RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 NTN3O00634 580 aaPredicted RBP17.52■□□□□ 0.4
BRF1-215ENST00000549655 SOCS6O14544 535 aa17.52■□□□□ 0.4
BRF1-215ENST00000549655 UGT2B10P36537 528 aa17.52■□□□□ 0.4
BRF1-215ENST00000549655 SOWAHCQ53LP3 525 aaPredicted RBP17.52■□□□□ 0.4
BRF1-215ENST00000549655 ADCK1Q86TW2 530 aa17.52■□□□□ 0.4
BRF1-215ENST00000549655 C17orf47Q8NEP4 570 aa17.52■□□□□ 0.4
BRF1-215ENST00000549655 PLGRKTQ9HBL7 147 aa17.52■□□□□ 0.4
BRF1-215ENST00000549655 CMC2Q9NRP2 79 aa17.52■□□□□ 0.4
BRF1-215ENST00000549655 ONECUT2O95948 504 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 BMXP51813 675 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 LCN10Q6JVE6 187 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 GID4Q8IVV7 300 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 ZBTB44Q8NCP5 570 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 OR4F15Q8NGB8 312 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 METTL21AQ8WXB1 218 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 ATOH1Q92858 354 aaPredicted RBP17.51■□□□□ 0.39
BRF1-215ENST00000549655 NACC2Q96BF6 587 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 CENPOQ9BU64 300 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 LAT2Q9GZY6 243 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 RNF167Q9H6Y7 350 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 MED20Q9H944 212 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 OSGIN1Q9UJX0 560 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 EXOSC1Q9Y3B2 195 aaKnown RBP17.51■□□□□ 0.39
BRF1-215ENST00000549655 PMF1-BGLAPU3KQ54 211 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 WDR87Q6ZQQ6 2873 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 ELOA3DA6NLF2 546 aaPredicted RBP17.51■□□□□ 0.39
BRF1-215ENST00000549655 VSTM2BA6NLU5 285 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 GDF9O60383 454 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 PPM1BO75688 479 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 PPP1R3DO95685 299 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 SP9P0CG40 484 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 PNMTP11086 282 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 SLC6A6P31641 620 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 SERPINB10P48595 397 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 LIMK1P53667 647 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 PNLIPRP2P54317 469 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 EMP2P54851 167 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 TUBA1BP68363 451 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 RNF4P78317 190 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 MLLT11Q13015 90 aaPredicted RBP17.51■□□□□ 0.39
BRF1-215ENST00000549655 ELOA3BQ3SY89 546 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 TIMM50Q3ZCQ8 353 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 USP43Q70EL4 1123 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 TUBA1AQ71U36 451 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 ATG4DQ86TL0 474 aaPredicted RBP17.51■□□□□ 0.39
BRF1-215ENST00000549655 MARCH3Q86UD3 253 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 LRRC17Q8N6Y2 441 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 ELOA3Q8NG57 546 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 SH3YL1Q96HL8 342 aaPredicted RBP17.51■□□□□ 0.39
BRF1-215ENST00000549655 CCNL2Q96S94 520 aaPredicted RBP17.51■□□□□ 0.39
BRF1-215ENST00000549655 SEMA4CQ9C0C4 833 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 BAIAP2Q9UQB8 552 aa17.51■□□□□ 0.39
BRF1-215ENST00000549655 TMEM129A0AVI4 362 aa17.5■□□□□ 0.39
BRF1-215ENST00000549655 SAGE2PA6NJ88 616 aa17.5■□□□□ 0.39
BRF1-215ENST00000549655 LRRN3E7EW58 273 aa17.5■□□□□ 0.39
BRF1-215ENST00000549655 FGF5P12034 268 aa17.5■□□□□ 0.39
BRF1-215ENST00000549655 WNT4P56705 351 aa17.5■□□□□ 0.39
BRF1-215ENST00000549655 RPS3AP61247 264 aaKnown RBP17.5■□□□□ 0.39
BRF1-215ENST00000549655 ZNF117Q03924 483 aa17.5■□□□□ 0.39
BRF1-215ENST00000549655 IL11RAQ14626 422 aa17.5■□□□□ 0.39
BRF1-215ENST00000549655 OR2G6Q5TZ20 316 aa17.5■□□□□ 0.39
BRF1-215ENST00000549655 FCRLBQ6BAA4 426 aa17.5■□□□□ 0.39
BRF1-215ENST00000549655 NIPAL3Q6P499 406 aa17.5■□□□□ 0.39
BRF1-215ENST00000549655 BPHLQ86WA6 291 aaPredicted RBP17.5■□□□□ 0.39
BRF1-215ENST00000549655 SLC43A2Q8N370 569 aa17.5■□□□□ 0.39
BRF1-215ENST00000549655 APCDD1LQ8NCL9 501 aa17.5■□□□□ 0.39
BRF1-215ENST00000549655 NFAM1Q8NET5 270 aaPredicted RBP17.5■□□□□ 0.39
BRF1-215ENST00000549655 ZNF524Q96C55 264 aa17.5■□□□□ 0.39
BRF1-215ENST00000549655 KLHDC3Q9BQ90 382 aa17.5■□□□□ 0.39
BRF1-215ENST00000549655 HCAR1Q9BXC0 346 aa17.5■□□□□ 0.39
BRF1-215ENST00000549655 TBL1XR1Q9BZK7 514 aa17.5■□□□□ 0.39
BRF1-215ENST00000549655 SLC19A3Q9BZV2 496 aa17.5■□□□□ 0.39
BRF1-215ENST00000549655 EXOGQ9Y2C4 368 aaKnown RBP17.5■□□□□ 0.39
BRF1-215ENST00000549655 FRYLO94915 3013 aa17.5■□□□□ 0.39
BRF1-215ENST00000549655 IGKV1D-42A0A075B6H8 117 aa17.49■□□□□ 0.39
BRF1-215ENST00000549655 A0A1W2PQD3 144 aa17.49■□□□□ 0.39
BRF1-215ENST00000549655 RIIAD1A6NNX1 92 aa17.49■□□□□ 0.39
BRF1-215ENST00000549655 ALG1L2C9J202 215 aa17.49■□□□□ 0.39
BRF1-215ENST00000549655 MEN1O00255 615 aa17.49■□□□□ 0.39
BRF1-215ENST00000549655 HCRTR2O43614 444 aa17.49■□□□□ 0.39
BRF1-215ENST00000549655 NDUFB5O43674 189 aa17.49■□□□□ 0.39
BRF1-215ENST00000549655 LIMS3P0CW19 117 aa17.49■□□□□ 0.39
BRF1-215ENST00000549655 LIMS4P0CW20 117 aa17.49■□□□□ 0.39
BRF1-215ENST00000549655 PEPDP12955 493 aa17.49■□□□□ 0.39
BRF1-215ENST00000549655 MST1P26927 711 aa17.49■□□□□ 0.39
BRF1-215ENST00000549655 NOS3P29474 1203 aa17.49■□□□□ 0.39
BRF1-215ENST00000549655 ATP6V1E1P36543 226 aa17.49■□□□□ 0.39
BRF1-215ENST00000549655 ZNF829Q3KNS6 432 aaPredicted RBP17.49■□□□□ 0.39
BRF1-215ENST00000549655 ZNF362Q5T0B9 420 aaPredicted RBP17.49■□□□□ 0.39
BRF1-215ENST00000549655 TCEAL6Q6IPX3 200 aa17.49■□□□□ 0.39
BRF1-215ENST00000549655 MEPCEQ7L2J0 689 aaKnown RBP17.49■□□□□ 0.39
BRF1-215ENST00000549655 ZNF563Q8TA94 476 aa17.49■□□□□ 0.39
BRF1-215ENST00000549655 PTP4A1Q93096 173 aa17.49■□□□□ 0.39
BRF1-215ENST00000549655 TCEAL3Q969E4 200 aa17.49■□□□□ 0.39
BRF1-215ENST00000549655 SLIRPQ9GZT3 109 aaKnown RBP17.49■□□□□ 0.39
BRF1-215ENST00000549655 PRR23D1E9PI22 279 aaPredicted RBP17.49■□□□□ 0.39
BRF1-215ENST00000549655 GMFGO60234 142 aa17.49■□□□□ 0.39
BRF1-215ENST00000549655 NDUFB2O95178 105 aa17.49■□□□□ 0.39
BRF1-215ENST00000549655 PRR23D2P0DMB1 279 aaPredicted RBP17.49■□□□□ 0.39
BRF1-215ENST00000549655 OPRL1P41146 370 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms