RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 ADOQ96SZ5 270 aa9.41□□□□□ -0.9
HDAC3-214ENST00000495485 TSSK6Q9BXA6 273 aa9.41□□□□□ -0.9
HDAC3-214ENST00000495485 GPN2Q9H9Y4 310 aaPredicted RBP9.41□□□□□ -0.9
HDAC3-214ENST00000495485 SDHAF3Q9NRP4 125 aa9.41□□□□□ -0.9
HDAC3-214ENST00000495485 SLC22A11Q9NSA0 550 aa9.41□□□□□ -0.9
HDAC3-214ENST00000495485 CHCHD3Q9NX63 227 aaKnown RBP9.41□□□□□ -0.9
HDAC3-214ENST00000495485 TVP23BQ9NYZ1 205 aa9.41□□□□□ -0.9
HDAC3-214ENST00000495485 PTTG2Q9NZH5 202 aa9.41□□□□□ -0.9
HDAC3-214ENST00000495485 WARS2Q9UGM6 360 aaKnown RBP9.41□□□□□ -0.9
HDAC3-214ENST00000495485 PSORS1C1Q9UIG5 152 aa9.41□□□□□ -0.9
HDAC3-214ENST00000495485 NPFFR2Q9Y5X5 522 aa9.41□□□□□ -0.9
HDAC3-214ENST00000495485 CDH10Q9Y6N8 788 aa9.41□□□□□ -0.9
HDAC3-214ENST00000495485 COL6A6A6NMZ7 2263 aa9.41□□□□□ -0.9
HDAC3-214ENST00000495485 PMS2P1A4D2B8 440 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 ELOA3DA6NLF2 546 aaPredicted RBP9.4□□□□□ -0.9
HDAC3-214ENST00000495485 EFCAB9A8MZ26 197 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 ALG1L2C9J202 215 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 TERTO14746 1132 aaKnown RBP9.4□□□□□ -0.9
HDAC3-214ENST00000495485 XPNPEP2O43895 674 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 TSPAN2O60636 221 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 TIAF1O95411 115 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 SOX14O95416 240 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 CDK1P06493 297 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 ICAM2P13598 275 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 ZNF28P17035 718 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 GABRB1P18505 474 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 TCN2P20062 427 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 HTR2AP28223 471 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 GRK5P34947 590 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 FOLR3P41439 243 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 SLC26A5P58743 744 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 PMS2P3Q13401 168 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 DNASE1L3Q13609 305 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 CBFBQ13951 182 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 COL9A2Q14055 689 aaPredicted RBP9.4□□□□□ -0.9
HDAC3-214ENST00000495485 RAB39AQ14964 217 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 CNPY1Q3B7I2 92 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 ELOA3BQ3SY89 546 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 TMEM236Q5W0B7 351 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 CCDC81Q6ZN84 652 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 RTL4Q6ZR62 310 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 LANCL3Q6ZV70 420 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 AHSA2Q719I0 299 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 NUP54Q7Z3B4 507 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 TIPARPQ7Z3E1 657 aaKnown RBP9.4□□□□□ -0.9
HDAC3-214ENST00000495485 ZAR1Q86SH2 424 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 CLVS1Q8IUQ0 354 aaPredicted RBP9.4□□□□□ -0.9
HDAC3-214ENST00000495485 SHISA5Q8N114 240 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 TCEANCQ8N8B7 351 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 SLC38A9Q8NBW4 561 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 ELOA3Q8NG57 546 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 OR13F1Q8NGS4 319 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 ZNF563Q8TA94 476 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 TMEM163Q8TC26 289 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 RAB2BQ8WUD1 216 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 THAP4Q8WY91 577 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 TTC9Q92623 222 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 PMEPA1Q969W9 287 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 CNTNAP3BQ96NU0 1288 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 MYCBPQ99417 103 aaPredicted RBP9.4□□□□□ -0.9
HDAC3-214ENST00000495485 PRR14Q9BWN1 585 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 CNTNAP3Q9BZ76 1288 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 YIPF3Q9GZM5 350 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 WDR70Q9NW82 654 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 ZNF226Q9NYT6 803 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 CNIH4Q9P003 139 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 ERVK-18Q9QC07 812 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 ZMIZ1Q9ULJ6 1067 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.4□□□□□ -0.9
HDAC3-214ENST00000495485 FARSAQ9Y285 508 aaKnown RBP9.4□□□□□ -0.9
HDAC3-214ENST00000495485 RAXQ9Y2V3 346 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 CEPT1Q9Y6K0 416 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 IGSF10Q6WRI0 2623 aa9.4□□□□□ -0.9
HDAC3-214ENST00000495485 A0A087WUJ7 227 aa9.39□□□□□ -0.91
HDAC3-214ENST00000495485 CENPVL1A0A0U1RR11 272 aa9.39□□□□□ -0.91
HDAC3-214ENST00000495485 H3BSA7 217 aa9.39□□□□□ -0.91
HDAC3-214ENST00000495485 K7ENP7 123 aa9.39□□□□□ -0.91
HDAC3-214ENST00000495485 MAN1A2O60476 641 aa9.39□□□□□ -0.91
HDAC3-214ENST00000495485 SEC14L2O76054 403 aa9.39□□□□□ -0.91
HDAC3-214ENST00000495485 IFNGP01579 166 aa9.39□□□□□ -0.91
HDAC3-214ENST00000495485 ITGB2P05107 769 aa9.39□□□□□ -0.91
HDAC3-214ENST00000495485 GP1BBP13224 206 aa9.39□□□□□ -0.91
HDAC3-214ENST00000495485 PRG2P13727 222 aa9.39□□□□□ -0.91
HDAC3-214ENST00000495485 PAICSP22234 425 aaKnown RBP9.39□□□□□ -0.91
HDAC3-214ENST00000495485 DCKP27707 260 aa9.39□□□□□ -0.91
HDAC3-214ENST00000495485 ITPKBP27987 946 aa9.39□□□□□ -0.91
HDAC3-214ENST00000495485 ABCD3P28288 659 aa9.39□□□□□ -0.91
HDAC3-214ENST00000495485 GSTT1P30711 240 aa9.39□□□□□ -0.91
HDAC3-214ENST00000495485 SLC6A6P31641 620 aa9.39□□□□□ -0.91
HDAC3-214ENST00000495485 DLSTP36957 453 aa9.39□□□□□ -0.91
HDAC3-214ENST00000495485 HTR3AP46098 478 aa9.39□□□□□ -0.91
HDAC3-214ENST00000495485 P2RX1P51575 399 aa9.39□□□□□ -0.91
HDAC3-214ENST00000495485 CCR4P51679 360 aa9.39□□□□□ -0.91
HDAC3-214ENST00000495485 EMX1Q04741 257 aaPredicted RBP9.39□□□□□ -0.91
HDAC3-214ENST00000495485 C17orf67Q0P5P2 114 aa9.39□□□□□ -0.91
HDAC3-214ENST00000495485 ST3GAL4Q11206 333 aa9.39□□□□□ -0.91
HDAC3-214ENST00000495485 TMED1Q13445 227 aa9.39□□□□□ -0.91
HDAC3-214ENST00000495485 C1DQ13901 141 aaKnown RBP9.39□□□□□ -0.91
HDAC3-214ENST00000495485 TBCEQ15813 527 aaPredicted RBP9.39□□□□□ -0.91
HDAC3-214ENST00000495485 ST3GAL2Q16842 350 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms