RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 PPIL1Q9Y3C6 166 aa12.75□□□□□ -0.37
NPHP4-207ENST00000470763 GREM1O60565 184 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 STX11O75558 287 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 HMGN1P05114 100 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 GLAP06280 429 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 CLTBP09497 229 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 ACHEP22303 614 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 KHKP50053 298 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 RGS8P57771 180 aaPredicted RBP12.74□□□□□ -0.37
NPHP4-207ENST00000470763 UBXN2BQ14CS0 331 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 ASPGQ86U10 573 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 EIF4E3Q8N5X7 224 aaKnown RBP12.74□□□□□ -0.37
NPHP4-207ENST00000470763 BCL7CQ8WUZ0 217 aaPredicted RBP12.74□□□□□ -0.37
NPHP4-207ENST00000470763 SLC25A28Q96A46 364 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 TOX2Q96NM4 488 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 CAMK1GQ96NX5 476 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 ADAT1Q9BUB4 502 aaKnown RBP12.74□□□□□ -0.37
NPHP4-207ENST00000470763 GPN1Q9HCN4 374 aaPredicted RBP12.74□□□□□ -0.37
NPHP4-207ENST00000470763 DENND4CQ5VZ89 1909 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 A0A1W2PS29 197 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 PRSS44E7EML9 344 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 PYCARD-AS1I3L0S3 204 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 GPR31O00270 319 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 GOSR2O14653 212 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 KRT33AO76009 404 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 C8orf89P0DMQ9 161 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 MAT2AP31153 395 aaKnown RBP12.74□□□□□ -0.37
NPHP4-207ENST00000470763 PRLHRP49683 370 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 CLDN2P57739 230 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 SCRN3Q0VDG4 424 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 SERTAD2Q14140 314 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 UBE2NLQ5JXB2 153 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 PRAMEF14Q5SWL7 426 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 PRAMEF13Q5VWM6 474 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 ZNF433Q8N7K0 673 aaPredicted RBP12.74□□□□□ -0.37
NPHP4-207ENST00000470763 PEX11GQ96HA9 241 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 AMDHD1Q96NU7 426 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 POLMQ9NP87 494 aaPredicted RBP12.74□□□□□ -0.37
NPHP4-207ENST00000470763 LHX9Q9NQ69 397 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 PRDM9Q9NQV7 894 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 KLHL9Q9P2J3 617 aa12.74□□□□□ -0.37
NPHP4-207ENST00000470763 MPTX1A8MV57 137 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 KIAA0355O15063 1070 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 VSIG10L2P0DP72 767 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 CTSAP10619 480 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 AKR1C2P52895 323 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 ZNF85Q03923 595 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 AKR1C1Q04828 323 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 RIPPLY1Q0D2K3 151 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 MPP7Q5T2T1 576 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 GDF7Q7Z4P5 450 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 TRAPPC5Q8IUR0 188 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 OR5T2Q8NGG2 359 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 PNPLA2Q96AD5 504 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 ARSGQ96EG1 525 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 MCHR1Q99705 422 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 TRMT61BQ9BVS5 477 aaKnown RBP12.73□□□□□ -0.37
NPHP4-207ENST00000470763 SLC7A7Q9UM01 511 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 HEATR5BQ9P2D3 2071 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 CTDSPLO15194 276 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 PRAMEF2O60811 474 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 RLN1P04808 185 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 MAGEB1P43366 347 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 SORDQ00796 357 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 AGERQ15109 404 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 HENMT1Q5T8I9 393 aaKnown RBP12.73□□□□□ -0.37
NPHP4-207ENST00000470763 STPG1Q5TH74 334 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 DMKNQ6E0U4 476 aaPredicted RBP12.73□□□□□ -0.37
NPHP4-207ENST00000470763 FCRLAQ7L513 359 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 CMTM8Q8IZV2 173 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 NSMAFQ92636 917 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 WNT2BQ93097 391 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 SLC41A3Q96GZ6 507 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 LRIG1Q96JA1 1093 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 TEAD3Q99594 435 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 MFFQ9GZY8 342 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 BCL2L10Q9HD36 194 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 COA4Q9NYJ1 87 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 TAS2R10Q9NYW0 307 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 XIRP2A4UGR9 3374 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 CHD7Q9P2D1 2997 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 VCANP13611 3396 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 OR2W5A6NFC9 320 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 H7C4K7 107 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 IL9P15248 144 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 FRKP42685 505 aaPredicted RBP12.73□□□□□ -0.37
NPHP4-207ENST00000470763 FXYD6P3P58550 94 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 RPS15P62841 145 aaKnown RBP12.73□□□□□ -0.37
NPHP4-207ENST00000470763 TRAM1Q15629 374 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 ZC3H14Q6PJT7 736 aaKnown RBP12.73□□□□□ -0.37
NPHP4-207ENST00000470763 BRIX1Q8TDN6 353 aaKnown RBP12.73□□□□□ -0.37
NPHP4-207ENST00000470763 FCAMRQ8WWV6 532 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 OVCA2Q8WZ82 227 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 GLYATL1Q969I3 302 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 PDCD1LG2Q9BQ51 273 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 DNTTIP1Q9H147 329 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 ZNF275Q9NSD4 429 aaPredicted RBP12.73□□□□□ -0.37
NPHP4-207ENST00000470763 WSB2Q9NYS7 404 aaPredicted RBP12.73□□□□□ -0.37
NPHP4-207ENST00000470763 TAC3Q9UHF0 121 aa12.73□□□□□ -0.37
NPHP4-207ENST00000470763 HMSDA8MTL9 139 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms