RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 SPATA19Q7Z5L4 167 aa14.41□□□□□ -0.1
DDX55-212ENST00000544738 TUSC5Q8IXB3 177 aa14.41□□□□□ -0.1
DDX55-212ENST00000544738 TRIML2Q8N7C3 387 aa14.41□□□□□ -0.1
DDX55-212ENST00000544738 STEAP2Q8NFT2 490 aa14.41□□□□□ -0.1
DDX55-212ENST00000544738 NEURL3Q96EH8 262 aa14.41□□□□□ -0.1
DDX55-212ENST00000544738 CCDC115Q96NT0 180 aa14.41□□□□□ -0.1
DDX55-212ENST00000544738 SRXN1Q9BYN0 137 aa14.41□□□□□ -0.1
DDX55-212ENST00000544738 SAP130Q9H0E3 1048 aa14.41□□□□□ -0.1
DDX55-212ENST00000544738 COQ10BQ9H8M1 238 aa14.41□□□□□ -0.1
DDX55-212ENST00000544738 THAP1Q9NVV9 213 aa14.41□□□□□ -0.1
DDX55-212ENST00000544738 KLHL9Q9P2J3 617 aa14.41□□□□□ -0.1
DDX55-212ENST00000544738 BTNL2Q9UIR0 455 aa14.41□□□□□ -0.1
DDX55-212ENST00000544738 SLC35A3Q9Y2D2 325 aa14.41□□□□□ -0.1
DDX55-212ENST00000544738 A8MV72 311 aaPredicted RBP14.4□□□□□ -0.1
DDX55-212ENST00000544738 HDAC3O15379 428 aa14.4□□□□□ -0.1
DDX55-212ENST00000544738 KLF4O43474 513 aa14.4□□□□□ -0.1
DDX55-212ENST00000544738 KIAA0513O60268 411 aa14.4□□□□□ -0.1
DDX55-212ENST00000544738 THBDP07204 575 aa14.4□□□□□ -0.1
DDX55-212ENST00000544738 UBTFL6P0CB48 400 aaPredicted RBP14.4□□□□□ -0.1
DDX55-212ENST00000544738 ANXA11P50995 505 aaKnown RBP14.4□□□□□ -0.1
DDX55-212ENST00000544738 CASP9P55211 416 aa14.4□□□□□ -0.1
DDX55-212ENST00000544738 TNFAIP8L2Q6P589 184 aaPredicted RBP14.4□□□□□ -0.1
DDX55-212ENST00000544738 ANKRD42Q8N9B4 389 aa14.4□□□□□ -0.1
DDX55-212ENST00000544738 SLC25A43Q8WUT9 341 aaPredicted RBP14.4□□□□□ -0.1
DDX55-212ENST00000544738 IGFBPL1Q8WX77 278 aa14.4□□□□□ -0.1
DDX55-212ENST00000544738 RAB8BQ92930 207 aa14.4□□□□□ -0.1
DDX55-212ENST00000544738 ROPN1LQ96C74 230 aa14.4□□□□□ -0.1
DDX55-212ENST00000544738 USB1Q9BQ65 265 aaKnown RBP14.4□□□□□ -0.1
DDX55-212ENST00000544738 SLC35A5Q9BS91 424 aa14.4□□□□□ -0.1
DDX55-212ENST00000544738 C19orf24Q9BVV8 132 aa14.4□□□□□ -0.1
DDX55-212ENST00000544738 ACTR6Q9GZN1 396 aa14.4□□□□□ -0.1
DDX55-212ENST00000544738 AIG1Q9NVV5 245 aa14.4□□□□□ -0.1
DDX55-212ENST00000544738 MARCOQ9UEW3 520 aaPredicted RBP14.4□□□□□ -0.1
DDX55-212ENST00000544738 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.39□□□□□ -0.11
DDX55-212ENST00000544738 TMEM120BA0PK00 339 aa14.39□□□□□ -0.11
DDX55-212ENST00000544738 SLCO1B7G3V0H7 640 aa14.39□□□□□ -0.11
DDX55-212ENST00000544738 SDHDO14521 159 aa14.39□□□□□ -0.11
DDX55-212ENST00000544738 FAM157CP0CG43 387 aa14.39□□□□□ -0.11
DDX55-212ENST00000544738 ENPP1P22413 925 aa14.39□□□□□ -0.11
DDX55-212ENST00000544738 FKBP2P26885 142 aaKnown RBP14.39□□□□□ -0.11
DDX55-212ENST00000544738 LOXP28300 417 aaPredicted RBP14.39□□□□□ -0.11
DDX55-212ENST00000544738 SLC18A1P54219 525 aa14.39□□□□□ -0.11
DDX55-212ENST00000544738 SESN3P58005 492 aa14.39□□□□□ -0.11
DDX55-212ENST00000544738 CSNK2A1P68400 391 aaPredicted RBP14.39□□□□□ -0.11
DDX55-212ENST00000544738 HPCAP84074 193 aa14.39□□□□□ -0.11
DDX55-212ENST00000544738 RUNX1T1Q06455 604 aa14.39□□□□□ -0.11
DDX55-212ENST00000544738 MERTKQ12866 999 aa14.39□□□□□ -0.11
DDX55-212ENST00000544738 P2RY6Q15077 328 aa14.39□□□□□ -0.11
DDX55-212ENST00000544738 ATG16L1Q676U5 607 aa14.39□□□□□ -0.11
DDX55-212ENST00000544738 TYW3Q6IPR3 259 aaKnown RBP14.39□□□□□ -0.11
DDX55-212ENST00000544738 TFAP2EQ6VUC0 442 aa14.39□□□□□ -0.11
DDX55-212ENST00000544738 GABRG1Q8N1C3 465 aa14.39□□□□□ -0.11
DDX55-212ENST00000544738 ZNF619Q8N2I2 560 aa14.39□□□□□ -0.11
DDX55-212ENST00000544738 RAB3IL1Q8TBN0 382 aa14.39□□□□□ -0.11
DDX55-212ENST00000544738 ZNF524Q96C55 264 aa14.39□□□□□ -0.11
DDX55-212ENST00000544738 OR5B2Q96R09 309 aa14.39□□□□□ -0.11
DDX55-212ENST00000544738 PANX1Q96RD7 426 aa14.39□□□□□ -0.11
DDX55-212ENST00000544738 ZBTB18Q99592 522 aa14.39□□□□□ -0.11
DDX55-212ENST00000544738 BCO1Q9HAY6 547 aa14.39□□□□□ -0.11
DDX55-212ENST00000544738 ACER3Q9NUN7 267 aa14.39□□□□□ -0.11
DDX55-212ENST00000544738 LIPT1Q9Y234 373 aa14.39□□□□□ -0.11
DDX55-212ENST00000544738 SPIN1Q9Y657 262 aaPredicted RBP14.39□□□□□ -0.11
DDX55-212ENST00000544738 CENPVL1A0A0U1RR11 272 aa14.38□□□□□ -0.11
DDX55-212ENST00000544738 A0A1W2PNR3 127 aa14.38□□□□□ -0.11
DDX55-212ENST00000544738 GCM2O75603 506 aaPredicted RBP14.38□□□□□ -0.11
DDX55-212ENST00000544738 ALDOCP09972 364 aaKnown RBP14.38□□□□□ -0.11
DDX55-212ENST00000544738 PGM1P36871 562 aa14.38□□□□□ -0.11
DDX55-212ENST00000544738 APOBEC1P41238 236 aaKnown RBP14.38□□□□□ -0.11
DDX55-212ENST00000544738 WDR4P57081 412 aaKnown RBP14.38□□□□□ -0.11
DDX55-212ENST00000544738 UFM1P61960 85 aa14.38□□□□□ -0.11
DDX55-212ENST00000544738 KCNJ10P78508 379 aa14.38□□□□□ -0.11
DDX55-212ENST00000544738 RASGEF1BQ0VAM2 473 aa14.38□□□□□ -0.11
DDX55-212ENST00000544738 MAPK14Q16539 360 aa14.38□□□□□ -0.11
DDX55-212ENST00000544738 GPAT3Q53EU6 434 aa14.38□□□□□ -0.11
DDX55-212ENST00000544738 SFRP5Q5T4F7 317 aa14.38□□□□□ -0.11
DDX55-212ENST00000544738 FRRS1Q6ZNA5 592 aa14.38□□□□□ -0.11
DDX55-212ENST00000544738 OLIG3Q7RTU3 272 aa14.38□□□□□ -0.11
DDX55-212ENST00000544738 NUFIP2Q7Z417 695 aaKnown RBP14.38□□□□□ -0.11
DDX55-212ENST00000544738 GLB1L3Q8NCI6 653 aaPredicted RBP14.38□□□□□ -0.11
DDX55-212ENST00000544738 FAM71CQ8NEG0 241 aa14.38□□□□□ -0.11
DDX55-212ENST00000544738 ZNF563Q8TA94 476 aa14.38□□□□□ -0.11
DDX55-212ENST00000544738 PMM1Q92871 262 aa14.38□□□□□ -0.11
DDX55-212ENST00000544738 TRNT1Q96Q11 434 aaKnown RBP14.38□□□□□ -0.11
DDX55-212ENST00000544738 OR52E6Q96RD3 313 aa14.38□□□□□ -0.11
DDX55-212ENST00000544738 PSD2Q9BQI7 771 aa14.38□□□□□ -0.11
DDX55-212ENST00000544738 AMBRA1Q9C0C7 1298 aa14.38□□□□□ -0.11
DDX55-212ENST00000544738 NGBQ9NPG2 151 aa14.38□□□□□ -0.11
DDX55-212ENST00000544738 EXOSC3Q9NQT5 275 aaKnown RBP14.38□□□□□ -0.11
DDX55-212ENST00000544738 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.38□□□□□ -0.11
DDX55-212ENST00000544738 CCDC154A6NI56 674 aa14.37□□□□□ -0.11
DDX55-212ENST00000544738 SULT2B1O00204 365 aa14.37□□□□□ -0.11
DDX55-212ENST00000544738 HMGN4O00479 90 aa14.37□□□□□ -0.11
DDX55-212ENST00000544738 CYTIPO60759 359 aa14.37□□□□□ -0.11
DDX55-212ENST00000544738 SNNO75324 88 aaPredicted RBP14.37□□□□□ -0.11
DDX55-212ENST00000544738 ERLIN1O75477 346 aa14.37□□□□□ -0.11
DDX55-212ENST00000544738 PGRP06401 933 aa14.37□□□□□ -0.11
DDX55-212ENST00000544738 IL32P24001 234 aa14.37□□□□□ -0.11
DDX55-212ENST00000544738 EPHA3P29320 983 aa14.37□□□□□ -0.11
DDX55-212ENST00000544738 IDUAP35475 653 aa14.37□□□□□ -0.11
DDX55-212ENST00000544738 NME5P56597 212 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms