RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 NCALDP61601 193 aa13.49□□□□□ -0.25
RNF4-210ENST00000508235 KRT72Q14CN4 511 aa13.49□□□□□ -0.25
RNF4-210ENST00000508235 PON3Q15166 354 aa13.49□□□□□ -0.25
RNF4-210ENST00000508235 CTU2Q2VPK5 515 aaKnown RBP13.49□□□□□ -0.25
RNF4-210ENST00000508235 TMEM176BQ3YBM2 270 aaPredicted RBP13.49□□□□□ -0.25
RNF4-210ENST00000508235 WBP2NLQ6ICG8 309 aa13.49□□□□□ -0.25
RNF4-210ENST00000508235 C8orf82Q6P1X6 216 aaPredicted RBP13.49□□□□□ -0.25
RNF4-210ENST00000508235 CCDC80Q76M96 950 aa13.49□□□□□ -0.25
RNF4-210ENST00000508235 SLC15A3Q8IY34 581 aa13.49□□□□□ -0.25
RNF4-210ENST00000508235 ATP6V1C2Q8NEY4 427 aa13.49□□□□□ -0.25
RNF4-210ENST00000508235 TNIP2Q8NFZ5 429 aa13.49□□□□□ -0.25
RNF4-210ENST00000508235 OR10D3Q8NH80 312 aa13.49□□□□□ -0.25
RNF4-210ENST00000508235 OR2V1Q8NHB1 315 aa13.49□□□□□ -0.25
RNF4-210ENST00000508235 BCAS4Q8TDM0 211 aa13.49□□□□□ -0.25
RNF4-210ENST00000508235 CPNE4Q96A23 557 aaPredicted RBP13.49□□□□□ -0.25
RNF4-210ENST00000508235 PRRG4Q9BZD6 226 aa13.49□□□□□ -0.25
RNF4-210ENST00000508235 TMEM185BQ9H7F4 350 aa13.49□□□□□ -0.25
RNF4-210ENST00000508235 SPAG4Q9NPE6 437 aa13.49□□□□□ -0.25
RNF4-210ENST00000508235 Q9UFV3 132 aa13.49□□□□□ -0.25
RNF4-210ENST00000508235 CHST2Q9Y4C5 530 aa13.49□□□□□ -0.25
RNF4-210ENST00000508235 KLF2Q9Y5W3 355 aaPredicted RBP13.49□□□□□ -0.25
RNF4-210ENST00000508235 DOCK7Q96N67 2140 aa13.49□□□□□ -0.25
RNF4-210ENST00000508235 A0A0J9YW62 118 aa13.48□□□□□ -0.25
RNF4-210ENST00000508235 ELOVL7A1L3X0 281 aa13.48□□□□□ -0.25
RNF4-210ENST00000508235 DVL2O14641 736 aa13.48□□□□□ -0.25
RNF4-210ENST00000508235 EFNA2O43921 213 aa13.48□□□□□ -0.25
RNF4-210ENST00000508235 TOXO94900 526 aa13.48□□□□□ -0.25
RNF4-210ENST00000508235 RCBTB2O95199 551 aa13.48□□□□□ -0.25
RNF4-210ENST00000508235 CTSSP25774 331 aa13.48□□□□□ -0.25
RNF4-210ENST00000508235 OPRM1P35372 400 aa13.48□□□□□ -0.25
RNF4-210ENST00000508235 CLK1P49759 484 aaKnown RBP13.48□□□□□ -0.25
RNF4-210ENST00000508235 SLC7A2P52569 658 aa13.48□□□□□ -0.25
RNF4-210ENST00000508235 LIPEQ05469 1076 aa13.48□□□□□ -0.25
RNF4-210ENST00000508235 DMTNQ08495 405 aa13.48□□□□□ -0.25
RNF4-210ENST00000508235 SLC25A35Q3KQZ1 300 aa13.48□□□□□ -0.25
RNF4-210ENST00000508235 SYT14P1Q58G82 188 aa13.48□□□□□ -0.25
RNF4-210ENST00000508235 GTF2IRD2BQ6EKJ0 949 aa13.48□□□□□ -0.25
RNF4-210ENST00000508235 POMZP3Q6PJE2 187 aa13.48□□□□□ -0.25
RNF4-210ENST00000508235 MAMDC2Q7Z304 686 aaPredicted RBP13.48□□□□□ -0.25
RNF4-210ENST00000508235 GTF2IRD2Q86UP8 949 aa13.48□□□□□ -0.25
RNF4-210ENST00000508235 RANBP3LQ86VV4 465 aaPredicted RBP13.48□□□□□ -0.25
RNF4-210ENST00000508235 MICU2Q8IYU8 434 aa13.48□□□□□ -0.25
RNF4-210ENST00000508235 CADM2Q8N3J6 435 aa13.48□□□□□ -0.25
RNF4-210ENST00000508235 LILRB4Q8NHJ6 448 aa13.48□□□□□ -0.25
RNF4-210ENST00000508235 OSTF1Q92882 214 aa13.48□□□□□ -0.25
RNF4-210ENST00000508235 ZNF524Q96C55 264 aa13.48□□□□□ -0.25
RNF4-210ENST00000508235 ADGRG7Q96K78 797 aa13.48□□□□□ -0.25
RNF4-210ENST00000508235 ALG2Q9H553 416 aa13.48□□□□□ -0.25
RNF4-210ENST00000508235 CTPS2Q9NRF8 586 aa13.48□□□□□ -0.25
RNF4-210ENST00000508235 CMTM6Q9NX76 183 aa13.48□□□□□ -0.25
RNF4-210ENST00000508235 RPS6KB2Q9UBS0 482 aa13.48□□□□□ -0.25
RNF4-210ENST00000508235 ZNF629Q9UEG4 869 aaPredicted RBP13.48□□□□□ -0.25
RNF4-210ENST00000508235 TESQ9UGI8 421 aaKnown RBP13.48□□□□□ -0.25
RNF4-210ENST00000508235 GCN1Q92616 2671 aaKnown RBP13.47□□□□□ -0.25
RNF4-210ENST00000508235 TMED7-TICAM2A0A0A6YYA0 188 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 CCT8L1PA6NM43 557 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 H0YC42 278 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 ZNF208O43345 1280 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 TPST1O60507 370 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 GCM2O75603 506 aaPredicted RBP13.47□□□□□ -0.25
RNF4-210ENST00000508235 IL18BPO95998 194 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 OPN1LWP04000 364 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 CRHP06850 196 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 TMIGD3P0DMS9 266 aaPredicted RBP13.47□□□□□ -0.25
RNF4-210ENST00000508235 TACR3P29371 465 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 CPA2P48052 419 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 KCNJ5P48544 419 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 TPD52P55327 224 aaPredicted RBP13.47□□□□□ -0.25
RNF4-210ENST00000508235 RGS8P57771 180 aaPredicted RBP13.47□□□□□ -0.25
RNF4-210ENST00000508235 PSME3P61289 254 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 MXRA7P84157 204 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 C16orf89Q6UX73 402 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 ADGRG3Q86Y34 549 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 CCDC71Q8IV32 467 aaPredicted RBP13.47□□□□□ -0.25
RNF4-210ENST00000508235 PGAM4Q8N0Y7 254 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 FITM2Q8N6M3 262 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 C9orf106Q8NAJ2 232 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 SMYD1Q8NB12 490 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 DDIT4LQ96D03 193 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 LRRC46Q96FV0 321 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 ZNF845Q96IR2 970 aaPredicted RBP13.47□□□□□ -0.25
RNF4-210ENST00000508235 OR5B2Q96R09 309 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 SFXN3Q9BWM7 321 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 TRIM2Q9C040 744 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 ADAM19Q9H013 955 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 CHST11Q9NPF2 352 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 ARL8BQ9NVJ2 186 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 ABCD2Q9UBJ2 740 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 OSGIN1Q9UJX0 560 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 BAG5Q9UL15 447 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 TMED7Q9Y3B3 224 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 HDGFL3Q9Y3E1 203 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 KIAA1549Q9HCM3 1950 aa13.47□□□□□ -0.25
RNF4-210ENST00000508235 A1L4Q6 167 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 KDM4EB2RXH2 506 aaPredicted RBP13.46□□□□□ -0.25
RNF4-210ENST00000508235 NME4O00746 187 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 GSTA4O15217 222 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 CXCL13O43927 109 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 TGM6O95932 706 aa13.46□□□□□ -0.25
RNF4-210ENST00000508235 LGI1O95970 557 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms