RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 BCKDHAP12694 445 aa13.9□□□□□ -0.18
DDX55-202ENST00000354291 IL2RGP31785 369 aa13.9□□□□□ -0.18
DDX55-202ENST00000354291 RPL3P39023 403 aaKnown RBP13.9□□□□□ -0.18
DDX55-202ENST00000354291 MAP3K8P41279 467 aa13.9□□□□□ -0.18
DDX55-202ENST00000354291 VSNL1P62760 191 aa13.9□□□□□ -0.18
DDX55-202ENST00000354291 LGALS3BPQ08380 585 aa13.9□□□□□ -0.18
DDX55-202ENST00000354291 MLC1Q15049 377 aa13.9□□□□□ -0.18
DDX55-202ENST00000354291 ZNF385BQ569K4 471 aa13.9□□□□□ -0.18
DDX55-202ENST00000354291 PRR31Q5SQ13 230 aa13.9□□□□□ -0.18
DDX55-202ENST00000354291 ZCCHC12Q6PEW1 402 aa13.9□□□□□ -0.18
DDX55-202ENST00000354291 UBE2J2Q8N2K1 259 aa13.9□□□□□ -0.18
DDX55-202ENST00000354291 OR6Y1Q8NGX8 325 aa13.9□□□□□ -0.18
DDX55-202ENST00000354291 OR4C3Q8NH37 302 aa13.9□□□□□ -0.18
DDX55-202ENST00000354291 CLHC1Q8NHS4 586 aa13.9□□□□□ -0.18
DDX55-202ENST00000354291 TCP10LQ8TDR4 215 aa13.9□□□□□ -0.18
DDX55-202ENST00000354291 ACTRT2Q8TDY3 377 aa13.9□□□□□ -0.18
DDX55-202ENST00000354291 PIK3R3Q92569 461 aa13.9□□□□□ -0.18
DDX55-202ENST00000354291 MS4A4EQ96PG1 132 aa13.9□□□□□ -0.18
DDX55-202ENST00000354291 FKRPQ9H9S5 495 aa13.9□□□□□ -0.18
DDX55-202ENST00000354291 KLHL9Q9P2J3 617 aa13.9□□□□□ -0.18
DDX55-202ENST00000354291 SLC17A7Q9P2U7 560 aa13.9□□□□□ -0.18
DDX55-202ENST00000354291 SLC25A15Q9Y619 301 aa13.9□□□□□ -0.18
DDX55-202ENST00000354291 NOTCH1P46531 2555 aa13.89□□□□□ -0.19
DDX55-202ENST00000354291 ARFGEF3Q5TH69 2177 aa13.89□□□□□ -0.19
DDX55-202ENST00000354291 TMEM233B4DJY2 109 aa13.89□□□□□ -0.19
DDX55-202ENST00000354291 ALG1L2C9J202 215 aa13.89□□□□□ -0.19
DDX55-202ENST00000354291 ZNF195O14628 629 aa13.89□□□□□ -0.19
DDX55-202ENST00000354291 PIP5K1BO14986 540 aa13.89□□□□□ -0.19
DDX55-202ENST00000354291 EFNA2O43921 213 aa13.89□□□□□ -0.19
DDX55-202ENST00000354291 SPAG7O75391 227 aa13.89□□□□□ -0.19
DDX55-202ENST00000354291 NGFRP08138 427 aa13.89□□□□□ -0.19
DDX55-202ENST00000354291 COX5AP20674 150 aa13.89□□□□□ -0.19
DDX55-202ENST00000354291 APEX1P27695 318 aaKnown RBP13.89□□□□□ -0.19
DDX55-202ENST00000354291 LCN1P31025 176 aa13.89□□□□□ -0.19
DDX55-202ENST00000354291 RASGEF1BQ0VAM2 473 aa13.89□□□□□ -0.19
DDX55-202ENST00000354291 MST1LQ2TV78 715 aa13.89□□□□□ -0.19
DDX55-202ENST00000354291 EMBQ6PCB8 327 aa13.89□□□□□ -0.19
DDX55-202ENST00000354291 SZRD1Q7Z422 152 aa13.89□□□□□ -0.19
DDX55-202ENST00000354291 PEG10Q86TG7 708 aaKnown RBP13.89□□□□□ -0.19
DDX55-202ENST00000354291 ZNF418Q8TF45 676 aaPredicted RBP13.89□□□□□ -0.19
DDX55-202ENST00000354291 FAM216AQ8WUB2 273 aa13.89□□□□□ -0.19
DDX55-202ENST00000354291 PSD2Q9BQI7 771 aa13.89□□□□□ -0.19
DDX55-202ENST00000354291 MECRQ9BV79 373 aa13.89□□□□□ -0.19
DDX55-202ENST00000354291 BCO1Q9HAY6 547 aa13.89□□□□□ -0.19
DDX55-202ENST00000354291 ATP6V1HQ9UI12 483 aa13.89□□□□□ -0.19
DDX55-202ENST00000354291 ING1Q9UK53 422 aaPredicted RBP13.89□□□□□ -0.19
DDX55-202ENST00000354291 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.88□□□□□ -0.19
DDX55-202ENST00000354291 GJE1A6NN92 205 aa13.88□□□□□ -0.19
DDX55-202ENST00000354291 PEX11AO75192 247 aa13.88□□□□□ -0.19
DDX55-202ENST00000354291 OXSR1O95747 527 aaPredicted RBP13.88□□□□□ -0.19
DDX55-202ENST00000354291 HSPA4LO95757 839 aa13.88□□□□□ -0.19
DDX55-202ENST00000354291 ALOX5P09917 674 aa13.88□□□□□ -0.19
DDX55-202ENST00000354291 HPGDP15428 266 aa13.88□□□□□ -0.19
DDX55-202ENST00000354291 HPCAL1P37235 193 aa13.88□□□□□ -0.19
DDX55-202ENST00000354291 EIF1P41567 113 aaKnown RBP13.88□□□□□ -0.19
DDX55-202ENST00000354291 SERPINB4P48594 390 aa13.88□□□□□ -0.19
DDX55-202ENST00000354291 CHN2P52757 468 aa13.88□□□□□ -0.19
DDX55-202ENST00000354291 PHC1P78364 1004 aa13.88□□□□□ -0.19
DDX55-202ENST00000354291 FOXF1Q12946 379 aa13.88□□□□□ -0.19
DDX55-202ENST00000354291 SWI5Q1ZZU3 235 aa13.88□□□□□ -0.19
DDX55-202ENST00000354291 ATP6AP1LQ52LC2 224 aa13.88□□□□□ -0.19
DDX55-202ENST00000354291 SLC46A3Q7Z3Q1 461 aa13.88□□□□□ -0.19
DDX55-202ENST00000354291 NATD1Q8N6N6 113 aa13.88□□□□□ -0.19
DDX55-202ENST00000354291 SLC16A11Q8NCK7 471 aa13.88□□□□□ -0.19
DDX55-202ENST00000354291 B4GALNT2Q8NHY0 566 aa13.88□□□□□ -0.19
DDX55-202ENST00000354291 GIMAP5Q96F15 307 aa13.88□□□□□ -0.19
DDX55-202ENST00000354291 ZNF300Q96RE9 604 aaPredicted RBP13.88□□□□□ -0.19
DDX55-202ENST00000354291 MYOZ1Q9NP98 299 aaPredicted RBP13.88□□□□□ -0.19
DDX55-202ENST00000354291 ATAD3AQ9NVI7 634 aa13.88□□□□□ -0.19
DDX55-202ENST00000354291 TRIM77I1YAP6 450 aa13.87□□□□□ -0.19
DDX55-202ENST00000354291 SCAMP2O15127 329 aaKnown RBP13.87□□□□□ -0.19
DDX55-202ENST00000354291 TMPRSS2O15393 492 aa13.87□□□□□ -0.19
DDX55-202ENST00000354291 LYPLA1O75608 230 aaPredicted RBP13.87□□□□□ -0.19
DDX55-202ENST00000354291 KCNK2O95069 426 aa13.87□□□□□ -0.19
DDX55-202ENST00000354291 SLU7O95391 586 aaKnown RBP13.87□□□□□ -0.19
DDX55-202ENST00000354291 LINGO3P0C6S8 592 aa13.87□□□□□ -0.19
DDX55-202ENST00000354291 ACP2P11117 423 aa13.87□□□□□ -0.19
DDX55-202ENST00000354291 PRIM2P49643 509 aa13.87□□□□□ -0.19
DDX55-202ENST00000354291 SNRPD2P62316 118 aaKnown RBP13.87□□□□□ -0.19
DDX55-202ENST00000354291 MIDNQ504T8 468 aa13.87□□□□□ -0.19
DDX55-202ENST00000354291 XKR7Q5GH72 579 aa13.87□□□□□ -0.19
DDX55-202ENST00000354291 WDR93Q6P2C0 686 aa13.87□□□□□ -0.19
DDX55-202ENST00000354291 ZCCHC23Q6ZST2 131 aa13.87□□□□□ -0.19
DDX55-202ENST00000354291 GALNT5Q7Z7M9 940 aa13.87□□□□□ -0.19
DDX55-202ENST00000354291 FBXO27Q8NI29 283 aa13.87□□□□□ -0.19
DDX55-202ENST00000354291 AGR3Q8TD06 166 aa13.87□□□□□ -0.19
DDX55-202ENST00000354291 AENQ8WTP8 325 aaKnown RBP13.87□□□□□ -0.19
DDX55-202ENST00000354291 SNX18Q96RF0 628 aa13.87□□□□□ -0.19
DDX55-202ENST00000354291 PRPF18Q99633 342 aaKnown RBP13.87□□□□□ -0.19
DDX55-202ENST00000354291 UBQLN4Q9NRR5 601 aa13.87□□□□□ -0.19
DDX55-202ENST00000354291 PCDHGB1Q9Y5G3 927 aa13.87□□□□□ -0.19
DDX55-202ENST00000354291 A0A1W2PNR3 127 aa13.86□□□□□ -0.19
DDX55-202ENST00000354291 STAMBPO95630 424 aa13.86□□□□□ -0.19
DDX55-202ENST00000354291 NUDT14O95848 222 aa13.86□□□□□ -0.19
DDX55-202ENST00000354291 BPGMP07738 259 aa13.86□□□□□ -0.19
DDX55-202ENST00000354291 SLC7A1P30825 629 aa13.86□□□□□ -0.19
DDX55-202ENST00000354291 POU6F2P78424 691 aaPredicted RBP13.86□□□□□ -0.19
DDX55-202ENST00000354291 DUSP5Q16690 384 aa13.86□□□□□ -0.19
DDX55-202ENST00000354291 LSM12Q3MHD2 195 aaKnown RBP13.86□□□□□ -0.19
DDX55-202ENST00000354291 C6orf136Q5SQH8 315 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms