RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 IL4RP24394 825 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 DPP4P27487 766 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 OTX2P32243 289 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 DRD3P35462 400 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 ATP5C1P36542 298 aaKnown RBP4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 ACADSBP45954 432 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 MSLNQ13421 630 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 SQLEQ14534 574 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 IZUMO4Q1ZYL8 232 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 LRRC37A5PQ49AS3 106 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 C9orf64Q5T6V5 341 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 SEL1L3Q68CR1 1132 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 LEKR1Q6ZMV7 388 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 RGS9BPQ6ZS82 235 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 Q6ZS92 163 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 TMEM26Q6ZUK4 368 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 CDC20BQ86Y33 519 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 PDCL2Q8N4E4 241 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 TCEANCQ8N8B7 351 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 MINDY2Q8NBR6 621 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 ACBD4Q8NC06 268 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 OR4D9Q8NGE8 314 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 OR10G8Q8NGN5 311 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 OR1L3Q8NH93 324 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 HPSE2Q8WWQ2 592 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 FCAMRQ8WWV6 532 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 PHYHIPQ92561 330 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 DTNBP1Q96EV8 351 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 RBM18Q96H35 190 aaKnown RBP4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 MAGED4Q96JG8 741 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 ELMO2Q96JJ3 720 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 ZNF778Q96MU6 729 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 AGPAT1Q99943 283 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 SYT15Q9BQS2 421 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 POLR1EQ9GZS1 481 aaKnown RBP4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 THAP2Q9H0W7 228 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 ZNF665Q9H7R5 613 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 UBE2TQ9NPD8 197 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 IL20RAQ9UHF4 553 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 PCDHGB1Q9Y5G3 927 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 VWFP04275 2813 aa4.06□□□□□ -1.76
HMGB1P23-201ENST00000518743 TTC41PQ6P2S7 1318 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 A0A087WZ39 114 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 NKX2-6A6NCS4 301 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 SNURFLB1AK76 121 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 C10orf142B7Z368 130 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 C21orf140B9A014 251 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 PIRO00625 290 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 SLC22A2O15244 555 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 B4GAT1O43505 415 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 FGF17O60258 216 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 KLHL41O60662 606 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 SLC19A2O60779 497 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 EML2O95834 649 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 TSHBP01222 138 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 PRSS1P07477 247 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 GSTA1P08263 222 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 CLTAP09496 248 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 FRMD6-AS1P0C7T7 363 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 THRAP10827 490 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 B4GALT1P15291 398 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 FUT1P19526 365 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 GIFP27352 417 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 PSMA5P28066 241 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 PTPN4P29074 926 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 GNA11P29992 359 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 TSFMP43897 325 aaKnown RBP4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 OR3A2P47893 321 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 HNMTP50135 292 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 ABCE1P61221 599 aaKnown RBP4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 ELAVL3Q14576 367 aaKnown RBP4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 EXOSC7Q15024 291 aaKnown RBP4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 C3AR1Q16581 482 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 DUSP5Q16690 384 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 KIAA1644Q3SXP7 199 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 FAM106AQ4KMX7 169 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 RFTN2Q52LD8 501 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 SLC25A53Q5H9E4 307 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 WDR38Q5JTN6 314 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 C10orf120Q5SQS8 335 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 TPRG1LQ5T0D9 272 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 SPATA46Q5T0L3 261 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 AWAT2Q6E213 333 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 WBP2NLQ6ICG8 309 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 ASRGL1Q7L266 308 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 GOLGA7Q7Z5G4 137 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 ZC3H3Q8IXZ2 948 aaKnown RBP4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 FADS6Q8N9I5 356 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 MLKLQ8NB16 471 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 OR4L1Q8NH43 312 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 RDH11Q8TC12 318 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 CCDC12Q8WUD4 166 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 NUDCD2Q8WVJ2 157 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 MARK4Q96L34 752 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 BMFQ96LC9 184 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 C10orf90Q96M02 699 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 WDR76Q9H967 626 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 DYRK4Q9NR20 520 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 TMEM9Q9P0T7 183 aa4.05□□□□□ -1.76
HMGB1P23-201ENST00000518743 TAAR2Q9P1P5 351 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms