RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 MS4A8Q9BY19 250 aa11.17□□□□□ -0.62
NEK9-210ENST00000557026 YARS2Q9Y2Z4 477 aaKnown RBP11.17□□□□□ -0.62
NEK9-210ENST00000557026 IER3IP1Q9Y5U9 82 aa11.17□□□□□ -0.62
NEK9-210ENST00000557026 DLG5Q8TDM6 1919 aa11.17□□□□□ -0.62
NEK9-210ENST00000557026 METTL15A6NJ78 407 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 ZSCAN5BA6NJL1 495 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 M0R233 179 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 ZNF749O43361 778 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 TBX10O75333 385 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 NSA2O95478 260 aaKnown RBP11.16□□□□□ -0.62
NEK9-210ENST00000557026 ELAVL4P26378 380 aaKnown RBP11.16□□□□□ -0.62
NEK9-210ENST00000557026 RUNX2Q13950 521 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 GRINAQ7Z429 371 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 NAGSQ8N159 534 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 LINC01465Q8N7H1 131 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 FAM210AQ96ND0 272 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 FEVQ99581 238 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 CLMPQ9H6B4 373 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 CNIH4Q9P003 139 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 MGAT4CQ9UBM8 478 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 A0A1W2PPC4 97 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 DSCR3O14972 297 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 OPRD1P41143 372 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 FNTBP49356 437 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 TSPAN31Q12999 210 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 HBMQ6B0K9 141 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 LILRB2Q8N423 598 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 WDR20Q8TBZ3 569 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 NKX3-1Q99801 234 aaPredicted RBP11.16□□□□□ -0.62
NEK9-210ENST00000557026 TREX2Q9BQ50 279 aaPredicted RBP11.16□□□□□ -0.62
NEK9-210ENST00000557026 MTG2Q9H4K7 406 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 NMNAT1Q9HAN9 279 aaPredicted RBP11.16□□□□□ -0.62
NEK9-210ENST00000557026 DCAF13Q9NV06 445 aaKnown RBP11.16□□□□□ -0.62
NEK9-210ENST00000557026 INTS6Q9UL03 887 aaKnown RBP11.16□□□□□ -0.62
NEK9-210ENST00000557026 RPH3AQ9Y2J0 694 aaPredicted RBP11.16□□□□□ -0.62
NEK9-210ENST00000557026 ALS2Q96Q42 1657 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 RGPD1P0DJD0 1748 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 SHISA7A6NL88 538 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 TMEM212A6NML5 194 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 SFTPBP07988 381 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 GGT5P36269 586 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 OLIG2Q13516 323 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 COL28A1Q2UY09 1125 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 TMEM31Q5JXX7 168 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 MARVELD2Q8N4S9 558 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 ZNF431Q8TF32 576 aaPredicted RBP11.16□□□□□ -0.62
NEK9-210ENST00000557026 CDS1Q92903 461 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 ALG8Q9BVK2 526 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 MOB1AQ9H8S9 216 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 TREM1Q9NP99 234 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 TIAM2Q8IVF5 1701 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 MCRIP1C9JLW8 97 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 CRTAPO75718 401 aaPredicted RBP11.16□□□□□ -0.62
NEK9-210ENST00000557026 METRNLQ641Q3 311 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 ZNF761Q86XN6 746 aaPredicted RBP11.16□□□□□ -0.62
NEK9-210ENST00000557026 NLGN4XQ8N0W4 816 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 TEX29Q8N6K0 151 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 SYT14Q8NB59 555 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 OIT3Q8WWZ8 545 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 NT5C3BQ969T7 300 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 WACQ9BTA9 647 aa11.16□□□□□ -0.62
NEK9-210ENST00000557026 A0A1W2PPC1 479 aa11.15□□□□□ -0.62
NEK9-210ENST00000557026 F5H5K5 113 aa11.15□□□□□ -0.62
NEK9-210ENST00000557026 GPR39O43194 453 aa11.15□□□□□ -0.62
NEK9-210ENST00000557026 SUSD5O60279 629 aa11.15□□□□□ -0.62
NEK9-210ENST00000557026 ATXN1LP0C7T5 689 aaKnown RBP11.15□□□□□ -0.62
NEK9-210ENST00000557026 ATF4P18848 351 aaPredicted RBP11.15□□□□□ -0.62
NEK9-210ENST00000557026 DLSTP36957 453 aa11.15□□□□□ -0.62
NEK9-210ENST00000557026 HTR5AP47898 357 aa11.15□□□□□ -0.62
NEK9-210ENST00000557026 CX3CR1P49238 355 aa11.15□□□□□ -0.62
NEK9-210ENST00000557026 RGS6P49758 472 aa11.15□□□□□ -0.62
NEK9-210ENST00000557026 ADPRHP54922 357 aa11.15□□□□□ -0.62
NEK9-210ENST00000557026 ODF4Q2M2E3 257 aa11.15□□□□□ -0.62
NEK9-210ENST00000557026 CBLL1Q75N03 491 aa11.15□□□□□ -0.62
NEK9-210ENST00000557026 MEPCEQ7L2J0 689 aaKnown RBP11.15□□□□□ -0.62
NEK9-210ENST00000557026 ST8SIA1Q92185 356 aa11.15□□□□□ -0.62
NEK9-210ENST00000557026 DUSP22Q9NRW4 184 aa11.15□□□□□ -0.62
NEK9-210ENST00000557026 STARD5Q9NSY2 213 aa11.15□□□□□ -0.62
NEK9-210ENST00000557026 B4GAT1O43505 415 aa11.15□□□□□ -0.62
NEK9-210ENST00000557026 DIRAS1O95057 198 aa11.15□□□□□ -0.62
NEK9-210ENST00000557026 AIFM1O95831 613 aa11.15□□□□□ -0.62
NEK9-210ENST00000557026 PXNP49023 591 aaPredicted RBP11.15□□□□□ -0.62
NEK9-210ENST00000557026 MRPL58Q14197 206 aaKnown RBP11.15□□□□□ -0.62
NEK9-210ENST00000557026 GPR18Q14330 331 aa11.15□□□□□ -0.62
NEK9-210ENST00000557026 MBTPS1Q14703 1052 aa11.15□□□□□ -0.62
NEK9-210ENST00000557026 OR1Q1Q15612 314 aa11.15□□□□□ -0.62
NEK9-210ENST00000557026 PGGHGQ32M88 737 aa11.15□□□□□ -0.62
NEK9-210ENST00000557026 TMEM176BQ3YBM2 270 aaPredicted RBP11.15□□□□□ -0.62
NEK9-210ENST00000557026 LETMD1Q6P1Q0 360 aa11.15□□□□□ -0.62
NEK9-210ENST00000557026 SLC25A44Q96H78 314 aaPredicted RBP11.15□□□□□ -0.62
NEK9-210ENST00000557026 CCDC120Q96HB5 630 aa11.15□□□□□ -0.62
NEK9-210ENST00000557026 SOX17Q9H6I2 414 aaPredicted RBP11.15□□□□□ -0.62
NEK9-210ENST00000557026 PROCRQ9UNN8 238 aa11.15□□□□□ -0.62
NEK9-210ENST00000557026 NFS1Q9Y697 457 aa11.15□□□□□ -0.62
NEK9-210ENST00000557026 ITGAMP11215 1152 aa11.15□□□□□ -0.62
NEK9-210ENST00000557026 NFYAP23511 347 aaPredicted RBP11.15□□□□□ -0.62
NEK9-210ENST00000557026 TACR3P29371 465 aa11.15□□□□□ -0.62
NEK9-210ENST00000557026 AKR1C8PQ5T2L2 129 aa11.15□□□□□ -0.62
NEK9-210ENST00000557026 WDR5BQ86VZ2 330 aa11.15□□□□□ -0.62
NEK9-210ENST00000557026 CLECL1Q8IZS7 167 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms