RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 ING4Q9UNL4 249 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 SCN2AQ99250 2005 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 TEX13CA0A0J9YWL9 993 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 PRR23AA6NEV1 266 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 URADA6NGE7 173 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 CTDSPLO15194 276 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 FGF17O60258 216 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 NOS1APO75052 506 aaPredicted RBP8.03□□□□□ -1.12
CLK1-201ENST00000321356 SERPINA3P01011 423 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 TFP02787 698 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 CD1AP06126 327 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 HOXC4P09017 264 aaPredicted RBP8.03□□□□□ -1.12
CLK1-201ENST00000321356 UCHL1P09936 223 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 ANXA3P12429 323 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 NT5EP21589 574 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 SLC6A6P31641 620 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 PYCR1P32322 319 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 RBM34P42696 430 aaKnown RBP8.03□□□□□ -1.12
CLK1-201ENST00000321356 PER3P56645 1201 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 DGCR2P98153 550 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 PITPNAQ00169 270 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 ID2Q02363 134 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 GGTLC2Q14390 218 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 GAS6Q14393 721 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 CDK5R1Q15078 307 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 PRICKLE4Q2TBC4 344 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 ESCO2Q56NI9 601 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 TMEM240Q5SV17 173 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 ARHGAP11AQ6P4F7 1023 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 BAIAP2L2Q6UXY1 529 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 RTL4Q6ZR62 310 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 GRAMD2AQ8IUY3 354 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 SIAH3Q8IW03 269 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 SYS1Q8N2H4 156 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 TOMM5Q8N4H5 51 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 RFLNBQ8N5W9 214 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 CYB561A3Q8NBI2 242 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 OR4D9Q8NGE8 314 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 OR13C5Q8NGS8 318 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 OR51A7Q8NH64 312 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 SMAP2Q8WU79 429 aaPredicted RBP8.03□□□□□ -1.12
CLK1-201ENST00000321356 CNOT9Q92600 299 aaKnown RBP8.03□□□□□ -1.12
CLK1-201ENST00000321356 MARVELD3Q96A59 401 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 PHF21AQ96BD5 680 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 SMIM19Q96E16 107 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 LRFN5Q96NI6 719 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 C1QTNF7Q9BXJ2 289 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 CACNG6Q9BXT2 260 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 SRMSQ9H3Y6 488 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 HEXA-AS1Q9H8Q6 139 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 MAT2BQ9NZL9 334 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 FLRT3Q9NZU0 649 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 AUP1Q9Y679 476 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 ATG2AQ2TAZ0 1938 aa8.03□□□□□ -1.12
CLK1-201ENST00000321356 MEIKINA0A087WXM9 373 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 A0A1B0GTQ1 180 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 A0A1B0GWA3 101 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 GXYLT2A0PJZ3 443 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 LINC00862A6NCI5 91 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 A6NCN8 305 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 LRRC72A6NJI9 287 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 LEUTXA8MZ59 168 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 CYR61O00622 381 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 ARL6IP5O75915 188 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 NKX2-2O95096 273 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 GPR75O95800 540 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 IFNGP01579 166 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 APODP05090 189 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 TPOP07202 933 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 NGFRP08138 427 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 GUSBP08236 651 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 CD3GP09693 182 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 SULT1A3P0DMM9 295 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 SULT1A4P0DMN0 295 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 SNRPBP14678 240 aaKnown RBP8.02□□□□□ -1.12
CLK1-201ENST00000321356 UGT2B7P16662 529 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 CXCL3P19876 107 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 ZNF10P21506 573 aaPredicted RBP8.02□□□□□ -1.12
CLK1-201ENST00000321356 GIFP27352 417 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 SLC16A1P53985 500 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 KIAA1024LP59773 190 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 RPS11P62280 158 aaKnown RBP eCLIP8.02□□□□□ -1.12
CLK1-201ENST00000321356 POU6F2P78424 691 aaPredicted RBP8.02□□□□□ -1.12
CLK1-201ENST00000321356 DYRK1AQ13627 763 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 KLF9Q13886 244 aaPredicted RBP8.02□□□□□ -1.12
CLK1-201ENST00000321356 GSG1Q2KHT4 349 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 FIGNL1Q6PIW4 674 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 TEX261Q6UWH6 196 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 LINC00114Q6XXX2 140 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 ABHD13Q7L211 337 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 ZAR1Q86SH2 424 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 CDH24Q86UP0 819 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 TMEM52Q8NDY8 209 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 OR11H4Q8NGC9 324 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 OR51Q1Q8NH59 317 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 OR14C36Q8NHC7 312 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 RPS4Y2Q8TD47 263 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 DOK4Q8TEW6 326 aa8.02□□□□□ -1.12
CLK1-201ENST00000321356 ZNF431Q8TF32 576 aaPredicted RBP8.02□□□□□ -1.12
CLK1-201ENST00000321356 OR1E3Q8WZA6 343 aa8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms