RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 IDH2P48735 452 aaKnown RBP11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 DIO1P49895 249 aa11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 RAC3P60763 192 aa11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 TXNL4AP83876 142 aaKnown RBP11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 GNA13Q14344 377 aa11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 SYT14P1Q58G82 188 aa11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 C6orf10Q5SRN2 563 aa11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 CXorf67Q86X51 503 aaPredicted RBP11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 TGIF2LYQ8IUE0 185 aa11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 SLC43A2Q8N370 569 aa11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 FAM71CQ8NEG0 241 aa11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 WDR60Q8WVS4 1066 aa11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 OIT3Q8WWZ8 545 aa11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 CNOT9Q92600 299 aaKnown RBP11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 ZNF775Q96BV0 537 aaPredicted RBP11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 TRNT1Q96Q11 434 aaKnown RBP11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 HS3ST6Q96QI5 342 aa11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 SLC38A1Q9H2H9 487 aa11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 RMND5AQ9H871 391 aa11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 CTPS2Q9NRF8 586 aa11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 KLHL9Q9P2J3 617 aa11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 SPIN1Q9Y657 262 aaPredicted RBP11.31□□□□□ -0.6
NPLOC4-213ENST00000573519 FAM234BA2RU67 622 aa11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 ETV2O00321 342 aaPredicted RBP11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 AP3D1O14617 1153 aa11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 SMAD9O15198 467 aaKnown RBP11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 DNAJA2O60884 412 aa11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 THBDP07204 575 aa11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 FESP07332 822 aa11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 NID1P14543 1247 aa11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 IL7RP16871 459 aa11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 CD53P19397 219 aa11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 STX1BP61266 288 aa11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 CSNK2A1P68400 391 aaPredicted RBP11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 RASGEF1BQ0VAM2 473 aa11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 TSC22D1Q15714 1073 aa11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 SLC2A7Q6PXP3 512 aa11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 TFAP2EQ6VUC0 442 aa11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 LRRC74BQ6ZQY2 392 aa11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 GRINAQ7Z429 371 aa11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 FUNDC1Q8IVP5 155 aa11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 SLC25A43Q8WUT9 341 aaPredicted RBP11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 S100PBPQ96BU1 408 aa11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 AURKBQ96GD4 344 aaPredicted RBP11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 ITCHQ96J02 903 aa11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 ZNF300Q96RE9 604 aaPredicted RBP11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 PSD2Q9BQI7 771 aa11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 TACO1Q9BSH4 297 aaKnown RBP11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 CCDC28BQ9BUN5 200 aa11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 CCDC106Q9BWC9 280 aa11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 MTHFD2LQ9H903 347 aaPredicted RBP11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 GP6Q9HCN6 339 aa11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 EXOSC3Q9NQT5 275 aaKnown RBP11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 P2RX2Q9UBL9 471 aa11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 CHRNA9Q9UGM1 479 aa11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 DCTN4Q9UJW0 460 aa11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 GPR52Q9Y2T5 361 aa11.3□□□□□ -0.6
NPLOC4-213ENST00000573519 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.29□□□□□ -0.6
NPLOC4-213ENST00000573519 AGAP5A6NIR3 686 aa11.29□□□□□ -0.6
NPLOC4-213ENST00000573519 ADAP00813 363 aa11.29□□□□□ -0.6
NPLOC4-213ENST00000573519 BCHEP06276 602 aa11.29□□□□□ -0.6
NPLOC4-213ENST00000573519 DBIP07108 87 aaKnown RBP11.29□□□□□ -0.6
NPLOC4-213ENST00000573519 ETFAP13804 333 aa11.29□□□□□ -0.6
NPLOC4-213ENST00000573519 IL32P24001 234 aa11.29□□□□□ -0.6
NPLOC4-213ENST00000573519 ADAM8P78325 824 aa11.29□□□□□ -0.6
NPLOC4-213ENST00000573519 PLAURQ03405 335 aa11.29□□□□□ -0.6
NPLOC4-213ENST00000573519 FOXD4Q12950 439 aaPredicted RBP11.29□□□□□ -0.6
NPLOC4-213ENST00000573519 ACKR1Q16570 336 aa11.29□□□□□ -0.6
NPLOC4-213ENST00000573519 BEX5Q5H9J7 111 aa11.29□□□□□ -0.6
NPLOC4-213ENST00000573519 TMPPEQ6ZT21 453 aa11.29□□□□□ -0.6
NPLOC4-213ENST00000573519 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.29□□□□□ -0.6
NPLOC4-213ENST00000573519 CMIPQ8IY22 773 aa11.29□□□□□ -0.6
NPLOC4-213ENST00000573519 PEX5LQ8IYB4 626 aa11.29□□□□□ -0.6
NPLOC4-213ENST00000573519 STEAP2Q8NFT2 490 aa11.29□□□□□ -0.6
NPLOC4-213ENST00000573519 GTF2H4Q92759 462 aa11.29□□□□□ -0.6
NPLOC4-213ENST00000573519 ZHX1-C8orf76Q96EF9 292 aa11.29□□□□□ -0.6
NPLOC4-213ENST00000573519 PLPPR2Q96GM1 343 aa11.29□□□□□ -0.6
NPLOC4-213ENST00000573519 CCL19Q99731 98 aa11.29□□□□□ -0.6
NPLOC4-213ENST00000573519 TMUB1Q9BVT8 246 aa11.29□□□□□ -0.6
NPLOC4-213ENST00000573519 OR11A1Q9GZK7 315 aa11.29□□□□□ -0.6
NPLOC4-213ENST00000573519 TPT1P8Q9HAU6 139 aa11.29□□□□□ -0.6
NPLOC4-213ENST00000573519 BCO1Q9HAY6 547 aa11.29□□□□□ -0.6
NPLOC4-213ENST00000573519 NPHS2Q9NP85 383 aa11.29□□□□□ -0.6
NPLOC4-213ENST00000573519 BEX4Q9NWD9 120 aaPredicted RBP11.29□□□□□ -0.6
NPLOC4-213ENST00000573519 HIVEP1P15822 2718 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 TMED7-TICAM2A0A0A6YYA0 188 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 TMEM247A6NEH6 219 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 CFAP73A6NFT4 308 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 NR5A2O00482 541 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 KLF4O43474 513 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 CYTIPO60759 359 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 EDF1O60869 148 aaKnown RBP11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 SMPD2O60906 423 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 ADAM11O75078 769 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 GCM2O75603 506 aaPredicted RBP11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 UQCRBP14927 111 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 PSMB1P20618 241 aaKnown RBP11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 FPR1P21462 350 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 HTR3AP46098 478 aa11.28□□□□□ -0.6
NPLOC4-213ENST00000573519 CRISP3P54108 245 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms