RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 MYOFQ9NZM1 2061 aa16.3■□□□□ 0.2
RAB40C-205ENST00000539661 GLOD5A6NK44 160 aa16.3■□□□□ 0.2
RAB40C-205ENST00000539661 K7ESM1 405 aa16.3■□□□□ 0.2
RAB40C-205ENST00000539661 PDCD5O14737 125 aa16.3■□□□□ 0.2
RAB40C-205ENST00000539661 RAB3AP20336 220 aa16.3■□□□□ 0.2
RAB40C-205ENST00000539661 ATP5A1P25705 553 aaKnown RBP16.3■□□□□ 0.2
RAB40C-205ENST00000539661 MPIP34949 423 aa16.3■□□□□ 0.2
RAB40C-205ENST00000539661 TMEM215Q68D42 235 aa16.3■□□□□ 0.2
RAB40C-205ENST00000539661 ZC3H14Q6PJT7 736 aaKnown RBP16.3■□□□□ 0.2
RAB40C-205ENST00000539661 OR13C5Q8NGS8 318 aa16.3■□□□□ 0.2
RAB40C-205ENST00000539661 COQ8AQ8NI60 647 aa16.3■□□□□ 0.2
RAB40C-205ENST00000539661 SP7Q8TDD2 431 aaPredicted RBP16.3■□□□□ 0.2
RAB40C-205ENST00000539661 THEM6Q8WUY1 208 aa16.3■□□□□ 0.2
RAB40C-205ENST00000539661 CNOT9Q92600 299 aaKnown RBP16.3■□□□□ 0.2
RAB40C-205ENST00000539661 PRSS27Q9BQR3 290 aa16.3■□□□□ 0.2
RAB40C-205ENST00000539661 NRIP3Q9NQ35 241 aa16.3■□□□□ 0.2
RAB40C-205ENST00000539661 ZNF69Q9UC07 566 aa16.3■□□□□ 0.2
RAB40C-205ENST00000539661 A0A1W2PPV9 198 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 DUXAA6NLW8 204 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 LCMT2O60294 686 aaKnown RBP16.29■□□□□ 0.2
RAB40C-205ENST00000539661 PRKRAO75569 313 aaKnown RBP16.29■□□□□ 0.2
RAB40C-205ENST00000539661 GABRA1P14867 456 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 SYN1P17600 705 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 SDHBP21912 280 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 PTGER1P34995 402 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 CSNK1G2P78368 415 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 PUS10Q3MIT2 529 aaKnown RBP16.29■□□□□ 0.2
RAB40C-205ENST00000539661 POM121L1PQ3SYA9 428 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 EIPR1Q53HC9 387 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 TMEM255AQ5JRV8 349 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 MRM1Q6IN84 353 aaKnown RBP16.29■□□□□ 0.2
RAB40C-205ENST00000539661 MTFR2Q6P444 385 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 APOOLQ6UXV4 268 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 OR52I2Q8NH67 350 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 FCAMRQ8WWV6 532 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 OR51V1Q9H2C8 321 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 MTHFD2LQ9H903 347 aaPredicted RBP16.29■□□□□ 0.2
RAB40C-205ENST00000539661 MED11Q9P086 117 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 A0A1W2PR48 441 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 ANKRD20A5PA0PJZ0 165 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 TRAPPC13A5PLN9 417 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 RIIAD1A6NNX1 92 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 ZIC2O95409 532 aaPredicted RBP16.29■□□□□ 0.2
RAB40C-205ENST00000539661 AGR2O95994 175 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 MRPL3P09001 348 aaKnown RBP16.29■□□□□ 0.2
RAB40C-205ENST00000539661 CLTBP09497 229 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 PSMB5P28074 263 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 SLC16A1P53985 500 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 KIAA1024LP59773 190 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 DUSP2Q05923 314 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 DPTQ07507 201 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 CDK5R1Q15078 307 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 TMUB2Q71RG4 321 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 RANBP3LQ86VV4 465 aaPredicted RBP16.29■□□□□ 0.2
RAB40C-205ENST00000539661 PDZD9Q8IXQ8 264 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 IZUMO1Q8IYV9 350 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 LINC00518Q8N0U6 118 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 HDDC3Q8N4P3 179 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 MYLIPQ8WY64 445 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 ORAI3Q9BRQ5 295 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 MENTQ9BUN1 341 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 AICDAQ9GZX7 198 aa16.29■□□□□ 0.2
RAB40C-205ENST00000539661 MRPL15Q9P015 296 aaKnown RBP16.29■□□□□ 0.2
RAB40C-205ENST00000539661 PPM1DO15297 605 aa16.28■□□□□ 0.2
RAB40C-205ENST00000539661 POU3F2P20265 443 aaPredicted RBP16.28■□□□□ 0.2
RAB40C-205ENST00000539661 GDI2P50395 445 aaKnown RBP16.28■□□□□ 0.2
RAB40C-205ENST00000539661 PDX1P52945 283 aa16.28■□□□□ 0.2
RAB40C-205ENST00000539661 GK2Q14410 553 aaPredicted RBP16.28■□□□□ 0.2
RAB40C-205ENST00000539661 CEBPEQ15744 281 aa16.28■□□□□ 0.2
RAB40C-205ENST00000539661 SLC48A1Q6P1K1 146 aa16.28■□□□□ 0.2
RAB40C-205ENST00000539661 FAM199XQ6PEV8 388 aaPredicted RBP16.28■□□□□ 0.2
RAB40C-205ENST00000539661 FRRS1Q6ZNA5 592 aa16.28■□□□□ 0.2
RAB40C-205ENST00000539661 SYS1Q8N2H4 156 aa16.28■□□□□ 0.2
RAB40C-205ENST00000539661 CYB5D2Q8WUJ1 264 aa16.28■□□□□ 0.2
RAB40C-205ENST00000539661 IRF7Q92985 503 aa16.28■□□□□ 0.2
RAB40C-205ENST00000539661 ZNF416Q9BWM5 594 aa16.28■□□□□ 0.2
RAB40C-205ENST00000539661 SLC46A2Q9BY10 475 aa16.28■□□□□ 0.2
RAB40C-205ENST00000539661 MS4A7Q9GZW8 240 aaPredicted RBP16.28■□□□□ 0.2
RAB40C-205ENST00000539661 EQTNQ9NQ60 294 aa16.28■□□□□ 0.2
RAB40C-205ENST00000539661 CES1P1Q9UKY3 287 aa16.28■□□□□ 0.2
RAB40C-205ENST00000539661 ZNF879B4DU55 563 aa16.28■□□□□ 0.2
RAB40C-205ENST00000539661 FCMRO60667 390 aa16.28■□□□□ 0.2
RAB40C-205ENST00000539661 KHDRBS3O75525 346 aaKnown RBP16.28■□□□□ 0.2
RAB40C-205ENST00000539661 IL9P15248 144 aa16.28■□□□□ 0.2
RAB40C-205ENST00000539661 MAKP20794 623 aa16.28■□□□□ 0.2
RAB40C-205ENST00000539661 MAPK3P27361 379 aaPredicted RBP16.28■□□□□ 0.2
RAB40C-205ENST00000539661 MC3RP41968 323 aa16.28■□□□□ 0.2
RAB40C-205ENST00000539661 DLX5P56178 289 aa16.28■□□□□ 0.2
RAB40C-205ENST00000539661 ACTA2P62736 377 aa16.28■□□□□ 0.2
RAB40C-205ENST00000539661 ACTG2P63267 376 aa16.28■□□□□ 0.2
RAB40C-205ENST00000539661 ZMYND11Q15326 602 aa16.28■□□□□ 0.2
RAB40C-205ENST00000539661 ZNF750Q32MQ0 723 aa16.28■□□□□ 0.2
RAB40C-205ENST00000539661 OR5M10Q6IEU7 315 aa16.28■□□□□ 0.2
RAB40C-205ENST00000539661 ALKAL2Q6UX46 152 aa16.28■□□□□ 0.2
RAB40C-205ENST00000539661 ADAMTS15Q8TE58 950 aa16.28■□□□□ 0.2
RAB40C-205ENST00000539661 C15orf40Q8WUR7 153 aa16.28■□□□□ 0.2
RAB40C-205ENST00000539661 PNPLA2Q96AD5 504 aa16.28■□□□□ 0.2
RAB40C-205ENST00000539661 MRI1Q9BV20 369 aa16.28■□□□□ 0.2
RAB40C-205ENST00000539661 ENKD1Q9H0I2 346 aa16.28■□□□□ 0.2
RAB40C-205ENST00000539661 PCDHB16Q9NRJ7 776 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms