RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 TPT1P8Q9HAU6 139 aa15.77■□□□□ 0.12
LSM5-204ENST00000409909 TCF7L2Q9NQB0 619 aa15.77■□□□□ 0.12
LSM5-204ENST00000409909 CTPS2Q9NRF8 586 aa15.77■□□□□ 0.12
LSM5-204ENST00000409909 KLHL13Q9P2N7 655 aa15.77■□□□□ 0.12
LSM5-204ENST00000409909 SETD2Q9BYW2 2564 aaPredicted RBP15.77■□□□□ 0.11
LSM5-204ENST00000409909 UQCRHLA0A096LP55 91 aa15.76■□□□□ 0.11
LSM5-204ENST00000409909 SMAD9O15198 467 aaKnown RBP15.76■□□□□ 0.11
LSM5-204ENST00000409909 ATE1O95260 518 aa15.76■□□□□ 0.11
LSM5-204ENST00000409909 ANP32DO95626 131 aa15.76■□□□□ 0.11
LSM5-204ENST00000409909 THBDP07204 575 aa15.76■□□□□ 0.11
LSM5-204ENST00000409909 TFPTP0C1Z6 253 aa15.76■□□□□ 0.11
LSM5-204ENST00000409909 CD1EP15812 388 aa15.76■□□□□ 0.11
LSM5-204ENST00000409909 CRYGSP22914 178 aa15.76■□□□□ 0.11
LSM5-204ENST00000409909 APOBEC1P41238 236 aaKnown RBP15.76■□□□□ 0.11
LSM5-204ENST00000409909 CRATP43155 626 aa15.76■□□□□ 0.11
LSM5-204ENST00000409909 MAGEA8P43361 318 aa15.76■□□□□ 0.11
LSM5-204ENST00000409909 MRPL19P49406 292 aaKnown RBP15.76■□□□□ 0.11
LSM5-204ENST00000409909 SLC2A7Q6PXP3 512 aa15.76■□□□□ 0.11
LSM5-204ENST00000409909 BEND4Q6ZU67 534 aa15.76■□□□□ 0.11
LSM5-204ENST00000409909 ADGRG3Q86Y34 549 aa15.76■□□□□ 0.11
LSM5-204ENST00000409909 FUNDC1Q8IVP5 155 aa15.76■□□□□ 0.11
LSM5-204ENST00000409909 CMIPQ8IY22 773 aa15.76■□□□□ 0.11
LSM5-204ENST00000409909 ZNF563Q8TA94 476 aa15.76■□□□□ 0.11
LSM5-204ENST00000409909 ZC3HAV1LQ96H79 300 aaKnown RBP15.76■□□□□ 0.11
LSM5-204ENST00000409909 PAIP1Q9H074 479 aaKnown RBP15.76■□□□□ 0.11
LSM5-204ENST00000409909 VIPAS39Q9H9C1 493 aa15.76■□□□□ 0.11
LSM5-204ENST00000409909 GP6Q9HCN6 339 aa15.76■□□□□ 0.11
LSM5-204ENST00000409909 SERINC1Q9NRX5 453 aa15.76■□□□□ 0.11
LSM5-204ENST00000409909 ZNF226Q9NYT6 803 aa15.76■□□□□ 0.11
LSM5-204ENST00000409909 PCDHB14Q9Y5E9 798 aa15.76■□□□□ 0.11
LSM5-204ENST00000409909 ROS1P08922 2347 aa15.76■□□□□ 0.11
LSM5-204ENST00000409909 HMGB1P1B2RPK0 211 aaPredicted RBP15.75■□□□□ 0.11
LSM5-204ENST00000409909 POLR3GO15318 223 aaPredicted RBP15.75■□□□□ 0.11
LSM5-204ENST00000409909 RAF1P04049 648 aa15.75■□□□□ 0.11
LSM5-204ENST00000409909 YES1P07947 543 aa15.75■□□□□ 0.11
LSM5-204ENST00000409909 HOXB9P17482 250 aaPredicted RBP15.75■□□□□ 0.11
LSM5-204ENST00000409909 LOXP28300 417 aaPredicted RBP15.75■□□□□ 0.11
LSM5-204ENST00000409909 IDH2P48735 452 aaKnown RBP15.75■□□□□ 0.11
LSM5-204ENST00000409909 DIO1P49895 249 aa15.75■□□□□ 0.11
LSM5-204ENST00000409909 AQP5P55064 265 aa15.75■□□□□ 0.11
LSM5-204ENST00000409909 SYT14P1Q58G82 188 aa15.75■□□□□ 0.11
LSM5-204ENST00000409909 TMEM201Q5SNT2 666 aa15.75■□□□□ 0.11
LSM5-204ENST00000409909 C6orf10Q5SRN2 563 aa15.75■□□□□ 0.11
LSM5-204ENST00000409909 TFAP2EQ6VUC0 442 aa15.75■□□□□ 0.11
LSM5-204ENST00000409909 TMPPEQ6ZT21 453 aa15.75■□□□□ 0.11
LSM5-204ENST00000409909 GRINAQ7Z429 371 aa15.75■□□□□ 0.11
LSM5-204ENST00000409909 SLC43A2Q8N370 569 aa15.75■□□□□ 0.11
LSM5-204ENST00000409909 SLC38A5Q8WUX1 472 aa15.75■□□□□ 0.11
LSM5-204ENST00000409909 WDR60Q8WVS4 1066 aa15.75■□□□□ 0.11
LSM5-204ENST00000409909 PMM1Q92871 262 aa15.75■□□□□ 0.11
LSM5-204ENST00000409909 MBD6Q96DN6 1003 aa15.75■□□□□ 0.11
LSM5-204ENST00000409909 PIK3IP1Q96FE7 263 aa15.75■□□□□ 0.11
LSM5-204ENST00000409909 PSD2Q9BQI7 771 aa15.75■□□□□ 0.11
LSM5-204ENST00000409909 CCDC28BQ9BUN5 200 aa15.75■□□□□ 0.11
LSM5-204ENST00000409909 SLC52A3Q9NQ40 469 aa15.75■□□□□ 0.11
LSM5-204ENST00000409909 EDARQ9UNE0 448 aa15.75■□□□□ 0.11
LSM5-204ENST00000409909 ACANP16112 2415 aa15.75■□□□□ 0.11
LSM5-204ENST00000409909 DSPPQ9NZW4 1301 aa15.74■□□□□ 0.11
LSM5-204ENST00000409909 CYTIPO60759 359 aa15.74■□□□□ 0.11
LSM5-204ENST00000409909 GCM2O75603 506 aaPredicted RBP15.74■□□□□ 0.11
LSM5-204ENST00000409909 DBIP07108 87 aaKnown RBP15.74■□□□□ 0.11
LSM5-204ENST00000409909 IL7RP16871 459 aa15.74■□□□□ 0.11
LSM5-204ENST00000409909 DSTNP60981 165 aa15.74■□□□□ 0.11
LSM5-204ENST00000409909 PPP2R2AP63151 447 aa15.74■□□□□ 0.11
LSM5-204ENST00000409909 MRPL2Q5T653 305 aaKnown RBP15.74■□□□□ 0.11
LSM5-204ENST00000409909 BLOC1S3Q6QNY0 202 aa15.74■□□□□ 0.11
LSM5-204ENST00000409909 STK32CQ86UX6 486 aa15.74■□□□□ 0.11
LSM5-204ENST00000409909 GABRG1Q8N1C3 465 aa15.74■□□□□ 0.11
LSM5-204ENST00000409909 SLC25A43Q8WUT9 341 aaPredicted RBP15.74■□□□□ 0.11
LSM5-204ENST00000409909 DYDC1Q8WWB3 177 aa15.74■□□□□ 0.11
LSM5-204ENST00000409909 ZNF775Q96BV0 537 aaPredicted RBP15.74■□□□□ 0.11
LSM5-204ENST00000409909 DNAJA3Q96EY1 480 aa15.74■□□□□ 0.11
LSM5-204ENST00000409909 ARL5BQ96KC2 179 aa15.74■□□□□ 0.11
LSM5-204ENST00000409909 HS3ST6Q96QI5 342 aa15.74■□□□□ 0.11
LSM5-204ENST00000409909 OR11A1Q9GZK7 315 aa15.74■□□□□ 0.11
LSM5-204ENST00000409909 BCO1Q9HAY6 547 aa15.74■□□□□ 0.11
LSM5-204ENST00000409909 INTS9Q9NV88 658 aaKnown RBP15.74■□□□□ 0.11
LSM5-204ENST00000409909 RLIMQ9NVW2 624 aa15.74■□□□□ 0.11
LSM5-204ENST00000409909 P2RX2Q9UBL9 471 aa15.74■□□□□ 0.11
LSM5-204ENST00000409909 CHRNA9Q9UGM1 479 aa15.74■□□□□ 0.11
LSM5-204ENST00000409909 SULT2B1O00204 365 aa15.73■□□□□ 0.11
LSM5-204ENST00000409909 BCHEP06276 602 aa15.73■□□□□ 0.11
LSM5-204ENST00000409909 FESP07332 822 aa15.73■□□□□ 0.11
LSM5-204ENST00000409909 NUDT7P0C024 238 aa15.73■□□□□ 0.11
LSM5-204ENST00000409909 TFPIP10646 304 aa15.73■□□□□ 0.11
LSM5-204ENST00000409909 EDNRAP25101 427 aa15.73■□□□□ 0.11
LSM5-204ENST00000409909 STX1BP61266 288 aa15.73■□□□□ 0.11
LSM5-204ENST00000409909 RASGEF1BQ0VAM2 473 aa15.73■□□□□ 0.11
LSM5-204ENST00000409909 KEAP1Q14145 624 aa15.73■□□□□ 0.11
LSM5-204ENST00000409909 RGNQ15493 299 aa15.73■□□□□ 0.11
LSM5-204ENST00000409909 RPS26P11Q5JNZ5 115 aaPredicted RBP15.73■□□□□ 0.11
LSM5-204ENST00000409909 CXorf67Q86X51 503 aaPredicted RBP15.73■□□□□ 0.11
LSM5-204ENST00000409909 VRK2Q86Y07 508 aa15.73■□□□□ 0.11
LSM5-204ENST00000409909 PEX5LQ8IYB4 626 aa15.73■□□□□ 0.11
LSM5-204ENST00000409909 GOLGA6L1Q8N7Z2 621 aa15.73■□□□□ 0.11
LSM5-204ENST00000409909 OR52P1PQ8NH57 321 aa15.73■□□□□ 0.11
LSM5-204ENST00000409909 CKAP2Q8WWK9 683 aa15.73■□□□□ 0.11
LSM5-204ENST00000409909 ZNF300Q96RE9 604 aaPredicted RBP15.73■□□□□ 0.11
LSM5-204ENST00000409909 ACTR6Q9GZN1 396 aa15.73■□□□□ 0.11
LSM5-204ENST00000409909 SLC25A37Q9NYZ2 338 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms