RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 REEP3Q6NUK4 255 aa13.08□□□□□ -0.32
COMMD4-225ENST00000569245 CCDC80Q76M96 950 aa13.08□□□□□ -0.32
COMMD4-225ENST00000569245 ZAR1Q86SH2 424 aa13.08□□□□□ -0.32
COMMD4-225ENST00000569245 AQP12AQ8IXF9 295 aa13.08□□□□□ -0.32
COMMD4-225ENST00000569245 NFKBIDQ8NI38 313 aa13.08□□□□□ -0.32
COMMD4-225ENST00000569245 LRRC46Q96FV0 321 aa13.08□□□□□ -0.32
COMMD4-225ENST00000569245 PIGQQ9BRB3 760 aa13.08□□□□□ -0.32
COMMD4-225ENST00000569245 TRIM15Q9C019 465 aa13.08□□□□□ -0.32
COMMD4-225ENST00000569245 HOXD1Q9GZZ0 328 aa13.08□□□□□ -0.32
COMMD4-225ENST00000569245 BCL2L10Q9HD36 194 aa13.08□□□□□ -0.32
COMMD4-225ENST00000569245 ZNF629Q9UEG4 869 aaPredicted RBP13.08□□□□□ -0.32
COMMD4-225ENST00000569245 ANGPT4Q9Y264 503 aa13.08□□□□□ -0.32
COMMD4-225ENST00000569245 KCNE3Q9Y6H6 103 aa13.08□□□□□ -0.32
COMMD4-225ENST00000569245 CACNA1DQ01668 2161 aa13.08□□□□□ -0.32
COMMD4-225ENST00000569245 DCHS2Q6V1P9 2916 aa13.08□□□□□ -0.32
COMMD4-225ENST00000569245 ABCA12Q86UK0 2595 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 CLCA1A8K7I4 914 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 H0YHG0 523 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 H3BML4 177 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 SEC14L5O43304 696 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 GUSBP08236 651 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 PEPDP12955 493 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 ZNF708P17019 499 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 CTSSP25774 331 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 AGFG1P52594 562 aaKnown RBP13.07□□□□□ -0.32
COMMD4-225ENST00000569245 CLDN18P56856 261 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 PCBP3P57721 371 aaKnown RBP13.07□□□□□ -0.32
COMMD4-225ENST00000569245 B3GALT5-AS1P59052 145 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 CCNIQ14094 377 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 BCL2A1Q16548 175 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 SYPL1Q16563 259 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 ARHGAP11BQ3KRB8 267 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 DCST2Q5T1A1 773 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 ARSKQ6UWY0 536 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 PLXDC2Q6UX71 529 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 P4HA3Q7Z4N8 544 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 GRAMD2AQ8IUY3 354 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 C10orf67Q8IYJ2 551 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 ZNF295-AS1Q8N0V1 137 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 MEIOBQ8N635 442 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 C9orf106Q8NAJ2 232 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 ZNF527Q8NB42 609 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 CHDHQ8NE62 594 aaPredicted RBP13.07□□□□□ -0.32
COMMD4-225ENST00000569245 BHLHE22Q8NFJ8 381 aaPredicted RBP13.07□□□□□ -0.32
COMMD4-225ENST00000569245 SMPDL3BQ92485 455 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 FIG4Q92562 907 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 POP5Q969H6 163 aaKnown RBP13.07□□□□□ -0.32
COMMD4-225ENST00000569245 TMEM19Q96HH6 336 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 SH3YL1Q96HL8 342 aaPredicted RBP13.07□□□□□ -0.32
COMMD4-225ENST00000569245 LRGUKQ96M69 825 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 NSMCE2Q96MF7 247 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 TRNT1Q96Q11 434 aaKnown RBP13.07□□□□□ -0.32
COMMD4-225ENST00000569245 TM9SF2Q99805 663 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 CALML5Q9NZT1 146 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 VDAC3Q9Y277 283 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 ZNF337Q9Y3M9 751 aa13.07□□□□□ -0.32
COMMD4-225ENST00000569245 IGLV3-32A0A0A0MS00 114 aa13.06□□□□□ -0.32
COMMD4-225ENST00000569245 TCRBV3S1A0A5B6 114 aa13.06□□□□□ -0.32
COMMD4-225ENST00000569245 OR2M5A3KFT3 312 aa13.06□□□□□ -0.32
COMMD4-225ENST00000569245 MBD3L4A6NDZ8 208 aaPredicted RBP13.06□□□□□ -0.32
COMMD4-225ENST00000569245 MBD3L3A6NE82 208 aaPredicted RBP13.06□□□□□ -0.32
COMMD4-225ENST00000569245 MBD3L5A6NJ08 208 aaPredicted RBP13.06□□□□□ -0.32
COMMD4-225ENST00000569245 C5orf58C9J3I9 102 aa13.06□□□□□ -0.32
COMMD4-225ENST00000569245 H3BNH8 94 aa13.06□□□□□ -0.32
COMMD4-225ENST00000569245 LINC01387J3KSC0 135 aa13.06□□□□□ -0.32
COMMD4-225ENST00000569245 GCM2O75603 506 aaPredicted RBP13.06□□□□□ -0.32
COMMD4-225ENST00000569245 PGM3O95394 542 aa13.06□□□□□ -0.32
COMMD4-225ENST00000569245 BCHEP06276 602 aa13.06□□□□□ -0.32
COMMD4-225ENST00000569245 TMIGD3P0DMS9 266 aaPredicted RBP13.06□□□□□ -0.32
COMMD4-225ENST00000569245 NR2F1P10589 423 aa13.06□□□□□ -0.32
COMMD4-225ENST00000569245 KDELR2P33947 212 aa13.06□□□□□ -0.32
COMMD4-225ENST00000569245 OPRM1P35372 400 aa13.06□□□□□ -0.32
COMMD4-225ENST00000569245 RNF144AP50876 292 aaPredicted RBP13.06□□□□□ -0.32
COMMD4-225ENST00000569245 ZNF41P51814 821 aaPredicted RBP13.06□□□□□ -0.32
COMMD4-225ENST00000569245 ZNF136P52737 540 aa13.06□□□□□ -0.32
COMMD4-225ENST00000569245 CRISP3P54108 245 aa13.06□□□□□ -0.32
COMMD4-225ENST00000569245 TLE4Q04727 773 aa13.06□□□□□ -0.32
COMMD4-225ENST00000569245 MYBPHQ13203 477 aa13.06□□□□□ -0.32
COMMD4-225ENST00000569245 GLYR1Q49A26 553 aaPredicted RBP13.06□□□□□ -0.32
COMMD4-225ENST00000569245 FLYWCH1Q4VC44 716 aa13.06□□□□□ -0.32
COMMD4-225ENST00000569245 CYP2R1Q6VVX0 501 aa13.06□□□□□ -0.32
COMMD4-225ENST00000569245 LRRC74BQ6ZQY2 392 aa13.06□□□□□ -0.32
COMMD4-225ENST00000569245 C16orf62Q7Z3J2 963 aa13.06□□□□□ -0.32
COMMD4-225ENST00000569245 PATL1Q86TB9 770 aaKnown RBP13.06□□□□□ -0.32
COMMD4-225ENST00000569245 MISPQ8IVT2 679 aa13.06□□□□□ -0.32
COMMD4-225ENST00000569245 DMRTC2Q8IXT2 367 aaPredicted RBP13.06□□□□□ -0.32
COMMD4-225ENST00000569245 ANKFN1Q8N957 763 aa13.06□□□□□ -0.32
COMMD4-225ENST00000569245 MBD3L2Q8NHZ7 208 aaPredicted RBP13.06□□□□□ -0.32
COMMD4-225ENST00000569245 BBS10Q8TAM1 723 aa13.06□□□□□ -0.32
COMMD4-225ENST00000569245 PHOSPHO1Q8TCT1 267 aa13.06□□□□□ -0.32
COMMD4-225ENST00000569245 WNT2BQ93097 391 aa13.06□□□□□ -0.32
COMMD4-225ENST00000569245 FAM162AQ96A26 154 aa13.06□□□□□ -0.32
COMMD4-225ENST00000569245 INTS12Q96CB8 462 aaKnown RBP13.06□□□□□ -0.32
COMMD4-225ENST00000569245 TREX2Q9BQ50 279 aaPredicted RBP13.06□□□□□ -0.32
COMMD4-225ENST00000569245 STOML1Q9UBI4 398 aa13.06□□□□□ -0.32
COMMD4-225ENST00000569245 TACC2O95359 2948 aa13.06□□□□□ -0.32
COMMD4-225ENST00000569245 APCP25054 2843 aa13.06□□□□□ -0.32
COMMD4-225ENST00000569245 PKDREJQ9NTG1 2253 aa13.05□□□□□ -0.32
COMMD4-225ENST00000569245 PHF3Q92576 2039 aaKnown RBP13.05□□□□□ -0.32
COMMD4-225ENST00000569245 FBN2P35556 2912 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms