RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 GPX2P18283 190 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 FKBP2P26885 142 aaKnown RBP12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 SLC7A1P30825 629 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 HTR3AP46098 478 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 IDH2P48735 452 aaKnown RBP12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 CLK1P49759 484 aaKnown RBP12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 GUCY1A3Q02108 690 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 ZNF239Q16600 458 aaKnown RBP12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 RPS26P11Q5JNZ5 115 aaPredicted RBP12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 C3orf33Q6P1S2 294 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 VRK2Q86Y07 508 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 ADGRG3Q86Y34 549 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 ZNF440Q8IYI8 595 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 C10orf111Q8N326 155 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 DPP10Q8N608 796 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 ZNF610Q8N9Z0 462 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 OR6K3Q8NGY3 331 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 RNF128Q8TEB7 428 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 SLC25A43Q8WUT9 341 aaPredicted RBP12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 ROBO4Q8WZ75 1007 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 MAL2Q969L2 176 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 REXO5Q96IC2 774 aaKnown RBP12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 SRXN1Q9BYN0 137 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 OPN3Q9H1Y3 402 aaPredicted RBP12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 CTPS2Q9NRF8 586 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 FGFR1OP2Q9NVK5 253 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 RLIMQ9NVW2 624 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 ELOVL5Q9NYP7 299 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 LEF1Q9UJU2 399 aaPredicted RBP12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 CLEC4AQ9UMR7 237 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 PROCRQ9UNN8 238 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 IFT52Q9Y366 437 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 NDUFAF1Q9Y375 327 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 EMC9Q9Y3B6 208 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 MED12LQ86YW9 2145 aa12.04□□□□□ -0.48
ARHGEF1-222ENST00000600517 A0A1W2PNR3 127 aa12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 EVPLLA8MZ36 301 aa12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 CTAG2O75638 210 aa12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 PRKD3O94806 890 aa12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 PGM3O95394 542 aa12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 VIMP08670 466 aaKnown RBP12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 CD79BP40259 229 aa12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 SLC1A3P43003 542 aa12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 ARFIP2P53365 341 aa12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 CTBP2P56545 445 aa12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 FAM27E3Q08E93 113 aa12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 EPS8Q12929 822 aa12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 LARS2Q15031 903 aaKnown RBP12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 RNPS1Q15287 305 aaKnown RBP12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 LIN52Q52LA3 116 aa12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 SYT14P1Q58G82 188 aa12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 RUNDC3AQ59EK9 446 aa12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 RNF220Q5VTB9 566 aa12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 CGB2Q6NT52 195 aa12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 ZNF836Q6ZNA1 936 aa12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 TMPPEQ6ZT21 453 aa12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 RETREG3Q86VR2 466 aa12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 CLIP4Q8N3C7 705 aa12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 LINC01560Q8TB33 94 aa12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 OR5B2Q96R09 309 aa12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 SLC39A3Q9BRY0 314 aa12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 SPATA9Q9BWV2 254 aa12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 ADAM19Q9H013 955 aa12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 IKZF5Q9H5V7 419 aa12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 GP6Q9HCN6 339 aa12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 CHRNA9Q9UGM1 479 aa12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 CORO2BQ9UQ03 480 aa12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 CHST2Q9Y4C5 530 aa12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 SPIN1Q9Y657 262 aaPredicted RBP12.03□□□□□ -0.48
ARHGEF1-222ENST00000600517 A6NNC1 897 aa12.02□□□□□ -0.49
ARHGEF1-222ENST00000600517 ANGPT2O15123 496 aa12.02□□□□□ -0.49
ARHGEF1-222ENST00000600517 UQCRBP14927 111 aa12.02□□□□□ -0.49
ARHGEF1-222ENST00000600517 ETS2P15036 469 aa12.02□□□□□ -0.49
ARHGEF1-222ENST00000600517 ENPP1P22413 925 aa12.02□□□□□ -0.49
ARHGEF1-222ENST00000600517 MDH1P40925 334 aaKnown RBP12.02□□□□□ -0.49
ARHGEF1-222ENST00000600517 ACAA2P42765 397 aaKnown RBP12.02□□□□□ -0.49
ARHGEF1-222ENST00000600517 MAP2K6P52564 334 aa12.02□□□□□ -0.49
ARHGEF1-222ENST00000600517 ZNF311Q5JNZ3 666 aa12.02□□□□□ -0.49
ARHGEF1-222ENST00000600517 FCRLAQ7L513 359 aa12.02□□□□□ -0.49
ARHGEF1-222ENST00000600517 ZNF550Q7Z398 422 aa12.02□□□□□ -0.49
ARHGEF1-222ENST00000600517 SLC43A2Q8N370 569 aa12.02□□□□□ -0.49
ARHGEF1-222ENST00000600517 BBS10Q8TAM1 723 aa12.02□□□□□ -0.49
ARHGEF1-222ENST00000600517 ABHD3Q8WU67 409 aa12.02□□□□□ -0.49
ARHGEF1-222ENST00000600517 ANKRD27Q96NW4 1050 aa12.02□□□□□ -0.49
ARHGEF1-222ENST00000600517 DACH2Q96NX9 599 aa12.02□□□□□ -0.49
ARHGEF1-222ENST00000600517 TMEM38AQ9H6F2 299 aa12.02□□□□□ -0.49
ARHGEF1-222ENST00000600517 ARMC7Q9H6L4 198 aa12.02□□□□□ -0.49
ARHGEF1-222ENST00000600517 MRGBPQ9NV56 204 aa12.02□□□□□ -0.49
ARHGEF1-222ENST00000600517 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.02□□□□□ -0.49
ARHGEF1-222ENST00000600517 OSGIN1Q9UJX0 560 aa12.02□□□□□ -0.49
ARHGEF1-222ENST00000600517 ZNF443Q9Y2A4 671 aaPredicted RBP12.02□□□□□ -0.49
ARHGEF1-222ENST00000600517 SPG11Q96JI7 2443 aa12.02□□□□□ -0.49
ARHGEF1-222ENST00000600517 CSMD1Q96PZ7 3565 aa12.02□□□□□ -0.49
ARHGEF1-222ENST00000600517 OTOGQ6ZRI0 2925 aa12.01□□□□□ -0.49
ARHGEF1-222ENST00000600517 TMED7-TICAM2A0A0A6YYA0 188 aa12.01□□□□□ -0.49
ARHGEF1-222ENST00000600517 C5orf58C9J3I9 102 aa12.01□□□□□ -0.49
ARHGEF1-222ENST00000600517 SULT2B1O00204 365 aa12.01□□□□□ -0.49
ARHGEF1-222ENST00000600517 SMAD9O15198 467 aaKnown RBP12.01□□□□□ -0.49
ARHGEF1-222ENST00000600517 ZNF208O43345 1280 aa12.01□□□□□ -0.49
ARHGEF1-222ENST00000600517 YES1P07947 543 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms