RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 SPRR3Q9UBC9 169 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 DCDC2Q9UHG0 476 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 ZNF223Q9UK11 482 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 POU2F3Q9UKI9 436 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 IKZF3Q9UKT9 509 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 NDRG4Q9ULP0 352 aaKnown RBP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 PCDHGB4Q9UN71 923 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 EXO1Q9UQ84 846 aaKnown RBP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 DLGAP4Q9Y2H0 992 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 RNF11Q9Y3C5 154 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 FAM215AQ9Y5M1 114 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 WIF1Q9Y5W5 379 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 CHCHD2Q9Y6H1 151 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 HEATR5BQ9P2D3 2071 aa3.4□□□□□ -1.87
HMGN1P11-201ENST00000508668 CCDC168Q8NDH2 2452 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 C2CD3Q4AC94 2353 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 PKDREJQ9NTG1 2253 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 A0A0A6YYD5 115 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 MBD3L5A6NJ08 208 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 VWC2LB2RUY7 222 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 TMEM114B3SHH9 223 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 TRIM49D1C9J1S8 452 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 C4orf51C9J302 202 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 KIF2AO00139 706 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 PLOD2O00469 737 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 PGRMC2O15173 223 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 CFLARO15519 480 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 GMFGO60234 142 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 TMPRSS11DO60235 418 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 SEC22BO75396 215 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 SOX30O94993 753 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 RCBTB2O95199 551 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 SIX3O95343 332 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 HSPA4LO95757 839 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 PDYNP01213 254 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 IGKV3-11P04433 115 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 ENO1P06733 434 aaKnown RBP3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 ABCB1P08183 1280 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 VIMP08670 466 aaKnown RBP3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 RFPL3SP0C7P2 107 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 MYL2P10916 166 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 UQCRBP14927 111 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 CPN1P15169 458 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 IGFBP2P18065 325 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 TBXA2RP21731 343 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 GPX3P22352 226 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 ATP5F1P24539 256 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 IVDP26440 423 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 PTPN6P29350 595 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 PPIFP30405 207 aaKnown RBP3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 CEACAM8P31997 349 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 BSGP35613 385 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 HPCAL1P37235 193 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 RPL3P39023 403 aaKnown RBP3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 CD79BP40259 229 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 PRIM2P49643 509 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 NAGLUP54802 743 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 PKNOX1P55347 436 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 IGLV3-21P80748 117 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 MRPS25P82663 173 aaKnown RBP3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 HPCAP84074 193 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 LTBQ06643 244 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 KRTAP1-1Q07627 177 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 IFFO1Q0D2I5 559 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 FUT7Q11130 342 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 FOXO1Q12778 655 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 FOXD4Q12950 439 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 LCP2Q13094 533 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 DAG1Q14118 895 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 EXOSC7Q15024 291 aaKnown RBP3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 BCL2A1Q16548 175 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 WHAMMP3Q1A5X7 153 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 FBXL19-AS1Q494R0 122 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 GLE1Q53GS7 698 aaKnown RBP3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 BEX5Q5H9J7 111 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 NHSL2Q5HYW2 709 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 Q5PR19 223 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 RTL6Q6ICC9 239 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 OR5M10Q6IEU7 315 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 ADNP2Q6IQ32 1131 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 SYT10Q6XYQ8 523 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 SSX8Q7RTT4 187 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 R3HCC1LQ7Z5L2 792 aaKnown RBP3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 YTHDF3Q7Z739 585 aaKnown RBP3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 PEG10Q86TG7 708 aaKnown RBP3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 MISPQ8IVT2 679 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 METTL4Q8N3J2 472 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 RNF175Q8N4F7 328 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 C1orf52Q8N6N3 182 aaKnown RBP3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 TMCO5AQ8N6Q1 288 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 AMER2Q8N7J2 671 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 ZNF614Q8N883 585 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 L3MBTL4Q8NA19 623 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 OR4F6Q8NGB9 312 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 MBD3L2Q8NHZ7 208 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 FBXO25Q8TCJ0 367 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 SLC9A6Q92581 669 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 NRGNQ92686 78 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 KAT2AQ92830 837 aa3.39□□□□□ -1.87
HMGN1P11-201ENST00000508668 EFHD2Q96C19 240 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms