RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 NUDT2P50583 147 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 POLR2HP52434 150 aaKnown RBP4.58□□□□□ -1.68
HDAC6-223ENST00000480525 SLC7A2P52569 658 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 ZNF136P52737 540 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 CRYBA2P53672 197 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 SESN3P58005 492 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 MTPNP58546 118 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 QPRTQ15274 297 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 STK11Q15831 433 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 C3AR1Q16581 482 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 DNAL1Q4LDG9 190 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 SYT14P1Q58G82 188 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 C1QL3Q5VWW1 255 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 RAET1LQ5VY80 246 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 ABLIM2Q6H8Q1 611 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 DESI1Q6ICB0 168 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 RTL6Q6ICC9 239 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 PLEKHM3Q6ZWE6 761 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 CBLL1Q75N03 491 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 TRPM8Q7Z2W7 1104 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 WDR53Q7Z5U6 358 aaPredicted RBP4.58□□□□□ -1.68
HDAC6-223ENST00000480525 MRGPRGQ86SM5 289 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 ATG4DQ86TL0 474 aaPredicted RBP4.58□□□□□ -1.68
HDAC6-223ENST00000480525 CD163Q86VB7 1156 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 MICU2Q8IYU8 434 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 SCAIQ8N9R8 606 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 OR10A6Q8NH74 314 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 LILRB4Q8NHJ6 448 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 MFSD8Q8NHS3 518 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 POC1BQ8TC44 478 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 DOK4Q8TEW6 326 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 RND1Q92730 232 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 DDIT4LQ96D03 193 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 RCN3Q96D15 328 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 ZG16BQ96DA0 208 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 LRRC46Q96FV0 321 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 SLC41A3Q96GZ6 507 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 CCDC120Q96HB5 630 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 GMPPAQ96IJ6 420 aaPredicted RBP4.58□□□□□ -1.68
HDAC6-223ENST00000480525 KLHL15Q96M94 604 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 PSMG3-AS1Q96PY0 264 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 SF3B5Q9BWJ5 86 aaKnown RBP4.58□□□□□ -1.68
HDAC6-223ENST00000480525 BCO1Q9HAY6 547 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 MOV10Q9HCE1 1003 aaKnown RBP4.58□□□□□ -1.68
HDAC6-223ENST00000480525 COQ3Q9NZJ6 369 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 FLRT3Q9NZU0 649 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 MED11Q9P086 117 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 LUZP4Q9P127 313 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 ACTR3BQ9P1U1 418 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 ARMCX1Q9P291 453 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 CD300AQ9UGN4 299 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 ERRFI1Q9UJM3 462 aaPredicted RBP4.58□□□□□ -1.68
HDAC6-223ENST00000480525 RPS6KA6Q9UK32 745 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 MCTS1Q9ULC4 181 aaKnown RBP4.58□□□□□ -1.68
HDAC6-223ENST00000480525 SAMD4AQ9UPU9 718 aaKnown RBP4.58□□□□□ -1.68
HDAC6-223ENST00000480525 CARD8Q9Y2G2 431 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 ZNF337Q9Y3M9 751 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 CORINQ9Y5Q5 1042 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 LIPGQ9Y5X9 500 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 ALPK2Q86TB3 2170 aa4.58□□□□□ -1.68
HDAC6-223ENST00000480525 A0A087WUJ7 227 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 TRGV8A0A0C4DH27 118 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 CENPVL1A0A0U1RR11 272 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 CENPBD1B2RD01 187 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 NPIPA2E9PIF3 369 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 NPIPA3F8WFD2 350 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 H0Y3Z8 333 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 M0QX08 132 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 CCL21O00585 134 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 GPR171O14626 319 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 DVL2O14641 736 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 MSTNO14793 375 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 LRRTM2O43300 516 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 CYTIPO60759 359 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 ADAM11O75078 769 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 SS18L1O75177 396 aaPredicted RBP4.57□□□□□ -1.68
HDAC6-223ENST00000480525 OR5F1O95221 314 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 CLDN14O95500 239 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 FESP07332 822 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 NUDT7P0C024 238 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 TSPAN19P0C672 248 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 UBTFL6P0CB48 400 aaPredicted RBP4.57□□□□□ -1.68
HDAC6-223ENST00000480525 GLI4P10075 376 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 ESRRAP11474 423 aaPredicted RBP4.57□□□□□ -1.68
HDAC6-223ENST00000480525 GP1BBP13224 206 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 GGT1P19440 569 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 CD247P20963 164 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 CTSSP25774 331 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 IFNA8P32881 189 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 UQCRFS1P47985 274 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 GSK3BP49841 420 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 CASP9P55211 416 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 CLDN15P56746 228 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 PSME3P61289 254 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 SLC35A1P78382 337 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 SRSF1Q07955 248 aaKnown RBP eCLIP4.57□□□□□ -1.68
HDAC6-223ENST00000480525 TRAP1Q12931 704 aaKnown RBP4.57□□□□□ -1.68
HDAC6-223ENST00000480525 FOXF1Q12946 379 aa4.57□□□□□ -1.68
HDAC6-223ENST00000480525 MRPL49Q13405 166 aaKnown RBP4.57□□□□□ -1.68
HDAC6-223ENST00000480525 IGFBP7Q16270 282 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms