RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 MED25Q71SY5 747 aa16.65■□□□□ 0.26
CD40-201ENST00000372276 VASH1Q7L8A9 365 aaPredicted RBP16.65■□□□□ 0.26
CD40-201ENST00000372276 TMEM99Q8N816 258 aa16.65■□□□□ 0.26
CD40-201ENST00000372276 ZNF614Q8N883 585 aa16.65■□□□□ 0.26
CD40-201ENST00000372276 ZNF527Q8NB42 609 aa16.65■□□□□ 0.26
CD40-201ENST00000372276 OR6F1Q8NGZ6 308 aa16.65■□□□□ 0.26
CD40-201ENST00000372276 HAVCR2Q8TDQ0 301 aa16.65■□□□□ 0.26
CD40-201ENST00000372276 SMPDL3BQ92485 455 aa16.65■□□□□ 0.26
CD40-201ENST00000372276 PHOX2BQ99453 314 aa16.65■□□□□ 0.26
CD40-201ENST00000372276 OR51V1Q9H2C8 321 aa16.65■□□□□ 0.26
CD40-201ENST00000372276 RNF121Q9H920 327 aa16.65■□□□□ 0.26
CD40-201ENST00000372276 ADGRL4Q9HBW9 690 aa16.65■□□□□ 0.26
CD40-201ENST00000372276 RBFOX1Q9NWB1 397 aaKnown RBP16.65■□□□□ 0.26
CD40-201ENST00000372276 NPFFR2Q9Y5X5 522 aa16.65■□□□□ 0.26
CD40-201ENST00000372276 A0A0A6YYC8 382 aaPredicted RBP16.64■□□□□ 0.25
CD40-201ENST00000372276 SERINC4A6NH21 518 aa16.64■□□□□ 0.25
CD40-201ENST00000372276 CD8B2A6NJW9 211 aa16.64■□□□□ 0.25
CD40-201ENST00000372276 SLC9B1P1A6NJY1 282 aa16.64■□□□□ 0.25
CD40-201ENST00000372276 I3L1I5 382 aaPredicted RBP16.64■□□□□ 0.25
CD40-201ENST00000372276 ARPC3O15145 178 aa16.64■□□□□ 0.25
CD40-201ENST00000372276 PROS1P07225 676 aa16.64■□□□□ 0.25
CD40-201ENST00000372276 CD8BP10966 210 aa16.64■□□□□ 0.25
CD40-201ENST00000372276 PNMTP11086 282 aa16.64■□□□□ 0.25
CD40-201ENST00000372276 GPR3P46089 330 aa16.64■□□□□ 0.25
CD40-201ENST00000372276 MAP2K3P46734 347 aa16.64■□□□□ 0.25
CD40-201ENST00000372276 SLC16A1P53985 500 aa16.64■□□□□ 0.25
CD40-201ENST00000372276 PRPS1P60891 318 aa16.64■□□□□ 0.25
CD40-201ENST00000372276 DAB2P98082 770 aa16.64■□□□□ 0.25
CD40-201ENST00000372276 IL10RAQ13651 578 aa16.64■□□□□ 0.25
CD40-201ENST00000372276 IL18Q14116 193 aa16.64■□□□□ 0.25
CD40-201ENST00000372276 TAB1Q15750 504 aa16.64■□□□□ 0.25
CD40-201ENST00000372276 ZNF362Q5T0B9 420 aaPredicted RBP16.64■□□□□ 0.25
CD40-201ENST00000372276 PLET1Q6UQ28 207 aa16.64■□□□□ 0.25
CD40-201ENST00000372276 CARFQ8N187 725 aa16.64■□□□□ 0.25
CD40-201ENST00000372276 DUSP18Q8NEJ0 188 aa16.64■□□□□ 0.25
CD40-201ENST00000372276 OR51A7Q8NH64 312 aa16.64■□□□□ 0.25
CD40-201ENST00000372276 TNFRSF13CQ96RJ3 184 aa16.64■□□□□ 0.25
CD40-201ENST00000372276 GPR174Q9BXC1 333 aa16.64■□□□□ 0.25
CD40-201ENST00000372276 C11orf54Q9H0W9 315 aaPredicted RBP16.64■□□□□ 0.25
CD40-201ENST00000372276 CHRDQ9H2X0 955 aa16.64■□□□□ 0.25
CD40-201ENST00000372276 ISG20L2Q9H9L3 353 aaKnown RBP16.64■□□□□ 0.25
CD40-201ENST00000372276 MCCC2Q9HCC0 563 aa16.64■□□□□ 0.25
CD40-201ENST00000372276 STARD5Q9NSY2 213 aa16.64■□□□□ 0.25
CD40-201ENST00000372276 MRTO4Q9UKD2 239 aaKnown RBP16.64■□□□□ 0.25
CD40-201ENST00000372276 ZNF337Q9Y3M9 751 aa16.64■□□□□ 0.25
CD40-201ENST00000372276 OR10H1Q9Y4A9 318 aa16.64■□□□□ 0.25
CD40-201ENST00000372276 CACNA1IQ9P0X4 2223 aa16.64■□□□□ 0.25
CD40-201ENST00000372276 A0A087WUJ7 227 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 TRAV1-2A0A0B4J238 106 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 B4DGG1 531 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 HRO43593 1189 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 FOXS1O43638 330 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 HPGDSO60760 199 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 PPP1R3DO95685 299 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 CSTAP01040 98 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 CSF2P04141 144 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 GBX2P52951 348 aaPredicted RBP16.63■□□□□ 0.25
CD40-201ENST00000372276 TFF2Q03403 129 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 CRYZQ08257 329 aaKnown RBP16.63■□□□□ 0.25
CD40-201ENST00000372276 CRMP1Q14194 572 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 ZNF267Q14586 743 aaPredicted RBP16.63■□□□□ 0.25
CD40-201ENST00000372276 TMEM31Q5JXX7 168 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 NUP54Q7Z3B4 507 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 RCBTB1Q8NDN9 531 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 OR5M3Q8NGP4 307 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 ABHD4Q8TB40 342 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 ZNF486Q96H40 463 aaPredicted RBP16.63■□□□□ 0.25
CD40-201ENST00000372276 TMEM43Q9BTV4 400 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 LRRC61Q9BV99 259 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 RAB33BQ9H082 229 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 ENKD1Q9H0I2 346 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 MED20Q9H944 212 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 NEK6Q9HC98 313 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 CHRNA9Q9UGM1 479 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 SLC6A5Q9Y345 797 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 TRAV27A0A087WT01 109 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 FAM25AB3EWG3 89 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 FAM25CB3EWG5 89 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 FAM25GB3EWG6 89 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 C2CD4DB7Z1M9 353 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 GATBO75879 557 aaKnown RBP16.63■□□□□ 0.25
CD40-201ENST00000372276 ARL6IP5O75915 188 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 FOSL2P15408 326 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 RBMS1P29558 406 aaKnown RBP16.63■□□□□ 0.25
CD40-201ENST00000372276 MLLT3P42568 568 aaPredicted RBP16.63■□□□□ 0.25
CD40-201ENST00000372276 RFX3P48380 749 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 PLAURQ03405 335 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 PON3Q15166 354 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 CCDC58Q4VC31 144 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 DGAT2L6Q6ZPD8 337 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 SPATC1Q76KD6 591 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 PXKQ7Z7A4 578 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 ZAR1Q86SH2 424 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 ARL14Q8N4G2 192 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 PEX11GQ96HA9 241 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 ERMAPQ96PL5 475 aaPredicted RBP16.63■□□□□ 0.25
CD40-201ENST00000372276 NEDD4LQ96PU5 975 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 CNN2Q99439 309 aaKnown RBP16.63■□□□□ 0.25
CD40-201ENST00000372276 SLC38A3Q99624 504 aa16.63■□□□□ 0.25
CD40-201ENST00000372276 TIMP4Q99727 224 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms