RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 GJE1A6NN92 205 aa20.39■□□□□ 0.85
SFSWAP-204ENST00000535399 C19orf84I3L1E1 186 aa20.39■□□□□ 0.85
SFSWAP-204ENST00000535399 AIM2O14862 343 aa20.39■□□□□ 0.85
SFSWAP-204ENST00000535399 CXCL13O43927 109 aa20.39■□□□□ 0.85
SFSWAP-204ENST00000535399 PRG2P13727 222 aa20.39■□□□□ 0.85
SFSWAP-204ENST00000535399 APOBEC1P41238 236 aaKnown RBP20.39■□□□□ 0.85
SFSWAP-204ENST00000535399 TFF3Q07654 80 aa20.39■□□□□ 0.85
SFSWAP-204ENST00000535399 FOXF2Q12947 444 aa20.39■□□□□ 0.85
SFSWAP-204ENST00000535399 SGCBQ16585 318 aa20.39■□□□□ 0.85
SFSWAP-204ENST00000535399 VMACQ2NL98 169 aa20.39■□□□□ 0.85
SFSWAP-204ENST00000535399 SLC25A35Q3KQZ1 300 aa20.39■□□□□ 0.85
SFSWAP-204ENST00000535399 C3orf33Q6P1S2 294 aa20.39■□□□□ 0.85
SFSWAP-204ENST00000535399 ZNF550Q7Z398 422 aa20.39■□□□□ 0.85
SFSWAP-204ENST00000535399 OSTF1Q92882 214 aa20.39■□□□□ 0.85
SFSWAP-204ENST00000535399 SLC35B4Q969S0 331 aa20.39■□□□□ 0.85
SFSWAP-204ENST00000535399 ZNF607Q96SK3 696 aa20.39■□□□□ 0.85
SFSWAP-204ENST00000535399 ECSITQ9BQ95 431 aa20.39■□□□□ 0.85
SFSWAP-204ENST00000535399 COQ10BQ9H8M1 238 aa20.39■□□□□ 0.85
SFSWAP-204ENST00000535399 KCNJ16Q9NPI9 418 aa20.39■□□□□ 0.85
SFSWAP-204ENST00000535399 SERINC1Q9NRX5 453 aa20.39■□□□□ 0.85
SFSWAP-204ENST00000535399 PRDM4Q9UKN5 801 aa20.39■□□□□ 0.85
SFSWAP-204ENST00000535399 FRS3O43559 492 aa20.38■□□□□ 0.85
SFSWAP-204ENST00000535399 TPST1O60507 370 aa20.38■□□□□ 0.85
SFSWAP-204ENST00000535399 SHOX2O60902 331 aaPredicted RBP20.38■□□□□ 0.85
SFSWAP-204ENST00000535399 AQP8O94778 261 aa20.38■□□□□ 0.85
SFSWAP-204ENST00000535399 MFN2O95140 757 aa20.38■□□□□ 0.85
SFSWAP-204ENST00000535399 IL18BPO95998 194 aa20.38■□□□□ 0.85
SFSWAP-204ENST00000535399 PRDX6P30041 224 aa20.38■□□□□ 0.85
SFSWAP-204ENST00000535399 SLC1A3P43003 542 aa20.38■□□□□ 0.85
SFSWAP-204ENST00000535399 CARD18P57730 90 aa20.38■□□□□ 0.85
SFSWAP-204ENST00000535399 DMTNQ08495 405 aa20.38■□□□□ 0.85
SFSWAP-204ENST00000535399 PDSS1Q5T2R2 415 aa20.38■□□□□ 0.85
SFSWAP-204ENST00000535399 ADGRG3Q86Y34 549 aa20.38■□□□□ 0.85
SFSWAP-204ENST00000535399 SLC30A8Q8IWU4 369 aa20.38■□□□□ 0.85
SFSWAP-204ENST00000535399 GCNT2Q8N0V5 402 aa20.38■□□□□ 0.85
SFSWAP-204ENST00000535399 INTS12Q96CB8 462 aaKnown RBP20.38■□□□□ 0.85
SFSWAP-204ENST00000535399 CMTM5Q96DZ9 223 aa20.38■□□□□ 0.85
SFSWAP-204ENST00000535399 ZNF583Q96ND8 569 aa20.38■□□□□ 0.85
SFSWAP-204ENST00000535399 SRXN1Q9BYN0 137 aa20.38■□□□□ 0.85
SFSWAP-204ENST00000535399 RNF122Q9H9V4 155 aa20.38■□□□□ 0.85
SFSWAP-204ENST00000535399 USP22Q9UPT9 525 aa20.38■□□□□ 0.85
SFSWAP-204ENST00000535399 ARHGAP21Q5T5U3 1957 aa20.37■□□□□ 0.85
SFSWAP-204ENST00000535399 PRORSD1PA6NEY8 169 aa20.37■□□□□ 0.85
SFSWAP-204ENST00000535399 DVL2O14641 736 aa20.37■□□□□ 0.85
SFSWAP-204ENST00000535399 SERPINB7O75635 380 aa20.37■□□□□ 0.85
SFSWAP-204ENST00000535399 UQCRBP14927 111 aa20.37■□□□□ 0.85
SFSWAP-204ENST00000535399 BMP5P22003 454 aa20.37■□□□□ 0.85
SFSWAP-204ENST00000535399 HTR3AP46098 478 aa20.37■□□□□ 0.85
SFSWAP-204ENST00000535399 AGFG1P52594 562 aaKnown RBP20.37■□□□□ 0.85
SFSWAP-204ENST00000535399 GLIPR1L2Q4G1C9 344 aa20.37■□□□□ 0.85
SFSWAP-204ENST00000535399 SP5Q6BEB4 398 aaPredicted RBP20.37■□□□□ 0.85
SFSWAP-204ENST00000535399 C8orf82Q6P1X6 216 aaPredicted RBP20.37■□□□□ 0.85
SFSWAP-204ENST00000535399 HACD2Q6Y1H2 254 aa20.37■□□□□ 0.85
SFSWAP-204ENST00000535399 ARMC8Q8IUR7 673 aa20.37■□□□□ 0.85
SFSWAP-204ENST00000535399 REXO5Q96IC2 774 aaKnown RBP20.37■□□□□ 0.85
SFSWAP-204ENST00000535399 ADAM19Q9H013 955 aa20.37■□□□□ 0.85
SFSWAP-204ENST00000535399 EFCAB1Q9HAE3 211 aa20.37■□□□□ 0.85
SFSWAP-204ENST00000535399 CHST11Q9NPF2 352 aa20.37■□□□□ 0.85
SFSWAP-204ENST00000535399 CHRNA9Q9UGM1 479 aa20.37■□□□□ 0.85
SFSWAP-204ENST00000535399 OSGIN1Q9UJX0 560 aa20.37■□□□□ 0.85
SFSWAP-204ENST00000535399 SETXQ7Z333 2677 aaKnown RBP20.37■□□□□ 0.85
SFSWAP-204ENST00000535399 CACNA1CQ13936 2221 aa20.37■□□□□ 0.85
SFSWAP-204ENST00000535399 A0A1W2PNR3 127 aa20.36■□□□□ 0.85
SFSWAP-204ENST00000535399 M0QX08 132 aa20.36■□□□□ 0.85
SFSWAP-204ENST00000535399 FAM107AO95990 144 aa20.36■□□□□ 0.85
SFSWAP-204ENST00000535399 TACR3P29371 465 aa20.36■□□□□ 0.85
SFSWAP-204ENST00000535399 OPRM1P35372 400 aa20.36■□□□□ 0.85
SFSWAP-204ENST00000535399 POLR2HP52434 150 aaKnown RBP20.36■□□□□ 0.85
SFSWAP-204ENST00000535399 HOXC5Q00444 222 aa20.36■□□□□ 0.85
SFSWAP-204ENST00000535399 SYT14P1Q58G82 188 aa20.36■□□□□ 0.85
SFSWAP-204ENST00000535399 OR2A2Q6IF42 318 aa20.36■□□□□ 0.85
SFSWAP-204ENST00000535399 LSRQ86X29 649 aaPredicted RBP20.36■□□□□ 0.85
SFSWAP-204ENST00000535399 SLC15A3Q8IY34 581 aa20.36■□□□□ 0.85
SFSWAP-204ENST00000535399 ANKS4BQ8N8V4 417 aa20.36■□□□□ 0.85
SFSWAP-204ENST00000535399 SLC25A43Q8WUT9 341 aaPredicted RBP20.36■□□□□ 0.85
SFSWAP-204ENST00000535399 SFXN3Q9BWM7 321 aa20.36■□□□□ 0.85
SFSWAP-204ENST00000535399 NPDC1Q9NQX5 325 aaPredicted RBP20.36■□□□□ 0.85
SFSWAP-204ENST00000535399 CMTM6Q9NX76 183 aa20.36■□□□□ 0.85
SFSWAP-204ENST00000535399 ADAM21Q9UKJ8 722 aa20.36■□□□□ 0.85
SFSWAP-204ENST00000535399 MCTS1Q9ULC4 181 aaKnown RBP20.36■□□□□ 0.85
SFSWAP-204ENST00000535399 DOCK7Q96N67 2140 aa20.35■□□□□ 0.85
SFSWAP-204ENST00000535399 TMED7-TICAM2A0A0A6YYA0 188 aa20.35■□□□□ 0.85
SFSWAP-204ENST00000535399 A0A1W2PNV4 684 aa20.35■□□□□ 0.85
SFSWAP-204ENST00000535399 CCT8L1PA6NM43 557 aa20.35■□□□□ 0.85
SFSWAP-204ENST00000535399 TNFSF13O75888 250 aa20.35■□□□□ 0.85
SFSWAP-204ENST00000535399 SYNGR4O95473 234 aa20.35■□□□□ 0.85
SFSWAP-204ENST00000535399 CRHP06850 196 aa20.35■□□□□ 0.85
SFSWAP-204ENST00000535399 FCGR2AP12318 317 aa20.35■□□□□ 0.85
SFSWAP-204ENST00000535399 SLC7A1P30825 629 aa20.35■□□□□ 0.85
SFSWAP-204ENST00000535399 GUSBP1Q15486 140 aa20.35■□□□□ 0.85
SFSWAP-204ENST00000535399 INTS11Q5TA45 600 aaKnown RBP20.35■□□□□ 0.85
SFSWAP-204ENST00000535399 WBP2NLQ6ICG8 309 aa20.35■□□□□ 0.85
SFSWAP-204ENST00000535399 CCDC80Q76M96 950 aa20.35■□□□□ 0.85
SFSWAP-204ENST00000535399 ARPINQ7Z6K5 226 aa20.35■□□□□ 0.85
SFSWAP-204ENST00000535399 PATL1Q86TB9 770 aaKnown RBP20.35■□□□□ 0.85
SFSWAP-204ENST00000535399 CADM2Q8N3J6 435 aa20.35■□□□□ 0.85
SFSWAP-204ENST00000535399 SMYD1Q8NB12 490 aa20.35■□□□□ 0.85
SFSWAP-204ENST00000535399 ACBD4Q8NC06 268 aa20.35■□□□□ 0.85
SFSWAP-204ENST00000535399 BHLHE22Q8NFJ8 381 aaPredicted RBP20.35■□□□□ 0.85
SFSWAP-204ENST00000535399 OR5B2Q96R09 309 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms