RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 SLC5A12Q1EHB4 618 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 SLC22A10Q63ZE4 541 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 C18orf63Q68DL7 685 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 FAM111BQ6SJ93 734 aa16.14■□□□□ 0.17
SHANK1-201ENST00000293441 MEPCEQ7L2J0 689 aaKnown RBP16.14■□□□□ 0.17
SHANK1-201ENST00000293441 AGTR1P30556 359 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 QRSL1Q9H0R6 528 aaKnown RBP16.13■□□□□ 0.17
SHANK1-201ENST00000293441 MYH7BA7E2Y1 1941 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 KRBA1A5PL33 1030 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 KLKB1P03952 638 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 CAV2P51636 162 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 SPOCK1Q08629 439 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 OR4K15Q8NH41 348 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 MSANTD3Q96H12 275 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 PCDHGA1Q9Y5H4 931 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 TRAPPC2LH3BP13 241 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 OR7A17O14581 309 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 RAB3DO95716 219 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 SERPINE2P07093 398 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 LTC4SQ16873 150 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 C6orf183Q5T699 404 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 KIAA1211LQ6NV74 962 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 CCBE1Q6UXH8 406 aaPredicted RBP16.13■□□□□ 0.17
SHANK1-201ENST00000293441 TIAM2Q8IVF5 1701 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 MRPL41Q8IXM3 137 aaKnown RBP16.13■□□□□ 0.17
SHANK1-201ENST00000293441 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.13■□□□□ 0.17
SHANK1-201ENST00000293441 OR13C2Q8NGS9 318 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 ZNF681Q96N22 645 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 CCDC32Q9BV29 185 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 EGLN3Q9H6Z9 239 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 FOLH1BQ9HBA9 442 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 PPP1R14DQ9NXH3 145 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 TMEM269A0A1B0GVZ9 245 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 YKT6O15498 198 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 AQP2P41181 271 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 VRK3Q8IV63 474 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 FAIMQ9NVQ4 179 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 PLEKHM1Q9Y4G2 1056 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 WIF1Q9Y5W5 379 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 HHLA1C9JL84 531 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 OR7E24Q6IFN5 339 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 SYT11Q9BT88 431 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 TEX10Q9NXF1 929 aaPredicted RBP16.13■□□□□ 0.17
SHANK1-201ENST00000293441 ANKRD10Q9NXR5 420 aa16.13■□□□□ 0.17
SHANK1-201ENST00000293441 TESQ9UGI8 421 aaKnown RBP16.13■□□□□ 0.17
SHANK1-201ENST00000293441 GK3PQ14409 553 aa16.12■□□□□ 0.17
SHANK1-201ENST00000293441 SBSNQ6UWP8 590 aa16.12■□□□□ 0.17
SHANK1-201ENST00000293441 DEFB123Q8N688 67 aa16.12■□□□□ 0.17
SHANK1-201ENST00000293441 GORASP2Q9H8Y8 452 aa16.12■□□□□ 0.17
SHANK1-201ENST00000293441 ELOVL3Q9HB03 270 aa16.12■□□□□ 0.17
SHANK1-201ENST00000293441 APMAPQ9HDC9 416 aa16.12■□□□□ 0.17
SHANK1-201ENST00000293441 FGF21Q9NSA1 209 aa16.12■□□□□ 0.17
SHANK1-201ENST00000293441 TIMM8AO60220 97 aaPredicted RBP16.12■□□□□ 0.17
SHANK1-201ENST00000293441 CNIH2Q6PI25 160 aa16.12■□□□□ 0.17
SHANK1-201ENST00000293441 TMEM64Q6YI46 380 aa16.12■□□□□ 0.17
SHANK1-201ENST00000293441 MKXQ8IYA7 352 aa16.12■□□□□ 0.17
SHANK1-201ENST00000293441 S100PBPQ96BU1 408 aa16.12■□□□□ 0.17
SHANK1-201ENST00000293441 ACSS1Q9NUB1 689 aaPredicted RBP16.12■□□□□ 0.17
SHANK1-201ENST00000293441 TP53TG5Q9Y2B4 290 aa16.12■□□□□ 0.17
SHANK1-201ENST00000293441 PGGHGQ32M88 737 aa16.12■□□□□ 0.17
SHANK1-201ENST00000293441 KCTD20Q7Z5Y7 419 aa16.12■□□□□ 0.17
SHANK1-201ENST00000293441 OR5B12Q96R08 314 aa16.12■□□□□ 0.17
SHANK1-201ENST00000293441 NGBQ9NPG2 151 aa16.12■□□□□ 0.17
SHANK1-201ENST00000293441 C4AP0C0L4 1744 aa16.12■□□□□ 0.17
SHANK1-201ENST00000293441 B4DXG7 233 aa16.12■□□□□ 0.17
SHANK1-201ENST00000293441 DVL2O14641 736 aa16.12■□□□□ 0.17
SHANK1-201ENST00000293441 EFNA3P52797 238 aa16.12■□□□□ 0.17
SHANK1-201ENST00000293441 CAMK2DQ13557 499 aa16.12■□□□□ 0.17
SHANK1-201ENST00000293441 AKR1C8PQ5T2L2 129 aa16.12■□□□□ 0.17
SHANK1-201ENST00000293441 GPR139Q6DWJ6 353 aa16.12■□□□□ 0.17
SHANK1-201ENST00000293441 TMEM163Q8TC26 289 aa16.12■□□□□ 0.17
SHANK1-201ENST00000293441 ARNTLO00327 626 aa16.12■□□□□ 0.17
SHANK1-201ENST00000293441 MMP12P39900 470 aa16.12■□□□□ 0.17
SHANK1-201ENST00000293441 TPMTP51580 245 aa16.12■□□□□ 0.17
SHANK1-201ENST00000293441 ZNF566Q969W8 418 aa16.12■□□□□ 0.17
SHANK1-201ENST00000293441 COG8Q96MW5 612 aa16.12■□□□□ 0.17
SHANK1-201ENST00000293441 TMEM246Q9BRR3 403 aa16.12■□□□□ 0.17
SHANK1-201ENST00000293441 TACR3P29371 465 aa16.11■□□□□ 0.17
SHANK1-201ENST00000293441 RACK1P63244 317 aaKnown RBP16.11■□□□□ 0.17
SHANK1-201ENST00000293441 BPHLQ86WA6 291 aaPredicted RBP16.11■□□□□ 0.17
SHANK1-201ENST00000293441 FAM160A2Q8N612 972 aaPredicted RBP16.11■□□□□ 0.17
SHANK1-201ENST00000293441 DCUN1D4Q92564 292 aa16.11■□□□□ 0.17
SHANK1-201ENST00000293441 NXPE3Q969Y0 559 aa16.11■□□□□ 0.17
SHANK1-201ENST00000293441 ADAM29Q9UKF5 820 aa16.11■□□□□ 0.17
SHANK1-201ENST00000293441 C2orf72A6NCS6 295 aa16.11■□□□□ 0.17
SHANK1-201ENST00000293441 AP1G1O43747 822 aa16.11■□□□□ 0.17
SHANK1-201ENST00000293441 FAM83HQ6ZRV2 1179 aaPredicted RBP16.11■□□□□ 0.17
SHANK1-201ENST00000293441 KIAA0907Q7Z7F0 614 aaPredicted RBP16.11■□□□□ 0.17
SHANK1-201ENST00000293441 ELSPBP1Q96BH3 223 aa16.11■□□□□ 0.17
SHANK1-201ENST00000293441 ZNF736B4DX44 427 aaPredicted RBP16.11■□□□□ 0.17
SHANK1-201ENST00000293441 ABLIM3O94929 683 aa16.11■□□□□ 0.17
SHANK1-201ENST00000293441 UTS2O95399 124 aa16.11■□□□□ 0.17
SHANK1-201ENST00000293441 DDAH2O95865 285 aa16.11■□□□□ 0.17
SHANK1-201ENST00000293441 HSD17B7P56937 341 aa16.11■□□□□ 0.17
SHANK1-201ENST00000293441 SELPLGQ14242 412 aa16.11■□□□□ 0.17
SHANK1-201ENST00000293441 CBLL1Q75N03 491 aa16.11■□□□□ 0.17
SHANK1-201ENST00000293441 AAED1Q7RTV5 226 aa16.11■□□□□ 0.17
SHANK1-201ENST00000293441 CLEC14AQ86T13 490 aa16.11■□□□□ 0.17
SHANK1-201ENST00000293441 MICU1Q9BPX6 476 aa16.11■□□□□ 0.17
SHANK1-201ENST00000293441 EMC9Q9Y3B6 208 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms