RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 PDK3Q15120 406 aa16.19■□□□□ 0.18
TMEM88-201ENST00000301599 GSTA3Q16772 222 aa16.19■□□□□ 0.18
TMEM88-201ENST00000301599 Q6ZT83 130 aa16.19■□□□□ 0.18
TMEM88-201ENST00000301599 GALNT5Q7Z7M9 940 aa16.19■□□□□ 0.18
TMEM88-201ENST00000301599 HMGN2P46Q86SG4 172 aa16.19■□□□□ 0.18
TMEM88-201ENST00000301599 BIVMQ86UB2 503 aa16.19■□□□□ 0.18
TMEM88-201ENST00000301599 ADGRG3Q86Y34 549 aa16.19■□□□□ 0.18
TMEM88-201ENST00000301599 KRTAP1-3Q8IUG1 177 aa16.19■□□□□ 0.18
TMEM88-201ENST00000301599 PIWIL2Q8TC59 973 aaKnown RBP16.19■□□□□ 0.18
TMEM88-201ENST00000301599 CNOT9Q92600 299 aaKnown RBP16.19■□□□□ 0.18
TMEM88-201ENST00000301599 ZHX1-C8orf76Q96EF9 292 aa16.19■□□□□ 0.18
TMEM88-201ENST00000301599 MAELQ96JY0 434 aaKnown RBP16.19■□□□□ 0.18
TMEM88-201ENST00000301599 TMEM204Q9BSN7 226 aa16.19■□□□□ 0.18
TMEM88-201ENST00000301599 SLC38A1Q9H2H9 487 aa16.19■□□□□ 0.18
TMEM88-201ENST00000301599 HDGFL3Q9Y3E1 203 aa16.19■□□□□ 0.18
TMEM88-201ENST00000301599 CLDN24A6NM45 220 aa16.18■□□□□ 0.18
TMEM88-201ENST00000301599 UBDO15205 165 aa16.18■□□□□ 0.18
TMEM88-201ENST00000301599 PMS2P2O95744 297 aa16.18■□□□□ 0.18
TMEM88-201ENST00000301599 FESP07332 822 aa16.18■□□□□ 0.18
TMEM88-201ENST00000301599 IL7RP16871 459 aa16.18■□□□□ 0.18
TMEM88-201ENST00000301599 TSC22D1Q15714 1073 aa16.18■□□□□ 0.18
TMEM88-201ENST00000301599 SLC9B1Q4ZJI4 515 aa16.18■□□□□ 0.18
TMEM88-201ENST00000301599 Q5PR19 223 aa16.18■□□□□ 0.18
TMEM88-201ENST00000301599 BHLHA15Q7RTS1 189 aaPredicted RBP16.18■□□□□ 0.18
TMEM88-201ENST00000301599 YTHDF3Q7Z739 585 aaKnown RBP16.18■□□□□ 0.18
TMEM88-201ENST00000301599 ZNF100Q8IYN0 542 aa16.18■□□□□ 0.18
TMEM88-201ENST00000301599 ZNF75CPQ92670 426 aaPredicted RBP16.18■□□□□ 0.18
TMEM88-201ENST00000301599 NSRP1Q9H0G5 558 aaKnown RBP16.18■□□□□ 0.18
TMEM88-201ENST00000301599 ESRP2Q9H6T0 727 aaKnown RBP16.18■□□□□ 0.18
TMEM88-201ENST00000301599 RMND5AQ9H871 391 aa16.18■□□□□ 0.18
TMEM88-201ENST00000301599 ZIM2Q9NZV7 527 aa16.18■□□□□ 0.18
TMEM88-201ENST00000301599 EMC3Q9P0I2 261 aa16.18■□□□□ 0.18
TMEM88-201ENST00000301599 TRAPPC4Q9Y296 219 aa16.18■□□□□ 0.18
TMEM88-201ENST00000301599 ZFHX3Q15911 3703 aa16.18■□□□□ 0.18
TMEM88-201ENST00000301599 NF1P21359 2839 aa16.17■□□□□ 0.18
TMEM88-201ENST00000301599 KLF11O14901 512 aa16.17■□□□□ 0.18
TMEM88-201ENST00000301599 DNPH1O43598 174 aa16.17■□□□□ 0.18
TMEM88-201ENST00000301599 TMCC2O75069 709 aa16.17■□□□□ 0.18
TMEM88-201ENST00000301599 ANP32DO95626 131 aa16.17■□□□□ 0.18
TMEM88-201ENST00000301599 CNOT4O95628 575 aaKnown RBP16.17■□□□□ 0.18
TMEM88-201ENST00000301599 PLAUP00749 431 aa16.17■□□□□ 0.18
TMEM88-201ENST00000301599 DBIP07108 87 aaKnown RBP16.17■□□□□ 0.18
TMEM88-201ENST00000301599 CHRM4P08173 479 aa16.17■□□□□ 0.18
TMEM88-201ENST00000301599 INHBBP09529 407 aa16.17■□□□□ 0.18
TMEM88-201ENST00000301599 ZCCHC18P0CG32 403 aa16.17■□□□□ 0.18
TMEM88-201ENST00000301599 CAPRIN1Q14444 709 aaKnown RBP16.17■□□□□ 0.18
TMEM88-201ENST00000301599 TAB1Q15750 504 aa16.17■□□□□ 0.18
TMEM88-201ENST00000301599 COX20Q5RI15 118 aa16.17■□□□□ 0.18
TMEM88-201ENST00000301599 PEX5LQ8IYB4 626 aa16.17■□□□□ 0.18
TMEM88-201ENST00000301599 ZNF611Q8N823 705 aa16.17■□□□□ 0.18
TMEM88-201ENST00000301599 PNPT1Q8TCS8 783 aaKnown RBP16.17■□□□□ 0.18
TMEM88-201ENST00000301599 TMEM171Q8WVE6 324 aa16.17■□□□□ 0.18
TMEM88-201ENST00000301599 WDR60Q8WVS4 1066 aa16.17■□□□□ 0.18
TMEM88-201ENST00000301599 ITCHQ96J02 903 aa16.17■□□□□ 0.18
TMEM88-201ENST00000301599 ARL5BQ96KC2 179 aa16.17■□□□□ 0.18
TMEM88-201ENST00000301599 ZNF300Q96RE9 604 aaPredicted RBP16.17■□□□□ 0.18
TMEM88-201ENST00000301599 SDR39U1Q9NRG7 319 aaPredicted RBP16.17■□□□□ 0.18
TMEM88-201ENST00000301599 CALML5Q9NZT1 146 aa16.17■□□□□ 0.18
TMEM88-201ENST00000301599 PRSS50Q9UI38 385 aa16.17■□□□□ 0.18
TMEM88-201ENST00000301599 IGKV3D-15A0A087WSY6 115 aa16.16■□□□□ 0.18
TMEM88-201ENST00000301599 TMED7-TICAM2A0A0A6YYA0 188 aa16.16■□□□□ 0.18
TMEM88-201ENST00000301599 GPR171O14626 319 aa16.16■□□□□ 0.18
TMEM88-201ENST00000301599 HS3ST1O14792 307 aa16.16■□□□□ 0.18
TMEM88-201ENST00000301599 UQCRBP14927 111 aa16.16■□□□□ 0.18
TMEM88-201ENST00000301599 CCNA2P20248 432 aa16.16■□□□□ 0.18
TMEM88-201ENST00000301599 ADSLP30566 484 aaPredicted RBP16.16■□□□□ 0.18
TMEM88-201ENST00000301599 SLC1A3P43003 542 aa16.16■□□□□ 0.18
TMEM88-201ENST00000301599 MAP2K6P52564 334 aa16.16■□□□□ 0.18
TMEM88-201ENST00000301599 NCMAPQ5T1S8 102 aa16.16■□□□□ 0.18
TMEM88-201ENST00000301599 ADAM5Q6NVV9 412 aa16.16■□□□□ 0.18
TMEM88-201ENST00000301599 MSANTD1Q6ZTZ1 278 aa16.16■□□□□ 0.18
TMEM88-201ENST00000301599 SSX8Q7RTT4 187 aa16.16■□□□□ 0.18
TMEM88-201ENST00000301599 ZNF440Q8IYI8 595 aa16.16■□□□□ 0.18
TMEM88-201ENST00000301599 PERPQ96FX8 193 aa16.16■□□□□ 0.18
TMEM88-201ENST00000301599 OR52B2Q96RD2 323 aa16.16■□□□□ 0.18
TMEM88-201ENST00000301599 GSX2Q9BZM3 304 aa16.16■□□□□ 0.18
TMEM88-201ENST00000301599 CCDC134Q9H6E4 229 aa16.16■□□□□ 0.18
TMEM88-201ENST00000301599 TMEM181Q9P2C4 612 aa16.16■□□□□ 0.18
TMEM88-201ENST00000301599 TMED7Q9Y3B3 224 aa16.16■□□□□ 0.18
TMEM88-201ENST00000301599 FLNAP21333 2647 aaKnown RBP16.16■□□□□ 0.18
TMEM88-201ENST00000301599 ZNF469Q96JG9 3925 aaPredicted RBP16.16■□□□□ 0.18
TMEM88-201ENST00000301599 ARID1AO14497 2285 aa16.16■□□□□ 0.18
TMEM88-201ENST00000301599 CFAP73A6NFT4 308 aa16.15■□□□□ 0.18
TMEM88-201ENST00000301599 FAAHO00519 579 aa16.15■□□□□ 0.18
TMEM88-201ENST00000301599 AP3D1O14617 1153 aa16.15■□□□□ 0.18
TMEM88-201ENST00000301599 ZNF208O43345 1280 aa16.15■□□□□ 0.18
TMEM88-201ENST00000301599 ADAM11O75078 769 aa16.15■□□□□ 0.18
TMEM88-201ENST00000301599 CD3EP07766 207 aa16.15■□□□□ 0.18
TMEM88-201ENST00000301599 ROS1P08922 2347 aa16.15■□□□□ 0.18
TMEM88-201ENST00000301599 RPS4Y1P22090 263 aaKnown RBP16.15■□□□□ 0.18
TMEM88-201ENST00000301599 CRATP43155 626 aa16.15■□□□□ 0.18
TMEM88-201ENST00000301599 POLR2HP52434 150 aaKnown RBP16.15■□□□□ 0.18
TMEM88-201ENST00000301599 POLR2JP52435 117 aaKnown RBP16.15■□□□□ 0.18
TMEM88-201ENST00000301599 OR2B6P58173 313 aa16.15■□□□□ 0.18
TMEM88-201ENST00000301599 PLAURQ03405 335 aa16.15■□□□□ 0.18
TMEM88-201ENST00000301599 MIER2Q8N344 545 aa16.15■□□□□ 0.18
TMEM88-201ENST00000301599 PIGXQ8TBF5 258 aa16.15■□□□□ 0.18
TMEM88-201ENST00000301599 IGFBPL1Q8WX77 278 aa16.15■□□□□ 0.18
TMEM88-201ENST00000301599 AKAP1Q92667 903 aaKnown RBP eCLIP16.15■□□□□ 0.18
TMEM88-201ENST00000301599 DDIT4LQ96D03 193 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms