RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 ILF3Q12906 894 aaKnown RBP eCLIP12.83□□□□□ -0.35
HDAC1-206ENST00000476391 NAE1Q13564 534 aa12.83□□□□□ -0.35
HDAC1-206ENST00000476391 FAM180BQ6P0A1 224 aa12.83□□□□□ -0.35
HDAC1-206ENST00000476391 PPTC7Q8NI37 304 aa12.83□□□□□ -0.35
HDAC1-206ENST00000476391 C15orf40Q8WUR7 153 aa12.83□□□□□ -0.35
HDAC1-206ENST00000476391 C19orf43Q9BQ61 176 aa12.83□□□□□ -0.35
HDAC1-206ENST00000476391 NDC1Q9BTX1 674 aa12.83□□□□□ -0.35
HDAC1-206ENST00000476391 SGK2Q9HBY8 427 aa12.83□□□□□ -0.35
HDAC1-206ENST00000476391 INPP5EQ9NRR6 644 aa12.83□□□□□ -0.35
HDAC1-206ENST00000476391 DZANK1Q9NVP4 752 aa12.83□□□□□ -0.35
HDAC1-206ENST00000476391 LHX6Q9UPM6 363 aa12.83□□□□□ -0.35
HDAC1-206ENST00000476391 A0A1W2PPE3 182 aa12.83□□□□□ -0.36
HDAC1-206ENST00000476391 PIP5K1CO60331 668 aa12.83□□□□□ -0.36
HDAC1-206ENST00000476391 ARL6IP5O75915 188 aa12.83□□□□□ -0.36
HDAC1-206ENST00000476391 LY86O95711 162 aa12.83□□□□□ -0.36
HDAC1-206ENST00000476391 CD8AP01732 235 aa12.83□□□□□ -0.36
HDAC1-206ENST00000476391 ALKBH1Q13686 389 aaKnown RBP12.83□□□□□ -0.36
HDAC1-206ENST00000476391 LBHQ53QV2 105 aaPredicted RBP12.83□□□□□ -0.36
HDAC1-206ENST00000476391 NKAPLQ5M9Q1 402 aa12.83□□□□□ -0.36
HDAC1-206ENST00000476391 CLEC12AQ5QGZ9 265 aa12.83□□□□□ -0.36
HDAC1-206ENST00000476391 FAAP20Q6NZ36 180 aa12.83□□□□□ -0.36
HDAC1-206ENST00000476391 ADCK2Q7Z695 626 aa12.83□□□□□ -0.36
HDAC1-206ENST00000476391 PARGQ86W56 976 aa12.83□□□□□ -0.36
HDAC1-206ENST00000476391 GID4Q8IVV7 300 aa12.83□□□□□ -0.36
HDAC1-206ENST00000476391 ASB11Q8WXH4 323 aa12.83□□□□□ -0.36
HDAC1-206ENST00000476391 GCDHQ92947 438 aaPredicted RBP12.83□□□□□ -0.36
HDAC1-206ENST00000476391 HIST1H2BAQ96A08 127 aa12.83□□□□□ -0.36
HDAC1-206ENST00000476391 PGLYRP3Q96LB9 341 aa12.83□□□□□ -0.36
HDAC1-206ENST00000476391 SPSB2Q99619 263 aa12.83□□□□□ -0.36
HDAC1-206ENST00000476391 TREM1Q9NP99 234 aa12.83□□□□□ -0.36
HDAC1-206ENST00000476391 SPG21Q9NZD8 308 aa12.83□□□□□ -0.36
HDAC1-206ENST00000476391 ASH2LQ9UBL3 628 aa12.83□□□□□ -0.36
HDAC1-206ENST00000476391 CRLS1Q9UJA2 301 aa12.83□□□□□ -0.36
HDAC1-206ENST00000476391 TNFSF18Q9UNG2 199 aa12.83□□□□□ -0.36
HDAC1-206ENST00000476391 TMEM272A0A1B0GTI8 110 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 ACOT7O00154 380 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 PPM1DO15297 605 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 SLC16A5O15375 505 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 PPIHO43447 177 aaKnown RBP12.82□□□□□ -0.36
HDAC1-206ENST00000476391 KDELR3O43731 214 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 CD79AP11912 226 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 APEHP13798 732 aaKnown RBP12.82□□□□□ -0.36
HDAC1-206ENST00000476391 ZNF14P17017 642 aaPredicted RBP12.82□□□□□ -0.36
HDAC1-206ENST00000476391 DCTDP32321 178 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 CHAF1BQ13112 559 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 GLT8D1Q68CQ7 371 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 IL34Q6ZMJ4 242 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 OVCH1Q7RTY7 1134 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 BBS1Q8NFJ9 593 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 NEURL3Q96EH8 262 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 C14orf79Q96F83 325 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 TOLLIPQ9H0E2 274 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 KLHL31Q9H511 634 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 ACKR4Q9NPB9 350 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 MMP26Q9NRE1 261 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 DAPL1A0PJW8 107 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 GLTPD2A6NH11 291 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 BLOC1S5-TXNDC5H3BN57 136 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 AP4M1O00189 453 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 TMEM127O75204 238 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 CH25HO95992 272 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 SLC25A4P12235 298 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 POU3F4P49335 361 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 RAB5CP51148 216 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 FAM199XQ6PEV8 388 aaPredicted RBP12.82□□□□□ -0.36
HDAC1-206ENST00000476391 KRT77Q7Z794 578 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 OR4Q3Q8NH05 313 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 AKR7LQ8NHP1 331 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 TRIM43Q96BQ3 446 aaPredicted RBP12.82□□□□□ -0.36
HDAC1-206ENST00000476391 LURAP1Q96LR2 239 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 VRK1Q99986 396 aaPredicted RBP12.82□□□□□ -0.36
HDAC1-206ENST00000476391 ATG10Q9H0Y0 220 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 C2orf42Q9NWW7 574 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 RCC2Q9P258 522 aaKnown RBP12.82□□□□□ -0.36
HDAC1-206ENST00000476391 SCML2Q9UQR0 700 aa12.82□□□□□ -0.36
HDAC1-206ENST00000476391 M0R3H8 397 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 SYT5O00445 386 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 TGM5O43548 720 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 PRAMEF12O95522 483 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 TRHRP34981 398 aaPredicted RBP12.81□□□□□ -0.36
HDAC1-206ENST00000476391 NSG1P42857 185 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 RBP2P50120 134 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 SRSF3P84103 164 aaKnown RBP12.81□□□□□ -0.36
HDAC1-206ENST00000476391 EFEMP1Q12805 493 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 TUSC3Q13454 348 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 C9orf131Q5VYM1 1079 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 TNFAIP8L2Q6P589 184 aaPredicted RBP12.81□□□□□ -0.36
HDAC1-206ENST00000476391 SLC29A4Q7RTT9 530 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 REC114Q7Z4M0 266 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 C6orf120Q7Z4R8 191 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.81□□□□□ -0.36
HDAC1-206ENST00000476391 GTPBP8Q8N3Z3 284 aaPredicted RBP12.81□□□□□ -0.36
HDAC1-206ENST00000476391 OR5J2Q8NH18 312 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 FBXO17Q96EF6 278 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 TEAD3Q99594 435 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 TEX101Q9BY14 249 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.81□□□□□ -0.36
HDAC1-206ENST00000476391 TMEM100Q9NV29 134 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 ICKQ9UPZ9 632 aa12.81□□□□□ -0.36
HDAC1-206ENST00000476391 MYO10Q9HD67 2058 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms