RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 MUCL1Q96DR8 90 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 ZHX1-C8orf76Q96EF9 292 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 PERPQ96FX8 193 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 HS6ST2Q96MM7 605 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 ATOH8Q96SQ7 321 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 PAFAH2Q99487 392 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 TUBA1CQ9BQE3 449 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 WDR83Q9BRX9 315 aaKnown RBP3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 NTMT1Q9BV86 223 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 PINK1Q9BXM7 581 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 HDHD5Q9BXW7 423 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 ZNF717Q9BY31 904 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 NXF5Q9H1B4 397 aaKnown RBP3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 TOR3AQ9H497 397 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 ESRP2Q9H6T0 727 aaKnown RBP3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 EML4Q9HC35 981 aaKnown RBP3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 MID1IP1Q9NPA3 183 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 SLC35C2Q9NQQ7 365 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 SERINC1Q9NRX5 453 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 GLRX2Q9NS18 164 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 TBC1D23Q9NUY8 699 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 ATAD3AQ9NVI7 634 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 KLHL28Q9NXS3 571 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 SH3BP4Q9P0V3 963 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 GRID1Q9ULK0 1009 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 FAF1Q9UNN5 650 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 ABCG2Q9UNQ0 655 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 WBP11Q9Y2W2 641 aaKnown RBP3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 PLLPQ9Y342 182 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 ASB4Q9Y574 426 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 AP4B1Q9Y6B7 739 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 APCP25054 2843 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 A0A087WZY1 265 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 LOC102723971A0A1B0GUV8 181 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 A0A1W2PNV4 684 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 FAM234BA2RU67 622 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 LRRC3CA6NJW4 275 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 RAB27BO00194 218 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 SLC28A1O00337 649 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 MANBAO00462 879 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 COPEO14579 308 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 MPPED1O15442 326 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 CLOCKO15516 846 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 EMC8O43402 210 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 TMCC2O75069 709 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 UGT2B11O75310 529 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 KRT33AO76009 404 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 WISP2O76076 250 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 OR4F21O95013 312 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 MT-ND5P03915 603 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 TUBBP07437 444 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 ERCC1P07992 297 aaPredicted RBP3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 IL3P08700 152 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 ALOX5P09917 674 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 PRPS2P11908 318 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 TSPAN8P19075 237 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 PCSK6P29122 969 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 TIA1P31483 386 aaKnown RBP eCLIP3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 GABRA3P34903 492 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 EVI2BP34910 448 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 IDUAP35475 653 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 EIF1P41567 113 aaKnown RBP3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 ASMTP46597 345 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 STARP49675 285 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 CCR4P51679 360 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 ZNF136P52737 540 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 CDH13P55290 713 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 ATP5J2P56134 94 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 CLDN15P56746 228 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 GPX6P59796 221 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 RPS4XP62701 263 aaKnown RBP3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 HMGCS1Q01581 520 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 TFF3Q07654 80 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 ZNF763Q0D2J5 394 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 HSPB3Q12988 150 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 VEZF1Q14119 521 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 SLC29A2Q14542 456 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 PON3Q15166 354 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 RNPS1Q15287 305 aaKnown RBP3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 ETFDHQ16134 617 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 ACKR1Q16570 336 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 PRICKLE4Q2TBC4 344 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 KRTAP21-3Q3LHN1 58 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 CCDC153Q494R4 210 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 GGTA1PQ4G0N0 100 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 TRMT12Q53H54 448 aaKnown RBP3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 TECRLQ5HYJ1 363 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 HBMQ6B0K9 141 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 KLHL17Q6TDP4 642 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 KLHL24Q6TFL4 600 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 TMEM107Q6UX40 140 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 DGAT2L6Q6ZPD8 337 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 IKBIPQ70UQ0 350 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 Q71RC1 249 aaPredicted RBP3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 TRMT10CQ7L0Y3 403 aaKnown RBP3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 KCTD20Q7Z5Y7 419 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 EXOC3L1Q86VI1 746 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 CHERPQ8IWX8 916 aaKnown RBP3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 DDIASQ8IXT1 998 aa3.38□□□□□ -1.87
HMGN1P11-201ENST00000508668 SLC15A3Q8IY34 581 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms