RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 COL28A1Q2UY09 1125 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 CDONQ4KMG0 1287 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 Q6ZTK2 550 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 GPALPP1Q8IXQ4 340 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 ZDHHC1Q8WTX9 485 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 ZNF436Q9C0F3 470 aaPredicted RBP11.79□□□□□ -0.52
VPS52-218ENST00000482399 SLITRK2Q9H156 845 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 NOX4Q9NPH5 578 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 STARD5Q9NSY2 213 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 NUP50Q9UKX7 468 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 SCML1Q9UN30 329 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 ADAM18Q9Y3Q7 739 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 SCN8AQ9UQD0 1980 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 TCRBV16S1A1N1A0A5B0 115 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 ADRB1P08588 477 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 SBK2P0C263 348 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 EPCAMP16422 314 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 CMPK1P30085 196 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 STARP49675 285 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 BTG1P62324 171 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 PLA1AQ53H76 456 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 OR5M10Q6IEU7 315 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 KIAA0907Q7Z7F0 614 aaPredicted RBP11.79□□□□□ -0.52
VPS52-218ENST00000482399 LRRC25Q8N386 305 aaPredicted RBP11.79□□□□□ -0.52
VPS52-218ENST00000482399 OR4K14Q8NGD5 310 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 FCAMRQ8WWV6 532 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 ADAMTS14Q8WXS8 1223 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 MICU1Q9BPX6 476 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 CCDC3Q9BQI4 270 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 MTHFD2LQ9H903 347 aaPredicted RBP11.79□□□□□ -0.52
VPS52-218ENST00000482399 EMC7Q9NPA0 242 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 ZFP64Q9NPA5 681 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 MBNL1Q9NR56 388 aaKnown RBP11.79□□□□□ -0.52
VPS52-218ENST00000482399 IL20Q9NYY1 176 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 SCP2D1Q9UJQ7 156 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 FBXL3Q9UKT7 428 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 OR10H1Q9Y4A9 318 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 DNAH14Q0VDD8 3507 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 ANXA2P2A6NMY6 339 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 VEGFDO43915 354 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 TPOP07202 933 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 ANXA2P07355 339 aaKnown RBP11.78□□□□□ -0.52
VPS52-218ENST00000482399 APEHP13798 732 aaKnown RBP11.78□□□□□ -0.52
VPS52-218ENST00000482399 PRKACAP17612 351 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 ERVFC1P60507 584 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 HTR4Q13639 388 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 ELAVL3Q14576 367 aaKnown RBP11.78□□□□□ -0.52
VPS52-218ENST00000482399 LHX8Q68G74 356 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 KIAA1211LQ6NV74 962 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 ABHD17CQ6PCB6 329 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 NHLRC1Q6VVB1 395 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 ZNF836Q6ZNA1 936 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 SSX6Q7RTT6 188 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 NRSN1Q8IZ57 195 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 ARIH2OSQ8N7S6 290 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 FAM181AQ8N9Y4 354 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 OR56B4Q8NH76 319 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 ST8SIA2Q92186 375 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 PEX11GQ96HA9 241 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 PELI2Q9HAT8 420 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 PHPT1Q9NRX4 125 aaPredicted RBP11.78□□□□□ -0.52
VPS52-218ENST00000482399 POT1Q9NUX5 634 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 HEATR5BQ9P2D3 2071 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 E9PQ18 207 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 CREBL2O60519 120 aaPredicted RBP11.78□□□□□ -0.52
VPS52-218ENST00000482399 UBL3O95164 117 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 HPGDP15428 266 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 POLR2CP19387 275 aaPredicted RBP11.78□□□□□ -0.52
VPS52-218ENST00000482399 POU3F2P20265 443 aaPredicted RBP11.78□□□□□ -0.52
VPS52-218ENST00000482399 DCTDP32321 178 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 PGDP52209 483 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 REEP5Q00765 189 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 ZNF234Q14588 700 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 MAPK14Q16539 360 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 CD276Q5ZPR3 534 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 FAM198BQ6UWH4 519 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 NLRC3Q7RTR2 1065 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 ZNF761Q86XN6 746 aaPredicted RBP11.78□□□□□ -0.52
VPS52-218ENST00000482399 NRROSQ86YC3 692 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 GRAMD2AQ8IUY3 354 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 OR2L5Q8NG80 312 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 YIPF5Q969M3 257 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 MS4A6EQ96DS6 147 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 S100A16Q96FQ6 103 aaKnown RBP11.78□□□□□ -0.52
VPS52-218ENST00000482399 MRGPRX3Q96LB0 322 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 SAV1Q9H4B6 383 aaPredicted RBP11.78□□□□□ -0.52
VPS52-218ENST00000482399 CERS4Q9HA82 394 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 GPN1Q9HCN4 374 aaPredicted RBP11.78□□□□□ -0.52
VPS52-218ENST00000482399 DLL4Q9NR61 685 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 ZNF346Q9UL40 294 aaKnown RBP11.78□□□□□ -0.52
VPS52-218ENST00000482399 CDK2AP1O14519 115 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 DOK2O60496 412 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 CLEC3AO75596 197 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 KRT33AO76009 404 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 MPC2O95563 127 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 PSMB1P20618 241 aaKnown RBP11.78□□□□□ -0.52
VPS52-218ENST00000482399 PPM1AP35813 382 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 PTH2RP49190 550 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 KCNAB1Q14722 419 aa11.78□□□□□ -0.52
VPS52-218ENST00000482399 C2orf27AQ580R0 203 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms