RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 TspearJ3S6Y1 670 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Pmm1O35621 262 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Snrpd2P62317 118 aaKnown RBP12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Laptm4aQ60961 233 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Tas2r40Q7TQB8 319 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Fndc9Q8BJN4 226 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Ocel1Q8VCR9 219 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Med9Q8VCS6 142 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Olfr1351Q8VGU6 319 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 LhppQ9D7I5 270 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Scn10aQ6QIY3 1958 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Olfr74A2BHP6 318 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Vsig10lD3YZF7 868 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Klk1P15947 261 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Mapk14P47811 360 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Fam71f1Q3UZD7 341 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Prtn3Q61096 254 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 MdficQ8BX65 247 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Entpd8Q8K0L2 497 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Otub2Q9CQX0 234 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Art4Q9CRA0 300 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Toe1Q9D2E2 511 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Cpn2Q9DBB9 547 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Klkb1P26262 638 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Mc3rP33033 323 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 TpoP35419 914 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Gpx3P46412 226 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 PitpnbP53811 271 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 ActbP60710 375 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Actg1P63260 375 aaKnown RBP12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Defb41Q30KP6 65 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Mfsd4aQ6PDC8 510 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Chst9Q76EC5 413 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Olfr744Q7TRM0 323 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 CyrenQ8BHZ5 157 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Nedd4lQ8CFI0 1004 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Cdt1Q8R4E9 557 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Dusp15Q8R4V2 235 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Med25Q8VCB2 745 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Q8WUR0 141 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 EtfdhQ921G7 616 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Rtl8cQ9D6I0 112 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 A0A286YDP4 300 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Vmn2r34E9PVI0 852 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Vmn2r41E9Q5C7 852 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Vmn2r40F6W043 852 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Vmn2r37F8VQD3 802 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Vmn2r36K7N741 852 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 PtgdsO09114 189 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Galr2O88854 371 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Hdac3O88895 424 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Hoxa10P31310 416 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 St3gal3P97325 374 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Foxd3Q61060 465 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Fbxw17Q8CFE8 466 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 B4galt7Q8R087 327 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Cacul1Q8R0X2 377 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Tmem268Q8R239 342 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Olfr1312Q8VF10 317 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Oas3Q8VI93 1138 aaKnown RBP12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 NrarpQ91ZA8 114 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Cadm3Q99N28 396 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Spns3Q9D232 514 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Phf6Q9D4J7 364 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Mmp19Q9JHI0 527 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Dock5B2RY04 1868 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Olfr1193A2AV13 318 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Cyp2j5O54749 501 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 F10O88947 481 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Cd93O89103 644 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 P01669 111 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Cst3P21460 140 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 ApodP51910 189 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Sox1P53783 391 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Olfr503Q7TRU8 323 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Cml2Q8CHQ9 238 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Dnajc22Q8CHS2 339 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Lmcd1Q8VEE1 365 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 NpntQ91V88 561 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 MmabQ9D273 237 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Asb12Q9D738 308 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Il23aQ9EQ14 196 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Adam28Q9JLN6 793 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Clca3a1Q9QX15 902 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Trpm6Q8CIR4 2028 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 1700023F06RikA2AB62 382 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Gpr155A2AWR3 868 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Skint10A7TZG1 354 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Gm20547B8JJN0 1276 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Scgb2b3D2XZ38 112 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 CfbP04186 761 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Sdc3Q64519 442 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Ablim3Q69ZX8 682 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Methig1Q76I26 264 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Olfr1161Q7TR29 321 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Olfr835Q7TRG7 311 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 2610318N02RikQ80VT5 305 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Slc16a14Q8K1C7 512 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Pttg1ipQ8R143 174 aa12.97□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Ddit4lQ8VHZ5 193 aa12.97□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 89.2 ms