RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 NFATC3Q12968 1075 aa9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 DYNC1I2Q13409 638 aaKnown RBP9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 WIPI1Q5MNZ9 446 aaPredicted RBP9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 WDR88Q6ZMY6 472 aa9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 YRDCQ86U90 279 aaKnown RBP9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 AQP12AQ8IXF9 295 aa9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 FAM109AQ8N4B1 249 aa9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 BHLHE22Q8NFJ8 381 aaPredicted RBP9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 OR4K17Q8NGC6 315 aa9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 OR5M1Q8NGP8 315 aa9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 RNF217Q8TC41 542 aa9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 NR4A3Q92570 626 aa9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 C3orf49Q96BT1 292 aa9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 PYURFQ96I23 114 aa9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 TPD52L3Q96J77 140 aa9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 RNF145Q96MT1 663 aa9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 TSC22D3Q99576 134 aa9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 FAM192AQ9GZU8 254 aa9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 DEFB127Q9H1M4 99 aa9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 SLC6A15Q9H2J7 730 aa9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 DENND2DQ9H6A0 471 aaPredicted RBP9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 PAPOLBQ9NRJ5 636 aaKnown RBP9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 ACER3Q9NUN7 267 aa9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 ASF1BQ9NVP2 202 aa9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 QPCTLQ9NXS2 382 aa9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 NDUFAF4Q9P032 175 aa9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 SPRR3Q9UBC9 169 aa9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 BAG5Q9UL15 447 aa9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 A4GNTQ9UNA3 340 aa9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 VDAC3Q9Y277 283 aa9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 SH3GLB1Q9Y371 365 aa9.66□□□□□ -0.86
NPIPB3-210ENST00000542817 MYO18BQ8IUG5 2567 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 A0A0B4J2E0 115 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 A0A1B0GX12 115 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 OR2M5A3KFT3 312 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 NPIPA5E9PKD4 350 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 J3KTA2 159 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 FMO6PO60774 539 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 IFNA14P01570 189 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 ZNF24P17028 368 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 GDF1P27539 372 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 SHC1P29353 583 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 SLC6A8P48029 635 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 IDH2P48735 452 aaKnown RBP9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 RPS6KA3P51812 740 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 MLLT10P55197 1068 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 ACTR3P61158 418 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 HSF1Q00613 529 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 PLGLB1Q02325 96 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 FOXF1Q12946 379 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 CBFBQ13951 182 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 GANABQ14697 944 aaKnown RBP9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 GLYR1Q49A26 553 aaPredicted RBP9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 IFI44LQ53G44 452 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 MTX3Q5HYI7 312 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 DCST1Q5T197 706 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 LINC00114Q6XXX2 140 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 ZNF550Q7Z398 422 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 ZNF605Q86T29 641 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 ATG4DQ86TL0 474 aaPredicted RBP9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 SLC22A16Q86VW1 577 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 ADGRG3Q86Y34 549 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 ZNF440Q8IYI8 595 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 GTPBP8Q8N3Z3 284 aaPredicted RBP9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 DRAXINQ8NBI3 349 aaPredicted RBP9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 VANGL1Q8TAA9 524 aaPredicted RBP9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 CANT1Q8WVQ1 401 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 FAR1Q8WVX9 515 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 RASSF5Q8WWW0 418 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 ITFG2Q969R8 447 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 PRSS27Q9BQR3 290 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 FUZQ9BT04 418 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 MAN2C1Q9NTJ4 1040 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 ADPRHL2Q9NX46 363 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 TAS2R10Q9NYW0 307 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 RPS6KA6Q9UK32 745 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 ACAD8Q9UKU7 415 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 NPIPA1Q9UND3 350 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 SAMD4AQ9UPU9 718 aaKnown RBP9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 SLC6A5Q9Y345 797 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 V9GYQ6 96 aa9.65□□□□□ -0.86
NPIPB3-210ENST00000542817 ADGRG4Q8IZF6 3080 aa9.65□□□□□ -0.87
NPIPB3-210ENST00000542817 IGKV1D-42A0A075B6H8 117 aa9.64□□□□□ -0.87
NPIPB3-210ENST00000542817 A0A087WZY1 265 aa9.64□□□□□ -0.87
NPIPB3-210ENST00000542817 A0A1B0GWA3 101 aa9.64□□□□□ -0.87
NPIPB3-210ENST00000542817 HK1P19367 917 aa9.64□□□□□ -0.87
NPIPB3-210ENST00000542817 PGCP20142 388 aa9.64□□□□□ -0.87
NPIPB3-210ENST00000542817 TCEA1P23193 301 aaKnown RBP9.64□□□□□ -0.87
NPIPB3-210ENST00000542817 SLC1A3P43003 542 aa9.64□□□□□ -0.87
NPIPB3-210ENST00000542817 CCR4P51679 360 aa9.64□□□□□ -0.87
NPIPB3-210ENST00000542817 RGS8P57771 180 aaPredicted RBP9.64□□□□□ -0.87
NPIPB3-210ENST00000542817 LSM11P83369 360 aaKnown RBP eCLIP9.64□□□□□ -0.875e-8■□□□□ 11.1
NPIPB3-210ENST00000542817 ALDH6A1Q02252 535 aaKnown RBP9.64□□□□□ -0.87
NPIPB3-210ENST00000542817 KCNC4Q03721 635 aa9.64□□□□□ -0.87
NPIPB3-210ENST00000542817 PIN1Q13526 163 aaPredicted RBP9.64□□□□□ -0.87
NPIPB3-210ENST00000542817 FLOT2Q14254 428 aa9.64□□□□□ -0.87
NPIPB3-210ENST00000542817 SLC10A1Q14973 349 aa9.64□□□□□ -0.87
NPIPB3-210ENST00000542817 KPNB1Q14974 876 aaKnown RBP9.64□□□□□ -0.87
NPIPB3-210ENST00000542817 OR1Q1Q15612 314 aa9.64□□□□□ -0.87
NPIPB3-210ENST00000542817 NHSL2Q5HYW2 709 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms