RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, human

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDRT1-208	ENST00000630868	SNAP91	O60641	907 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	CLDN11	O75508	207 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	EML2	O95834	649 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	GNA14	O95837	355 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	PAK4	O96013	591 aa	Predicted RBP	4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	CELA2A	P08217	269 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	TPM1	P09493	284 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	SLC2A3	P11169	496 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	PSG1	P11464	419 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	ADRB3	P13945	408 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	MSH3	P20585	1137 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	EFNA1	P20827	205 aa	Predicted RBP	4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	GPX3	P22352	226 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	CCNC	P24863	283 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	DPP4	P27487	766 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	TRIM23	P36406	574 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	ETV5	P41161	510 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	NPY2R	P49146	381 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	DNA2	P51530	1060 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	OR1D5	P58170	312 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	CCL7	P80098	99 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	FKBP3	Q00688	224 aa	Known RBP	4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	HSPA14	Q0VDF9	509 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	NME3	Q13232	169 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	NFATC2	Q13469	925 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	MEF2D	Q14814	521 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	KIR2DS3	Q14952	304 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	OR1C1	Q15619	314 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	IGFBP7	Q16270	282 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	TPD52L1	Q16890	204 aa	Predicted RBP	4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	ZNF260	Q3ZCT1	412 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	LRRC37A5P	Q49AS3	106 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	ACCSL	Q4AC99	568 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	TAF3	Q5VWG9	929 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	ZNF626	Q68DY1	528 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	CAPN13	Q6MZZ7	669 aa	Predicted RBP	4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	C22orf39	Q6P5X5	142 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	TAS2R42	Q7RTR8	314 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	RD3	Q7Z3Z2	195 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	LHFPL4	Q7Z7J7	247 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	SETD3	Q86TU7	594 aa	Predicted RBP	4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	GGN	Q86UU5	652 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	ZFAND4	Q86XD8	727 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	ZNF683	Q8IZ20	524 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	MUC20	Q8N307	709 aa	Predicted RBP	4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	PARP8	Q8N3A8	854 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	ATP6V0D2	Q8N8Y2	350 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	DCAF4L2	Q8NA75	395 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	ZNF397	Q8NF99	534 aa	Predicted RBP	4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	OR13C5	Q8NGS8	318 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	AKR7L	Q8NHP1	331 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	GPR148	Q8TDV2	347 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	PPP1R16A	Q96I34	528 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	C10orf90	Q96M02	699 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	VPS35	Q96QK1	796 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	ERGIC2	Q96RQ1	377 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	CCDC77	Q9BR77	488 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	TBC1D10A	Q9BXI6	508 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	WWP1	Q9H0M0	922 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	LRRN3	Q9H3W5	708 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	NCOR1P1	Q9H4R4	102 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	EGLN3	Q9H6Z9	239 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	UBTD1	Q9HAC8	227 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	MEAF6	Q9HAF1	191 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	DYRK4	Q9NR20	520 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	ZNF319	Q9P2F9	582 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	PISD	Q9UG56	409 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	BCAP29	Q9UHQ4	241 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	ZNHIT2	Q9UHR6	403 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	ZNF490	Q9ULM2	529 aa	Predicted RBP	4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	PYCARD	Q9ULZ3	195 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	KLHDC2	Q9Y2U9	406 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	PCNX1	Q96RV3	2341 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	NF1	P21359	2839 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	SEC16A	O15027	2179 aa		4.06	□□□□□ -1.76
CDRT1-208	ENST00000630868	LRP4	O75096	1905 aa		4.05	□□□□□ -1.76
CDRT1-208	ENST00000630868	IGLV3-10	A0A075B6K4	115 aa		4.05	□□□□□ -1.76
CDRT1-208	ENST00000630868	MFSD2B	A6NFX1	497 aa		4.05	□□□□□ -1.76
CDRT1-208	ENST00000630868	IGLON5	A6NGN9	336 aa		4.05	□□□□□ -1.76
CDRT1-208	ENST00000630868		A8MVM7	634 aa		4.05	□□□□□ -1.76
CDRT1-208	ENST00000630868	SNURFL	B1AK76	121 aa		4.05	□□□□□ -1.76
CDRT1-208	ENST00000630868		K7ERQ8	282 aa		4.05	□□□□□ -1.76
CDRT1-208	ENST00000630868		M0QYV0	167 aa		4.05	□□□□□ -1.76
CDRT1-208	ENST00000630868	ZSCAN12	O43309	604 aa		4.05	□□□□□ -1.76
CDRT1-208	ENST00000630868	B4GAT1	O43505	415 aa		4.05	□□□□□ -1.76
CDRT1-208	ENST00000630868	SNN	O75324	88 aa	Predicted RBP	4.05	□□□□□ -1.76
CDRT1-208	ENST00000630868	ZMPSTE24	O75844	475 aa		4.05	□□□□□ -1.76
CDRT1-208	ENST00000630868	CD160	O95971	181 aa		4.05	□□□□□ -1.76
CDRT1-208	ENST00000630868	HPR	P00739	348 aa		4.05	□□□□□ -1.76
CDRT1-208	ENST00000630868	SERPINA3	P01011	423 aa		4.05	□□□□□ -1.76
CDRT1-208	ENST00000630868	MT-ND1	P03886	318 aa		4.05	□□□□□ -1.76
CDRT1-208	ENST00000630868	RPLP0	P05388	317 aa	Known RBP	4.05	□□□□□ -1.76
CDRT1-208	ENST00000630868	GSTA2	P09210	222 aa		4.05	□□□□□ -1.76
CDRT1-208	ENST00000630868	ALPI	P09923	528 aa		4.05	□□□□□ -1.76
CDRT1-208	ENST00000630868	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	4.05	□□□□□ -1.76
CDRT1-208	ENST00000630868	CCR1	P32246	355 aa		4.05	□□□□□ -1.76
CDRT1-208	ENST00000630868	ACADSB	P45954	432 aa		4.05	□□□□□ -1.76
CDRT1-208	ENST00000630868	CCR4	P51679	360 aa		4.05	□□□□□ -1.76
CDRT1-208	ENST00000630868	AIF1	P55008	147 aa		4.05	□□□□□ -1.76
CDRT1-208	ENST00000630868	CDH4	P55283	916 aa		4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms