RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 PCDH15Q96QU1 1955 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 IGHV5-51A0A0C4DH38 117 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 SRPX2O60687 465 aaPredicted RBP16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 PRAMEF2O60811 474 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 SERPINI2O75830 405 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 CAPZBP47756 277 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 ZNF141Q15928 474 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 TBRG1Q3YBR2 411 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 NKAIN2Q5VXU1 208 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 LINC00114Q6XXX2 140 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 ZNF595Q8IYB9 648 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 ABHD4Q8TB40 342 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 ENKURQ8TC29 256 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 UBASH3BQ8TF42 649 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 ZNRF4Q8WWF5 429 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 TCTN2Q96GX1 697 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 YIPF2Q9BWQ6 316 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 BEX2Q9BXY8 128 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 ZNF576Q9H609 170 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 KLHL1Q9NR64 748 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 NPAP1Q9NZP6 1156 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 N6AMT1Q9Y5N5 214 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 CACNA1IQ9P0X4 2223 aa16.86■□□□□ 0.29
SHKBP1-201ENST00000291842 A0A0B4J293 547 aa16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 A0A1W2PRG6 482 aa16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 HTR3EA5X5Y0 456 aa16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 NPIPB9F8W1W9 429 aa16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 SEC14L5O43304 696 aa16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 IFI6P09912 130 aa16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 RPL4P36578 427 aaKnown RBP16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 MLLT3P42568 568 aaPredicted RBP16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 RBM34P42696 430 aaKnown RBP16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 KCNAB1Q14722 419 aa16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 ZNF550Q7Z398 422 aa16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 ZNF321PQ8N8H1 164 aa16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 OR51Q1Q8NH59 317 aa16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 RNF31Q96EP0 1072 aa16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 ZNF486Q96H40 463 aaPredicted RBP16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 AHCYL2Q96HN2 611 aaKnown RBP16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 EXTL2Q9UBQ6 330 aa16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 CHRNA9Q9UGM1 479 aa16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 A0A0G2JMP0 313 aa16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 A0A0X1KG70 313 aa16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 PLPP2O43688 288 aa16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 IFNGP01579 166 aa16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 TFP02787 698 aa16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 GAAP10253 952 aa16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 PSKH1P11801 424 aa16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 MYL9P24844 172 aa16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 MTNR1BP49286 362 aa16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 ARHGAP11AQ6P4F7 1023 aa16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 RDH10Q8IZV5 341 aa16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 OR4M2Q8NGB6 313 aa16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 SGTBQ96EQ0 304 aa16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 ST6GAL2Q96JF0 529 aa16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 MKKSQ9NPJ1 570 aaPredicted RBP16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 NUFIP1Q9UHK0 495 aaKnown RBP16.85■□□□□ 0.29
SHKBP1-201ENST00000291842 SERINC4A6NH21 518 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 C4orf47A7E2U8 309 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 A8MUA0 341 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 SDC3O75056 442 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 NDUFB2O95178 105 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 NSA2O95478 260 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 PAHP00439 452 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 IGFBP4P22692 258 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 F8A1P23610 371 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 CCDC85BQ15834 202 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 DEFB133Q30KQ1 61 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 SYT9Q86SS6 491 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 TSTD1Q8NFU3 115 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 ZPLD1Q8TCW7 415 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 GHSRQ92847 366 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 NMNAT3Q96T66 252 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 GDF15Q99988 308 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 G6PC3Q9BUM1 346 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 TP63Q9H3D4 680 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 RNF121Q9H920 327 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 INPP5EQ9NRR6 644 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 RASD1Q9Y272 281 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 TMEM131Q92545 1883 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 GSTT2P0CG29 244 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 GSTT2BP0CG30 244 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 GALP22466 123 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 CCR4P51679 360 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 IGLV3-21P80748 117 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 IFITM2Q01629 132 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 GAS6Q14393 721 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 LYPD4Q6UWN0 246 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 GPALPP1Q8IXQ4 340 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 SLC7A5P1Q8MH63 180 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 PGLYRP3Q96LB9 341 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 FRMD6Q96NE9 622 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 CTRCQ99895 268 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 BAIAP2Q9UQB8 552 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 MTCH2Q9Y6C9 303 aa16.84■□□□□ 0.29
SHKBP1-201ENST00000291842 IGHV1OR15-9A0A0B4J2B8 117 aa16.83■□□□□ 0.28
SHKBP1-201ENST00000291842 CHURC1-FNTBB4DL54 471 aa16.83■□□□□ 0.28
SHKBP1-201ENST00000291842 GMFGO60234 142 aa16.83■□□□□ 0.28
SHKBP1-201ENST00000291842 MAP2K3P46734 347 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms