RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 NPIPA7E9PJI5 369 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 G3V4G9 280 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 L7N2F9 121 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 RNF13O43567 381 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 LMX1BO60663 402 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 LRATO95237 230 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 NTN1O95631 604 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 PGK1P00558 417 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 IGFBP1P08833 259 aaPredicted RBP6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 HBQ1P09105 142 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 NPIPA8P0DM63 369 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 CCDC130P13994 396 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 GNB3P16520 340 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 PRKACGP22612 351 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 CALML3P27482 149 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 CHRNB4P30926 498 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 UGT1A5P35504 534 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 SLC7A2P52569 658 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 ATP1B3P54709 279 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 DLX5P56178 289 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 SNRPD1P62314 119 aaKnown RBP6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 PPP1R7Q15435 360 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 TP53I3Q53FA7 332 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 BEND3Q5T5X7 828 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 WSCD1Q658N2 575 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 APOOLQ6UXV4 268 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 STAC2Q6ZMT1 411 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 FGFRL1Q8N441 504 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 ZNF491Q8N8L2 437 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 SUMF1Q8NBK3 374 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 KCNG3Q8TAE7 436 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 PANX1Q96RD7 426 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 CABLES2Q9BTV7 478 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 RNF41Q9H4P4 317 aaPredicted RBP6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 ZNF556Q9HAH1 456 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 MEPEQ9NQ76 525 aaPredicted RBP6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 THYN1Q9P016 225 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 TMEM181Q9P2C4 612 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 NPIPA1Q9UND3 350 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 GMPPBQ9Y5P6 360 aa6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 SPTBN5Q9NRC6 3674 aaKnown RBP6.1□□□□□ -1.43
GAPVD1-217ENST00000479511 LRRC37AA6NMS7 1700 aa6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 DDX60Q8IY21 1712 aaKnown RBP6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 K7EQG2 157 aa6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 MSH4O15457 936 aa6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 TAPBPO15533 448 aa6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 DFNA5O60443 496 aa6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 WBP4O75554 376 aaKnown RBP6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 IGHG3P01860 377 aa6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 WNT2P09544 360 aa6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 CCL5P13501 91 aa6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 ETS2P15036 469 aa6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 EMDP50402 254 aa6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 HLA-BQ31612 363 aa6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 SNAI3Q3KNW1 292 aa6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 ZNF718Q3SXZ3 478 aa6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 FAM76BQ5HYJ3 339 aa6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 C6orf226Q5I0X4 101 aa6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 ADAMTSL4-AS1Q5T5F5 129 aa6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 GCNT7Q6ZNI0 430 aa6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 STOX1Q6ZVD7 989 aa6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 BIVMQ86UB2 503 aa6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 SAMD12Q8N8I0 201 aa6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 OR1B1Q8NGR6 318 aa6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 ZNF519Q8TB69 540 aa6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 SPPL2AQ8TCT8 520 aa6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 SDSLQ96GA7 329 aa6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 GMPPAQ96IJ6 420 aaPredicted RBP6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 COPS8Q99627 209 aa6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 BCL7BQ9BQE9 202 aa6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 MTG1Q9BT17 334 aaPredicted RBP6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 PLCXD1Q9NUJ7 323 aa6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 GALPQ9UBC7 116 aa6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 ALG6Q9Y672 507 aa6.09□□□□□ -1.43
GAPVD1-217ENST00000479511 VCANP13611 3396 aa6.09□□□□□ -1.44
GAPVD1-217ENST00000479511 BRCA2P51587 3418 aa6.08□□□□□ -1.44
GAPVD1-217ENST00000479511 GRIN2DO15399 1336 aa6.08□□□□□ -1.44
GAPVD1-217ENST00000479511 SALL1Q9NSC2 1324 aa6.08□□□□□ -1.44
GAPVD1-217ENST00000479511 BMPR1BO00238 502 aa6.08□□□□□ -1.44
GAPVD1-217ENST00000479511 CASC3O15234 703 aaKnown RBP6.08□□□□□ -1.44
GAPVD1-217ENST00000479511 TYROBPO43914 113 aa6.08□□□□□ -1.44
GAPVD1-217ENST00000479511 N4BP1O75113 896 aaKnown RBP6.08□□□□□ -1.44
GAPVD1-217ENST00000479511 PCCAP05165 728 aaPredicted RBP6.08□□□□□ -1.44
GAPVD1-217ENST00000479511 FCGR3AP08637 254 aa6.08□□□□□ -1.44
GAPVD1-217ENST00000479511 H2BFMP0C1H6 154 aa6.08□□□□□ -1.44
GAPVD1-217ENST00000479511 ACADSP16219 412 aa6.08□□□□□ -1.44
GAPVD1-217ENST00000479511 EFNB2P52799 333 aa6.08□□□□□ -1.44
GAPVD1-217ENST00000479511 ACER2Q5QJU3 275 aa6.08□□□□□ -1.44
GAPVD1-217ENST00000479511 LINC00242Q5T6M2 205 aa6.08□□□□□ -1.44
GAPVD1-217ENST00000479511 STPG1Q5TH74 334 aa6.08□□□□□ -1.44
GAPVD1-217ENST00000479511 FAM219BQ5XKK7 198 aa6.08□□□□□ -1.44
GAPVD1-217ENST00000479511 LCLAT1Q6UWP7 414 aa6.08□□□□□ -1.44
GAPVD1-217ENST00000479511 ANGPTL8Q6UXH0 198 aa6.08□□□□□ -1.44
GAPVD1-217ENST00000479511 VITQ6UXI7 678 aa6.08□□□□□ -1.44
GAPVD1-217ENST00000479511 EGFL6Q8IUX8 553 aa6.08□□□□□ -1.44
GAPVD1-217ENST00000479511 OFCC1Q8IZS5 231 aa6.08□□□□□ -1.44
GAPVD1-217ENST00000479511 Q8N9G6 341 aaPredicted RBP6.08□□□□□ -1.44
GAPVD1-217ENST00000479511 ZSCAN4Q8NAM6 433 aaPredicted RBP6.08□□□□□ -1.44
GAPVD1-217ENST00000479511 FAM110BQ8TC76 370 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms