RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 RERGLQ9H628 205 aa11.89□□□□□ -0.51
SPTLC1-201ENST00000262554 MCCC2Q9HCC0 563 aa11.89□□□□□ -0.51
SPTLC1-201ENST00000262554 ZNF304Q9HCX3 659 aa11.89□□□□□ -0.51
SPTLC1-201ENST00000262554 SEMA5BQ9P283 1151 aa11.89□□□□□ -0.51
SPTLC1-201ENST00000262554 CAB39Q9Y376 341 aaPredicted RBP11.89□□□□□ -0.51
SPTLC1-201ENST00000262554 UGT2A1Q9Y4X1 527 aa11.89□□□□□ -0.51
SPTLC1-201ENST00000262554 COL5A1P20908 1838 aaPredicted RBP11.89□□□□□ -0.51
SPTLC1-201ENST00000262554 A0A087WUJ7 227 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 IGKV3D-11A0A0A0MRZ8 115 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 LOC110117498-PIK3R3F6TDL0 507 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 CTDSP2O14595 271 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 GNB5O14775 395 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 TBX1O43435 398 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 PPM1BO75688 479 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 PPP1R3DO95685 299 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 FOLR1P15328 257 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 TGM1P22735 817 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 ADH7P40394 386 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 RANBP1P43487 201 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 BCAP31P51572 246 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 SLC16A1P53985 500 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 MXD1Q05195 221 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 DMWDQ09019 674 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 ELAVL1Q15717 326 aaKnown RBP11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 YOD1Q5VVQ6 348 aaPredicted RBP11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 ZNF322Q6U7Q0 402 aaPredicted RBP11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 CCDC190Q86UF4 302 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 LYSMD2Q8IV50 215 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 ZNF321PQ8N8H1 164 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 ZFP41Q8N8Y5 198 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 DRAXINQ8NBI3 349 aaPredicted RBP11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 SPRYD4Q8WW59 207 aaPredicted RBP11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 PTP4A1Q93096 173 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 TSLPQ969D9 159 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 SLC25A46Q96AG3 418 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 COQ7Q99807 217 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 SLC30A2Q9BRI3 323 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 ZNF649Q9BS31 505 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 MED18Q9BUE0 208 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 BARHL1Q9BZE3 327 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 TPK1Q9H3S4 243 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 INPP5EQ9NRR6 644 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 QPCTLQ9NXS2 382 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 ICAM5Q9UMF0 924 aa11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 YARS2Q9Y2Z4 477 aaKnown RBP11.88□□□□□ -0.51
SPTLC1-201ENST00000262554 IQCMA0A1B0GVH7 501 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 TRDV1A0A1B0GX56 115 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 FRG2CA6NGY1 282 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 C12orf71A8MTZ7 269 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 SCDO00767 359 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 RGS5O15539 181 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 NDUFB2O95178 105 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 HNRNPCP07910 306 aaKnown RBP eCLIP11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 MSL3P1P0C860 447 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 UBL4AP11441 157 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 MYF5P13349 255 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 FGF9P31371 208 aaPredicted RBP11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 SLC9A3P48764 834 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 FABP5Q01469 135 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 BDH1Q02338 343 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 ZP2Q05996 745 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 PRAMEF17Q5VTA0 474 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 FCRLBQ6BAA4 426 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 CD200R1LQ6Q8B3 271 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 B3GLCTQ6Y288 498 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 ZSCAN1Q8NBB4 408 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 SLC2A12Q8TD20 617 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 KISS1RQ969F8 398 aaPredicted RBP11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 LCORQ96JN0 433 aaPredicted RBP11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 ART5Q96L15 291 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 LMF1Q96S06 567 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 TEAD3Q99594 435 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 ELF4Q99607 663 aaPredicted RBP11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 TM9SF2Q99805 663 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 DPYSL5Q9BPU6 564 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 HCAR1Q9BXC0 346 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 NXF5Q9H1B4 397 aaKnown RBP11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 OR51V1Q9H2C8 321 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 PCDHGB6Q9Y5F9 930 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 HEATR5AQ86XA9 2040 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 A0A1B0GX78 115 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 DAPL1A0PJW8 107 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 ZC3H12DA2A288 527 aaKnown RBP11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 UTS2O95399 124 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 DDAH2O95865 285 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 LALBAP00709 142 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 HLA-DPB1P04440 258 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 GIMD1P0DJR0 217 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 CELP19835 753 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 TNFSF8P32971 234 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 DCAF7P61962 342 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 DNASE1L3Q13609 305 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 FHL1Q13642 323 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 CRMP1Q14194 572 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 ARHGAP40Q5TG30 622 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 WBP2NLQ6ICG8 309 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 SLC22A16Q86VW1 577 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 UBALD2Q8IYN6 164 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 GATSQ8NAP1 163 aa11.87□□□□□ -0.51
SPTLC1-201ENST00000262554 FAM71CQ8NEG0 241 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms