RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 ITM2AO43736 263 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 EFNA2O43921 213 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 KIAA0513O60268 411 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 SCN2BO60939 215 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 UGT2B17O75795 530 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 CNOT4O95628 575 aaKnown RBP6.77□□□□□ -1.33
NPC1-208ENST00000590301 OPN1LWP04000 364 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 THBDP07204 575 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 PAX1P15863 534 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 IL32P24001 234 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 LOXP28300 417 aaPredicted RBP6.77□□□□□ -1.33
NPC1-208ENST00000590301 APOBEC1P41238 236 aaKnown RBP6.77□□□□□ -1.33
NPC1-208ENST00000590301 CLK1P49759 484 aaKnown RBP6.77□□□□□ -1.33
NPC1-208ENST00000590301 CCR4P51679 360 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 MAP2K6P52564 334 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 CSNK2A1P68400 391 aaPredicted RBP6.77□□□□□ -1.33
NPC1-208ENST00000590301 HPCAP84074 193 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 GNA13Q14344 377 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 CASP8Q14790 479 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 C11orf91Q3C1V1 193 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 TMEM176BQ3YBM2 270 aaPredicted RBP6.77□□□□□ -1.33
NPC1-208ENST00000590301 TNFAIP8L3Q5GJ75 292 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 PDZK1Q5T2W1 519 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 SAXO2Q658L1 398 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 OR4F3Q6IEY1 312 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 TFAP2EQ6VUC0 442 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 ZNF704Q6ZNC4 412 aaPredicted RBP6.77□□□□□ -1.33
NPC1-208ENST00000590301 PLEKHM3Q6ZWE6 761 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 SPATA19Q7Z5L4 167 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 CMIPQ8IY22 773 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 CLECL1Q8IZS7 167 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 GABRG1Q8N1C3 465 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 GLB1L3Q8NCI6 653 aaPredicted RBP6.77□□□□□ -1.33
NPC1-208ENST00000590301 OR5D16Q8NGK9 328 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 RAB3IL1Q8TBN0 382 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 ABHD3Q8WU67 409 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 HSD17B8Q92506 261 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 ZC3HAV1LQ96H79 300 aaKnown RBP6.77□□□□□ -1.33
NPC1-208ENST00000590301 CCDC115Q96NT0 180 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 SORT1Q99523 831 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 TMEM204Q9BSN7 226 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 POTEKPQ9BYX7 375 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 GSX2Q9BZM3 304 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 SERHL2Q9H4I8 314 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 COQ10BQ9H8M1 238 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 UBTD1Q9HAC8 227 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 MEAF6Q9HAF1 191 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 BCO1Q9HAY6 547 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 EXOSC3Q9NQT5 275 aaKnown RBP6.77□□□□□ -1.33
NPC1-208ENST00000590301 ACER3Q9NUN7 267 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 EMC3Q9P0I2 261 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 BTNL2Q9UIR0 455 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 LIPT1Q9Y234 373 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 WDR45Q9Y484 360 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 EML6Q6ZMW3 1958 aa6.77□□□□□ -1.33
NPC1-208ENST00000590301 NAV3Q8IVL0 2385 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 NPIPA5A0A0B4J1W7 369 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 TRPC5OSA6NMA1 111 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 ZNF724A8MTY0 619 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 NPIPA7E9PJI5 369 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 GPR171O14626 319 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 HS3ST1O14792 307 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 HDAC3O15379 428 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 FCMRO60667 390 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 CYTIPO60759 359 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 GCM2O75603 506 aaPredicted RBP6.76□□□□□ -1.33
NPC1-208ENST00000590301 FESP07332 822 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 INHBBP09529 407 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 NPIPA8P0DM63 369 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 UQCRBP14927 111 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 ATF4P18848 351 aaPredicted RBP6.76□□□□□ -1.33
NPC1-208ENST00000590301 BGNP21810 368 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 ENPP1P22413 925 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 SHC1P29353 583 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 ADSLP30566 484 aaPredicted RBP6.76□□□□□ -1.33
NPC1-208ENST00000590301 S100A3P33764 101 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 CHI3L1P36222 383 aaPredicted RBP6.76□□□□□ -1.33
NPC1-208ENST00000590301 HTR3AP46098 478 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 OR3A2P47893 321 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 SLC18A1P54219 525 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 RPS26P62854 115 aaKnown RBP6.76□□□□□ -1.33
NPC1-208ENST00000590301 MERTKQ12866 999 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 ITGADQ13349 1161 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 PDK3Q15120 406 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 GPR68Q15743 365 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 TOMM34Q15785 309 aaPredicted RBP6.76□□□□□ -1.33
NPC1-208ENST00000590301 FAM174BQ3ZCQ3 159 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 TIGD2Q4W5G0 525 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 SPANXN4Q5MJ08 99 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 Q5PR19 223 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 CEP85LQ5SZL2 805 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 SFRP5Q5T4F7 317 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 HHATQ5VTY9 493 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 ATG16L1Q676U5 607 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 ANKRD34AQ69YU3 496 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 ADAM5Q6NVV9 412 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 TMPPEQ6ZT21 453 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 Q6ZT83 130 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 P2RY8Q86VZ1 359 aa6.76□□□□□ -1.33
NPC1-208ENST00000590301 KRTAP1-3Q8IUG1 177 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms