24■□□□□ 0.35
HOXA9-202ENST00000396345 SLC7A6OSQ96CW6 309 aaPredicted RBP17.24■□□□□ 0.35
HOXA9-202ENST00000396345 DDIT4LQ96D03 193 aa17.24■□□□□ 0.35
HOXA9-202ENST00000396345 PCDHAC1Q9H158 963 aa17.24■□□□□ 0.35
HOXA9-202ENST00000396345 GORASP2Q9H8Y8 452 aa17.24■□□□□ 0.35
HOXA9-202ENST00000396345 TIGARQ9NQ88 270 aa17.24■□□□□ 0.35
HOXA9-202ENST00000396345 SELENONQ9NZV5 590 aa17.24■□□□□ 0.35
HOXA9-202ENST00000396345 RPS6KA6Q9UK32 745 aa17.24■□□□□ 0.35
HOXA9-202ENST00000396345 SNX13Q9Y5W8 968 aa17.24■□□□□ 0.35
HOXA9-202ENST00000396345 KIAA1549Q9HCM3 1950 aa17.23■□□□□ 0.35
HOXA9-202ENST00000396345 A0A1W2PNR3 127 aa17.23■□□□□ 0.35
HOXA9-202ENST00000396345 MBD3L4A6NDZ8 208 aaPredicted RBP17.23■□□□□ 0.35
HOXA9-202ENST00000396345 MBD3L3A6NE82 208 aaPredicted RBP17.23■□□□□ 0.35
HOXA9-202ENST00000396345 MBD3L5A6NJ08 208 aaPredicted RBP17.23■□□□□ 0.35
HOXA9-202ENST00000396345 SLC22A20A6NK97 555 aa17.23■□□□□ 0.35
HOXA9-202ENST00000396345 ZNF208O43345 1280 aa17.23■□□□□ 0.35
HOXA9-202ENST00000396345 ATP5HO75947 161 aa17.23■□□□□ 0.35
HOXA9-202ENST00000396345 TIMP3P35625 211 aa17.23■□□□□ 0.35
HOXA9-202ENST00000396345 OR1E2P47887 323 aa17.23■□□□□ 0.35
HOXA9-202ENST00000396345 BNIP2Q12982 314 aa17.23■□□□□ 0.35
HOXA9-202ENST00000396345 PON3Q15166 354 aa17.23■□□□□ 0.35
HOXA9-202ENST00000396345 ENTPD8Q5MY95 495 aa17.23■□□□□ 0.35
HOXA9-202ENST00000396345 RIPPLY2Q5TAB7 128 aa17.23■□□□□ 0.35
HOXA9-202ENST00000396345 PPP4R4Q6NUP7 873 aa17.23■□□□□ 0.35
HOXA9-202ENST00000396345 ULK3Q6PHR2 472 aa17.23■□□□□ 0.35
HOXA9-202ENST00000396345 P4HA3Q7Z4N8 544 aa17.23■□□□□ 0.35
HOXA9-202ENST00000396345 VTCN1Q7Z7D3 282 aa17.23■□□□□ 0.35
HOXA9-202ENST00000396345 MBD3L2Q8NHZ7 208 aaPredicted RBP17.23■□□□□ 0.35
HOXA9-202ENST00000396345 SSC4DQ8WTU2 575 aa17.23■□□□□ 0.35
HOXA9-202ENST00000396345 TM9SF2Q99805 663 aa17.23■□□□□ 0.35
HOXA9-202ENST00000396345 BTBD10Q9BSF8 475 aa17.23■□□□□ 0.35
HOXA9-202ENST00000396345 THTPAQ9BU02 230 aa17.23■□□□□ 0.35
HOXA9-202ENST00000396345 OR11A1Q9GZK7 315 aa17.23■□□□□ 0.35
HOXA9-202ENST00000396345 COQ10BQ9H8M1 238 aa17.23■□□□□ 0.35
HOXA9-202ENST00000396345 C12orf10Q9HB07 376 aa17.23■□□□□ 0.35
HOXA9-202ENST00000396345 DCAF13Q9NV06 445 aaKnown RBP17.23■□□□□ 0.35
HOXA9-202ENST00000396345 MCTS1Q9ULC4 181 aaKnown RBP17.23■□□□□ 0.35
HOXA9-202ENST00000396345 ZNF175Q9Y473 711 aa17.23■□□□□ 0.35
HOXA9-202ENST00000396345 A0A0B4J2E0 115 aa17.22■□□□□ 0.35
HOXA9-202ENST00000396345 A0A1B0GX12 115 aa17.22■□□□□ 0.35
HOXA9-202ENST00000396345 WIPF3A6NGB9 483 aa17.22■□□□□ 0.35
HOXA9-202ENST00000396345 ELOA3DA6NLF2 546 aaPredicted RBP17.22■□□□□ 0.35
HOXA9-202ENST00000396345 CPSF4LA6NMK7 179 aaKnown RBP17.22■□□□□ 0.35
HOXA9-202ENST00000396345 ARPC2O15144 300 aa17.22■□□□□ 0.35
HOXA9-202ENST00000396345 PDE5AO76074 875 aa17.22■□□□□ 0.35
HOXA9-202ENST00000396345 SYNGR4O95473 234 aa17.22■□□□□ 0.35
HOXA9-202ENST00000396345 TGM6O95932 706 aa17.22■□□□□ 0.35
HOXA9-202ENST00000396345 IL2RAP01589 272 aa17.22■□□□□ 0.35
HOXA9-202ENST00000396345 PNMTP11086 282 aa17.22■□□□□ 0.35
HOXA9-202ENST00000396345 ELOA3BQ3SY89 546 aa17.22■□□□□ 0.35
HOXA9-202ENST00000396345 ALG10BQ5I7T1 473 aa17.22■□□□□ 0.35
HOXA9-202ENST00000396345 ZNF613Q6PF04 617 aa17.22■□□□□ 0.35
HOXA9-202ENST00000396345 DEF8Q6ZN54 512 aa17.22■□□□□ 0.35
HOXA9-202ENST00000396345 TMPPEQ6ZT21 453 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms