RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 ZNF724A8MTY0 619 aa17.5■□□□□ 0.39
SFXN1-203ENST00000502393 ZNF814B7Z6K7 855 aa17.5■□□□□ 0.39
SFXN1-203ENST00000502393 SULT2B1O00204 365 aa17.5■□□□□ 0.39
SFXN1-203ENST00000502393 HMGN4O00479 90 aa17.5■□□□□ 0.39
SFXN1-203ENST00000502393 SDHDO14521 159 aa17.5■□□□□ 0.39
SFXN1-203ENST00000502393 NME5P56597 212 aa17.5■□□□□ 0.39
SFXN1-203ENST00000502393 UFM1P61960 85 aa17.5■□□□□ 0.39
SFXN1-203ENST00000502393 KCNJ10P78508 379 aa17.5■□□□□ 0.39
SFXN1-203ENST00000502393 GPAT3Q53EU6 434 aa17.5■□□□□ 0.39
SFXN1-203ENST00000502393 ZNF563Q8TA94 476 aa17.5■□□□□ 0.39
SFXN1-203ENST00000502393 TMEM171Q8WVE6 324 aa17.5■□□□□ 0.39
SFXN1-203ENST00000502393 ZBTB9Q96C00 473 aa17.5■□□□□ 0.39
SFXN1-203ENST00000502393 ZG16BQ96DA0 208 aa17.5■□□□□ 0.39
SFXN1-203ENST00000502393 TRNT1Q96Q11 434 aaKnown RBP17.5■□□□□ 0.39
SFXN1-203ENST00000502393 PANX1Q96RD7 426 aa17.5■□□□□ 0.39
SFXN1-203ENST00000502393 BDH2Q9BUT1 245 aa17.5■□□□□ 0.39
SFXN1-203ENST00000502393 CCDC106Q9BWC9 280 aa17.5■□□□□ 0.39
SFXN1-203ENST00000502393 CXorf56Q9H5V9 222 aa17.5■□□□□ 0.39
SFXN1-203ENST00000502393 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.5■□□□□ 0.39
SFXN1-203ENST00000502393 THAP1Q9NVV9 213 aa17.5■□□□□ 0.39
SFXN1-203ENST00000502393 LIPT1Q9Y234 373 aa17.5■□□□□ 0.39
SFXN1-203ENST00000502393 HEATR5AQ86XA9 2040 aa17.49■□□□□ 0.39
SFXN1-203ENST00000502393 PRAMEF27A3QJZ7 478 aa17.49■□□□□ 0.39
SFXN1-203ENST00000502393 CCDC154A6NI56 674 aa17.49■□□□□ 0.39
SFXN1-203ENST00000502393 TRPC5OSA6NMA1 111 aa17.49■□□□□ 0.39
SFXN1-203ENST00000502393 HDAC3O15379 428 aa17.49■□□□□ 0.39
SFXN1-203ENST00000502393 BCAS1O75363 584 aaPredicted RBP17.49■□□□□ 0.39
SFXN1-203ENST00000502393 PGRP06401 933 aa17.49■□□□□ 0.39
SFXN1-203ENST00000502393 PTH2RP49190 550 aa17.49■□□□□ 0.39
SFXN1-203ENST00000502393 ANXA11P50995 505 aaKnown RBP17.49■□□□□ 0.39
SFXN1-203ENST00000502393 CHRNEQ04844 493 aa17.49■□□□□ 0.39
SFXN1-203ENST00000502393 LTBQ06643 244 aa17.49■□□□□ 0.39
SFXN1-203ENST00000502393 TSC22D1Q15714 1073 aa17.49■□□□□ 0.39
SFXN1-203ENST00000502393 TAB1Q15750 504 aa17.49■□□□□ 0.39
SFXN1-203ENST00000502393 ALKBH2Q6NS38 261 aa17.49■□□□□ 0.39
SFXN1-203ENST00000502393 ADAM5Q6NVV9 412 aa17.49■□□□□ 0.39
SFXN1-203ENST00000502393 CLEC9AQ6UXN8 241 aa17.49■□□□□ 0.39
SFXN1-203ENST00000502393 GRINAQ7Z429 371 aa17.49■□□□□ 0.39
SFXN1-203ENST00000502393 MTDHQ86UE4 582 aaKnown RBP17.49■□□□□ 0.39
SFXN1-203ENST00000502393 RNF130Q86XS8 419 aa17.49■□□□□ 0.39
SFXN1-203ENST00000502393 ARFGAP2Q8N6H7 521 aa17.49■□□□□ 0.39
SFXN1-203ENST00000502393 ANKRD42Q8N9B4 389 aa17.49■□□□□ 0.39
SFXN1-203ENST00000502393 AKAP1Q92667 903 aaKnown RBP eCLIP17.49■□□□□ 0.39
SFXN1-203ENST00000502393 ZNF75CPQ92670 426 aaPredicted RBP17.49■□□□□ 0.39
SFXN1-203ENST00000502393 COX4I2Q96KJ9 171 aa17.49■□□□□ 0.39
SFXN1-203ENST00000502393 ESRP2Q9H6T0 727 aaKnown RBP17.49■□□□□ 0.39
SFXN1-203ENST00000502393 CTPS2Q9NRF8 586 aa17.49■□□□□ 0.39
SFXN1-203ENST00000502393 CHRNA9Q9UGM1 479 aa17.49■□□□□ 0.39
SFXN1-203ENST00000502393 GPR45Q9Y5Y3 372 aa17.49■□□□□ 0.39
SFXN1-203ENST00000502393 SNNO75324 88 aaPredicted RBP17.48■□□□□ 0.39
SFXN1-203ENST00000502393 CNOT4O95628 575 aaKnown RBP17.48■□□□□ 0.39
SFXN1-203ENST00000502393 FESP07332 822 aa17.48■□□□□ 0.39
SFXN1-203ENST00000502393 EPHA3P29320 983 aa17.48■□□□□ 0.39
SFXN1-203ENST00000502393 IL12AP29459 219 aa17.48■□□□□ 0.39
SFXN1-203ENST00000502393 RYKP34925 604 aa17.48■□□□□ 0.39
SFXN1-203ENST00000502393 CLK1P49759 484 aaKnown RBP17.48■□□□□ 0.39
SFXN1-203ENST00000502393 WDR4P57081 412 aaKnown RBP17.48■□□□□ 0.39
SFXN1-203ENST00000502393 PDK3Q15120 406 aa17.48■□□□□ 0.39
SFXN1-203ENST00000502393 NCMAPQ5T1S8 102 aa17.48■□□□□ 0.39
SFXN1-203ENST00000502393 BHLHA15Q7RTS1 189 aaPredicted RBP17.48■□□□□ 0.39
SFXN1-203ENST00000502393 GALNT5Q7Z7M9 940 aa17.48■□□□□ 0.39
SFXN1-203ENST00000502393 CMIPQ8IY22 773 aa17.48■□□□□ 0.39
SFXN1-203ENST00000502393 GLB1L3Q8NCI6 653 aaPredicted RBP17.48■□□□□ 0.39
SFXN1-203ENST00000502393 RAB3IL1Q8TBN0 382 aa17.48■□□□□ 0.39
SFXN1-203ENST00000502393 ZHX1-C8orf76Q96EF9 292 aa17.48■□□□□ 0.39
SFXN1-203ENST00000502393 OR52E6Q96RD3 313 aa17.48■□□□□ 0.39
SFXN1-203ENST00000502393 ZNF300Q96RE9 604 aaPredicted RBP17.48■□□□□ 0.39
SFXN1-203ENST00000502393 ZBTB18Q99592 522 aa17.48■□□□□ 0.39
SFXN1-203ENST00000502393 POTEKPQ9BYX7 375 aa17.48■□□□□ 0.39
SFXN1-203ENST00000502393 ZNF701Q9NV72 531 aaPredicted RBP17.48■□□□□ 0.39
SFXN1-203ENST00000502393 EMC3Q9P0I2 261 aa17.48■□□□□ 0.39
SFXN1-203ENST00000502393 HDGFL3Q9Y3E1 203 aa17.48■□□□□ 0.39
SFXN1-203ENST00000502393 RNF115Q9Y4L5 304 aa17.48■□□□□ 0.39
SFXN1-203ENST00000502393 DSCAMO60469 2012 aa17.48■□□□□ 0.39
SFXN1-203ENST00000502393 IGKV3D-15A0A087WSY6 115 aa17.47■□□□□ 0.39
SFXN1-203ENST00000502393 TMEM120BA0PK00 339 aa17.47■□□□□ 0.39
SFXN1-203ENST00000502393 C9JVG2 144 aa17.47■□□□□ 0.39
SFXN1-203ENST00000502393 SLCO1B7G3V0H7 640 aa17.47■□□□□ 0.39
SFXN1-203ENST00000502393 H7C1Q1 480 aa17.47■□□□□ 0.39
SFXN1-203ENST00000502393 PMS2P2O95744 297 aa17.47■□□□□ 0.39
SFXN1-203ENST00000502393 HEXAP06865 529 aa17.47■□□□□ 0.39
SFXN1-203ENST00000502393 TFPIP10646 304 aa17.47■□□□□ 0.39
SFXN1-203ENST00000502393 SLC18A1P54219 525 aa17.47■□□□□ 0.39
SFXN1-203ENST00000502393 CAPRIN1Q14444 709 aaKnown RBP17.47■□□□□ 0.39
SFXN1-203ENST00000502393 SYPL1Q16563 259 aa17.47■□□□□ 0.39
SFXN1-203ENST00000502393 ABLIM2Q6H8Q1 611 aa17.47■□□□□ 0.39
SFXN1-203ENST00000502393 LRRC74BQ6ZQY2 392 aa17.47■□□□□ 0.39
SFXN1-203ENST00000502393 ZNF621Q6ZSS3 439 aa17.47■□□□□ 0.39
SFXN1-203ENST00000502393 SSX8Q7RTT4 187 aa17.47■□□□□ 0.39
SFXN1-203ENST00000502393 PMM1Q92871 262 aa17.47■□□□□ 0.39
SFXN1-203ENST00000502393 ZNF775Q96BV0 537 aaPredicted RBP17.47■□□□□ 0.39
SFXN1-203ENST00000502393 INPP5KQ9BT40 448 aa17.47■□□□□ 0.39
SFXN1-203ENST00000502393 SLC38A1Q9H2H9 487 aa17.47■□□□□ 0.39
SFXN1-203ENST00000502393 WDR55Q9H6Y2 383 aaPredicted RBP17.47■□□□□ 0.39
SFXN1-203ENST00000502393 MTHFD2LQ9H903 347 aaPredicted RBP17.47■□□□□ 0.39
SFXN1-203ENST00000502393 PRSS50Q9UI38 385 aa17.47■□□□□ 0.39
SFXN1-203ENST00000502393 GOLGA8QA0A0J9YX86 632 aa17.46■□□□□ 0.39
SFXN1-203ENST00000502393 GOLGA8OA6NCC3 632 aa17.46■□□□□ 0.39
SFXN1-203ENST00000502393 AGAP5A6NIR3 686 aa17.46■□□□□ 0.39
SFXN1-203ENST00000502393 CLDN24A6NM45 220 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms