RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 IGKV3-20P01619 116 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 RFX3P48380 749 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 STXBP1P61764 594 aaKnown RBP3.33□□□□□ -1.88
YBX3-205ENST00000536107 LMO4P61968 165 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 TBPL1P62380 186 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 LCN2P80188 198 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 SLC25A11Q02978 314 aaKnown RBP3.33□□□□□ -1.88
YBX3-205ENST00000536107 POU6F1Q14863 301 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 RBBP5Q15291 538 aaKnown RBP3.33□□□□□ -1.88
YBX3-205ENST00000536107 ODF2Q5BJF6 829 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 TFAP2EQ6VUC0 442 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 ZNF813Q6ZN06 617 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 ZNF620Q6ZNG0 422 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 NUP54Q7Z3B4 507 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 NUFIP2Q7Z417 695 aaKnown RBP3.33□□□□□ -1.88
YBX3-205ENST00000536107 WDFY1Q8IWB7 410 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 ZNF567Q8N184 647 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 UBE2J2Q8N2K1 259 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 GALNT4Q8N4A0 578 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 METTL25Q8N6Q8 603 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 IL17RDQ8NFM7 739 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 FBXO30Q8TB52 745 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 NT5CQ8TCD5 201 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 TFB1MQ8WVM0 346 aaKnown RBP3.33□□□□□ -1.88
YBX3-205ENST00000536107 KTI12Q96EK9 354 aaPredicted RBP3.33□□□□□ -1.88
YBX3-205ENST00000536107 ADGRG7Q96K78 797 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 CSF3RQ99062 836 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 NPLQ9BXD5 320 aaPredicted RBP3.33□□□□□ -1.88
YBX3-205ENST00000536107 TPK1Q9H3S4 243 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 COPS7BQ9H9Q2 264 aaPredicted RBP3.33□□□□□ -1.88
YBX3-205ENST00000536107 DUSP22Q9NRW4 184 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 SLC6A13Q9NSD5 602 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 INTS10Q9NVR2 710 aaKnown RBP3.33□□□□□ -1.88
YBX3-205ENST00000536107 FAM120CQ9NX05 1096 aaKnown RBP3.33□□□□□ -1.88
YBX3-205ENST00000536107 LIMA1Q9UHB6 759 aaKnown RBP3.33□□□□□ -1.88
YBX3-205ENST00000536107 ANAPC7Q9UJX3 599 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 ANAPC5Q9UJX4 755 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 ICAM5Q9UMF0 924 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 CLDN16Q9Y5I7 305 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 SOX21Q9Y651 276 aaPredicted RBP3.33□□□□□ -1.88
YBX3-205ENST00000536107 AUP1Q9Y679 476 aa3.33□□□□□ -1.88
YBX3-205ENST00000536107 FRAS1Q86XX4 4008 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 DNAH7Q8WXX0 4024 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 GOLGA8QA0A0J9YX86 632 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 TRBC2A0A5B9 178 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 GOLGA8OA6NCC3 632 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 OR6C76A6NM76 312 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 SRRM5B3KS81 715 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 GOLGA8NF8WBI6 632 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 H7C0S8 307 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 GOLGA8RI6L899 631 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 hCG_2039718K7EN88 272 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 PRMT5O14744 637 aaPredicted RBP3.32□□□□□ -1.88
YBX3-205ENST00000536107 ERI3O43414 337 aaKnown RBP3.32□□□□□ -1.88
YBX3-205ENST00000536107 ZBTB14O43829 449 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 CXCL13O43927 109 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 SLC43A1O75387 559 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 PSIP1O75475 530 aaKnown RBP3.32□□□□□ -1.88
YBX3-205ENST00000536107 NDUFS3O75489 264 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 RAD51DO75771 328 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 ZNF432O94892 652 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 FTLP02792 175 aaPredicted RBP3.32□□□□□ -1.88
YBX3-205ENST00000536107 OPN1LWP04000 364 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 IGKV3-11P04433 115 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 IFNW1P05000 195 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 ABCB1P08183 1280 aaPredicted RBP3.32□□□□□ -1.88
YBX3-205ENST00000536107 ADRA2AP08913 450 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 PABPC4LP0CB38 370 aaKnown RBP3.32□□□□□ -1.88
YBX3-205ENST00000536107 CTNNA2P26232 953 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 EEF1GP26641 437 aaKnown RBP3.32□□□□□ -1.88
YBX3-205ENST00000536107 ABCD3P28288 659 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 RPL22P35268 128 aaKnown RBP3.32□□□□□ -1.88
YBX3-205ENST00000536107 FEN1P39748 380 aaKnown RBP3.32□□□□□ -1.88
YBX3-205ENST00000536107 RAD52P43351 418 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 STT3AP46977 705 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 PLA2G16P53816 162 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 LIM2P55344 173 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 DSCR4P56555 118 aaPredicted RBP3.32□□□□□ -1.88
YBX3-205ENST00000536107 TMEM33P57088 247 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 B3GALT5-AS1P59052 145 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 PLIN5Q00G26 463 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 PLCXD2Q0VAA5 305 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 WASHC5Q12768 1159 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 SNTA1Q13424 505 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 SPARCL1Q14515 664 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 SLMAPQ14BN4 828 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 HERPUD1Q15011 391 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 EBPQ15125 230 aaKnown RBP3.32□□□□□ -1.88
YBX3-205ENST00000536107 NNATQ16517 81 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 PPP1R3AQ16821 1122 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 KLHL38Q2WGJ6 581 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 SH2D4BQ5SQS7 431 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 AVPI1Q5T686 147 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 LGSNQ5TDP6 509 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 ATL3Q6DD88 541 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 ITPRIPL1Q6GPH6 555 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 CASC4Q6P4E1 433 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 RANBP10Q6VN20 620 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 Q6ZT83 130 aa3.32□□□□□ -1.88
YBX3-205ENST00000536107 LHFPL2Q6ZUX7 228 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms