RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 SURF4O15260 269 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 NR2F1P10589 423 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 UROSP10746 265 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 UCP3P55916 312 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 CLDN8P56748 225 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 GTF2BQ00403 316 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 SP3Q02447 781 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 TNFAIP8L2Q6P589 184 aaPredicted RBP8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 TMIGD1Q6UXZ0 262 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 CD163Q86VB7 1156 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 FAM160A2Q8N612 972 aaPredicted RBP8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 RAB24Q969Q5 203 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 HHIPQ96QV1 700 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 POLR2J3Q9H1A7 115 aaKnown RBP8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 MYOTQ9UBF9 498 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 LOC285095A0A1B0GVY8 99 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 A0A1W2PQ45 241 aaPredicted RBP8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 A0A1W2PQY0 241 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 DAPL1A0PJW8 107 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 TSPAN6O43657 245 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 CST3P01034 146 aaPredicted RBP8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 CSF1P09603 554 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 POLR2HP52434 150 aaKnown RBP8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 SELENOVP59797 346 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 IL2P60568 153 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 EGR3Q06889 387 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 DMWDQ09019 674 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 CUL7Q14999 1698 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 SLC14A2Q15849 920 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 CCL15Q16663 113 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 RIC1Q4ADV7 1423 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 SOHLH1Q5JUK2 328 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 OR5D16Q8NGK9 328 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 TSEN15Q8WW01 171 aaKnown RBP8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 CDS1Q92903 461 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 TMEM18Q96B42 140 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 BTN2A3PQ96KV6 586 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 MSL2Q9HCI7 577 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 ONECUT3O60422 494 aaPredicted RBP8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 STBD1O95210 358 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 METTL15P1P0C7V9 234 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 HSD17B1P14061 328 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 RPL3P39023 403 aaKnown RBP8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 SUMO1P63165 101 aaKnown RBP8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 CHIT1Q13231 466 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 CBFBQ13951 182 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 USP50Q70EL3 339 aaPredicted RBP8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 PHF13Q86YI8 300 aaPredicted RBP8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 CMTM1Q8IZ96 169 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 SMAP2Q8WU79 429 aaPredicted RBP8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 MALSU1Q96EH3 234 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 MACROD1Q9BQ69 325 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 NAA11Q9BSU3 229 aaPredicted RBP8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 FAIM2Q9BWQ8 316 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 SELENOKQ9Y6D0 94 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 A0A0A6YYC8 382 aaPredicted RBP8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 TMEM189-UBE2V1I3L0A0 370 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 I3L1I5 382 aaPredicted RBP8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 SUSD5O60279 629 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 SEMA7AO75326 666 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 LSM8O95777 96 aaKnown RBP8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 GALTP07902 379 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 SOX2P48431 317 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 CEBPDP49716 269 aaPredicted RBP8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 SLC35A2P78381 396 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 RAB11BQ15907 218 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 GJD3Q8N144 294 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 CELF5Q8N6W0 485 aaKnown RBP8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 CLEC4CQ8WTT0 213 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 EDARADDQ8WWZ3 215 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 ASB11Q8WXH4 323 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 MAL2Q969L2 176 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 OR7D2Q96RA2 312 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 SGIP1Q9BQI5 828 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 BARHL1Q9BZE3 327 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 IPPKQ9H8X2 491 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 GJD2Q9UKL4 321 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 EMCNQ9ULC0 261 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 TRAPPC4Q9Y296 219 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 CCL27Q9Y4X3 112 aa8.43□□□□□ -1.06
GTF2A1-203ENST00000553612 OR6C6A6NF89 314 aa8.42□□□□□ -1.06
GTF2A1-203ENST00000553612 OR6C76A6NM76 312 aa8.42□□□□□ -1.06
GTF2A1-203ENST00000553612 C22orf46C9J442 243 aa8.42□□□□□ -1.06
GTF2A1-203ENST00000553612 CA12O43570 354 aa8.42□□□□□ -1.06
GTF2A1-203ENST00000553612 ZNF207O43670 478 aaKnown RBP8.42□□□□□ -1.06
GTF2A1-203ENST00000553612 TLX3O43711 291 aaPredicted RBP8.42□□□□□ -1.06
GTF2A1-203ENST00000553612 TRBC1P01850 177 aa8.42□□□□□ -1.06
GTF2A1-203ENST00000553612 USP17L7P0C7H9 530 aa8.42□□□□□ -1.06
GTF2A1-203ENST00000553612 EPCAMP16422 314 aa8.42□□□□□ -1.06
GTF2A1-203ENST00000553612 TYRP1P17643 537 aa8.42□□□□□ -1.06
GTF2A1-203ENST00000553612 ITGB5P18084 799 aa8.42□□□□□ -1.06
GTF2A1-203ENST00000553612 IGFALSP35858 605 aa8.42□□□□□ -1.06
GTF2A1-203ENST00000553612 GDF5P43026 501 aa8.42□□□□□ -1.06
GTF2A1-203ENST00000553612 H3F3AP84243 136 aa8.42□□□□□ -1.06
GTF2A1-203ENST00000553612 NKPD1Q17RQ9 610 aa8.42□□□□□ -1.06
GTF2A1-203ENST00000553612 NPAS4Q8IUM7 802 aa8.42□□□□□ -1.06
GTF2A1-203ENST00000553612 SLC44A3Q8N4M1 653 aa8.42□□□□□ -1.06
GTF2A1-203ENST00000553612 IMP4Q96G21 291 aaKnown RBP8.42□□□□□ -1.06
GTF2A1-203ENST00000553612 TAAR1Q96RJ0 339 aa8.42□□□□□ -1.06
GTF2A1-203ENST00000553612 GPR87Q9BY21 358 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms