RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 HSPB2A8KAH6 182 aa20.44■□□□□ 0.86
SFSWAP-204ENST00000535399 AP3D1O14617 1153 aa20.44■□□□□ 0.86
SFSWAP-204ENST00000535399 ADAMDEC1O15204 470 aa20.44■□□□□ 0.86
SFSWAP-204ENST00000535399 PABPC4LP0CB38 370 aaKnown RBP20.44■□□□□ 0.86
SFSWAP-204ENST00000535399 COX4I1P13073 169 aa20.44■□□□□ 0.86
SFSWAP-204ENST00000535399 GP1BBP13224 206 aa20.44■□□□□ 0.86
SFSWAP-204ENST00000535399 SLC6A2P23975 617 aa20.44■□□□□ 0.86
SFSWAP-204ENST00000535399 HSPB2Q16082 182 aa20.44■□□□□ 0.86
SFSWAP-204ENST00000535399 CHMP1BQ7LBR1 199 aa20.44■□□□□ 0.86
SFSWAP-204ENST00000535399 GRAMD2AQ8IUY3 354 aa20.44■□□□□ 0.86
SFSWAP-204ENST00000535399 LILRA2Q8N149 483 aa20.44■□□□□ 0.86
SFSWAP-204ENST00000535399 C11orf65Q8NCR3 313 aa20.44■□□□□ 0.86
SFSWAP-204ENST00000535399 OR8J3Q8NGG0 315 aa20.44■□□□□ 0.86
SFSWAP-204ENST00000535399 TMEM234Q8WY98 164 aa20.44■□□□□ 0.86
SFSWAP-204ENST00000535399 ZNF845Q96IR2 970 aaPredicted RBP20.44■□□□□ 0.86
SFSWAP-204ENST00000535399 SPATA9Q9BWV2 254 aa20.44■□□□□ 0.86
SFSWAP-204ENST00000535399 CACYBPQ9HB71 228 aaKnown RBP20.44■□□□□ 0.86
SFSWAP-204ENST00000535399 A0A0J9YW62 118 aa20.43■□□□□ 0.86
SFSWAP-204ENST00000535399 EIF1AYO14602 144 aaKnown RBP20.43■□□□□ 0.86
SFSWAP-204ENST00000535399 TGM6O95932 706 aa20.43■□□□□ 0.86
SFSWAP-204ENST00000535399 IL2RAP01589 272 aa20.43■□□□□ 0.86
SFSWAP-204ENST00000535399 ME2P23368 584 aa20.43■□□□□ 0.86
SFSWAP-204ENST00000535399 HTR1EP28566 365 aa20.43■□□□□ 0.86
SFSWAP-204ENST00000535399 GRNP28799 593 aaKnown RBP20.43■□□□□ 0.86
SFSWAP-204ENST00000535399 ZNF136P52737 540 aa20.43■□□□□ 0.86
SFSWAP-204ENST00000535399 RBBP4Q09028 425 aa20.43■□□□□ 0.86
SFSWAP-204ENST00000535399 EPS8Q12929 822 aa20.43■□□□□ 0.86
SFSWAP-204ENST00000535399 CYP51A1Q16850 503 aa20.43■□□□□ 0.86
SFSWAP-204ENST00000535399 ZSWIM7Q19AV6 140 aa20.43■□□□□ 0.86
SFSWAP-204ENST00000535399 RABL3Q5HYI8 236 aa20.43■□□□□ 0.86
SFSWAP-204ENST00000535399 ZNF311Q5JNZ3 666 aa20.43■□□□□ 0.86
SFSWAP-204ENST00000535399 HIST2H2BCQ6DN03 193 aa20.43■□□□□ 0.86
SFSWAP-204ENST00000535399 ESPNLQ6ZVH7 1005 aa20.43■□□□□ 0.86
SFSWAP-204ENST00000535399 PLEKHM3Q6ZWE6 761 aa20.43■□□□□ 0.86
SFSWAP-204ENST00000535399 SERPINA11Q86U17 422 aa20.43■□□□□ 0.86
SFSWAP-204ENST00000535399 ZZZ3Q8IYH5 903 aa20.43■□□□□ 0.86
SFSWAP-204ENST00000535399 ZNF440Q8IYI8 595 aa20.43■□□□□ 0.86
SFSWAP-204ENST00000535399 HIPK4Q8NE63 616 aa20.43■□□□□ 0.86
SFSWAP-204ENST00000535399 OR10A6Q8NH74 314 aa20.43■□□□□ 0.86
SFSWAP-204ENST00000535399 KLHL15Q96M94 604 aa20.43■□□□□ 0.86
SFSWAP-204ENST00000535399 PINK1Q9BXM7 581 aa20.43■□□□□ 0.86
SFSWAP-204ENST00000535399 UCK2Q9BZX2 261 aa20.43■□□□□ 0.86
SFSWAP-204ENST00000535399 GID8Q9NWU2 228 aa20.43■□□□□ 0.86
SFSWAP-204ENST00000535399 HEATR5AQ86XA9 2040 aa20.43■□□□□ 0.86
SFSWAP-204ENST00000535399 CFAP73A6NFT4 308 aa20.42■□□□□ 0.86
SFSWAP-204ENST00000535399 FAM90A27PA6NNH2 459 aa20.42■□□□□ 0.86
SFSWAP-204ENST00000535399 PRSS44E7EML9 344 aa20.42■□□□□ 0.86
SFSWAP-204ENST00000535399 FAAHO00519 579 aa20.42■□□□□ 0.86
SFSWAP-204ENST00000535399 TNFSF11O14788 317 aa20.42■□□□□ 0.86
SFSWAP-204ENST00000535399 RCBTB2O95199 551 aa20.42■□□□□ 0.86
SFSWAP-204ENST00000535399 COL8A1P27658 744 aa20.42■□□□□ 0.86
SFSWAP-204ENST00000535399 SFTPDP35247 375 aa20.42■□□□□ 0.86
SFSWAP-204ENST00000535399 IDH2P48735 452 aaKnown RBP20.42■□□□□ 0.86
SFSWAP-204ENST00000535399 PCBP3P57721 371 aaKnown RBP20.42■□□□□ 0.86
SFSWAP-204ENST00000535399 RPS3AP61247 264 aaKnown RBP20.42■□□□□ 0.86
SFSWAP-204ENST00000535399 MERTKQ12866 999 aa20.42■□□□□ 0.86
SFSWAP-204ENST00000535399 SELENBP1Q13228 472 aa20.42■□□□□ 0.86
SFSWAP-204ENST00000535399 POMZP3Q6PJE2 187 aa20.42■□□□□ 0.86
SFSWAP-204ENST00000535399 CALHM3Q86XJ0 350 aa20.42■□□□□ 0.86
SFSWAP-204ENST00000535399 OR10D3Q8NH80 312 aa20.42■□□□□ 0.86
SFSWAP-204ENST00000535399 OR2V1Q8NHB1 315 aa20.42■□□□□ 0.86
SFSWAP-204ENST00000535399 ZNF563Q8TA94 476 aa20.42■□□□□ 0.86
SFSWAP-204ENST00000535399 FIG4Q92562 907 aa20.42■□□□□ 0.86
SFSWAP-204ENST00000535399 TM9SF2Q99805 663 aa20.42■□□□□ 0.86
SFSWAP-204ENST00000535399 SH3GL1Q99961 368 aa20.42■□□□□ 0.86
SFSWAP-204ENST00000535399 ANGPT4Q9Y264 503 aa20.42■□□□□ 0.86
SFSWAP-204ENST00000535399 ARL2BPQ9Y2Y0 163 aa20.42■□□□□ 0.86
SFSWAP-204ENST00000535399 ZNF175Q9Y473 711 aa20.42■□□□□ 0.86
SFSWAP-204ENST00000535399 KIAA1549Q9HCM3 1950 aa20.42■□□□□ 0.86
SFSWAP-204ENST00000535399 SLC22A20A6NK97 555 aa20.41■□□□□ 0.86
SFSWAP-204ENST00000535399 GKN3PP0CG01 181 aa20.41■□□□□ 0.86
SFSWAP-204ENST00000535399 AQP1P29972 269 aa20.41■□□□□ 0.86
SFSWAP-204ENST00000535399 PRKAR1BP31321 381 aa20.41■□□□□ 0.86
SFSWAP-204ENST00000535399 ACAA2P42765 397 aaKnown RBP20.41■□□□□ 0.86
SFSWAP-204ENST00000535399 EIF1AXP47813 144 aaKnown RBP20.41■□□□□ 0.86
SFSWAP-204ENST00000535399 KRT73Q86Y46 540 aa20.41■□□□□ 0.86
SFSWAP-204ENST00000535399 ATP6V1C2Q8NEY4 427 aa20.41■□□□□ 0.86
SFSWAP-204ENST00000535399 ARMC7Q9H6L4 198 aa20.41■□□□□ 0.86
SFSWAP-204ENST00000535399 GCM2O75603 506 aaPredicted RBP20.4■□□□□ 0.86
SFSWAP-204ENST00000535399 TMIGD3P0DMS9 266 aaPredicted RBP20.4■□□□□ 0.86
SFSWAP-204ENST00000535399 CTSSP25774 331 aa20.4■□□□□ 0.86
SFSWAP-204ENST00000535399 PCGF2P35227 344 aa20.4■□□□□ 0.86
SFSWAP-204ENST00000535399 PON3Q15166 354 aa20.4■□□□□ 0.86
SFSWAP-204ENST00000535399 TMEM176BQ3YBM2 270 aaPredicted RBP20.4■□□□□ 0.86
SFSWAP-204ENST00000535399 HBMQ6B0K9 141 aa20.4■□□□□ 0.86
SFSWAP-204ENST00000535399 DHRS4L2Q6PKH6 230 aa20.4■□□□□ 0.86
SFSWAP-204ENST00000535399 GRINAQ7Z429 371 aa20.4■□□□□ 0.86
SFSWAP-204ENST00000535399 P4HA3Q7Z4N8 544 aa20.4■□□□□ 0.86
SFSWAP-204ENST00000535399 COMTD1Q86VU5 262 aa20.4■□□□□ 0.86
SFSWAP-204ENST00000535399 RELL2Q8NC24 303 aaPredicted RBP20.4■□□□□ 0.86
SFSWAP-204ENST00000535399 FNDC9Q8TBE3 224 aa20.4■□□□□ 0.86
SFSWAP-204ENST00000535399 ZFP3Q96NJ6 502 aa20.4■□□□□ 0.86
SFSWAP-204ENST00000535399 CCT8L2Q96SF2 557 aa20.4■□□□□ 0.86
SFSWAP-204ENST00000535399 GPATCH1Q9BRR8 931 aaKnown RBP20.4■□□□□ 0.86
SFSWAP-204ENST00000535399 SPATA5L1Q9BVQ7 753 aa20.4■□□□□ 0.86
SFSWAP-204ENST00000535399 PIF1Q9H611 641 aa20.4■□□□□ 0.86
SFSWAP-204ENST00000535399 CTPS2Q9NRF8 586 aa20.4■□□□□ 0.86
SFSWAP-204ENST00000535399 PAQR5Q9NXK6 330 aaPredicted RBP20.4■□□□□ 0.86
SFSWAP-204ENST00000535399 ZNF629Q9UEG4 869 aaPredicted RBP20.4■□□□□ 0.86
SFSWAP-204ENST00000535399 NKX2-6A6NCS4 301 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms