RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 FBXL6Q8N531 539 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 LINC01555Q8NAE3 123 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 DNAAF1Q8NEP3 725 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 OR52B4Q8NGK2 314 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 OR52N1Q8NH53 320 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 OR5K2Q8NHB8 316 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 APOBEC4Q8WW27 367 aaKnown RBP11.81□□□□□ -0.52
VPS52-218ENST00000482399 OR2M2Q96R28 347 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 ACTRT3Q9BYD9 372 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 MCOLN1Q9GZU1 580 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 PCBD2Q9H0N5 130 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 TCF7L1Q9HCS4 588 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 FBXO34Q9NWN3 711 aa11.81□□□□□ -0.52
VPS52-218ENST00000482399 ZNF443Q9Y2A4 671 aaPredicted RBP11.81□□□□□ -0.52
VPS52-218ENST00000482399 ZNF593O00488 134 aaPredicted RBP11.8□□□□□ -0.52
VPS52-218ENST00000482399 MAKP20794 623 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 DDX6P26196 483 aaKnown RBP eCLIP11.8□□□□□ -0.52
VPS52-218ENST00000482399 RPS27P42677 84 aaKnown RBP11.8□□□□□ -0.52
VPS52-218ENST00000482399 SEC13P55735 322 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 FUT5Q11128 374 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 C3P1Q6ZMU1 363 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 UBE3DQ7Z6J8 389 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 BPHLQ86WA6 291 aaPredicted RBP11.8□□□□□ -0.52
VPS52-218ENST00000482399 IQCF2Q8IXL9 164 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 MS4A15Q8N5U1 240 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 ANGPTL6Q8NI99 470 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 NKD1Q969G9 470 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 FOXN4Q96NZ1 517 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 C1QTNF2Q9BXJ5 285 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 GSX2Q9BZM3 304 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 C20orf85Q9H1P6 137 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.8□□□□□ -0.52
VPS52-218ENST00000482399 ASB6Q9NWX5 421 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 TBC1D3DA0A087WVF3 549 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 TBC1D3IA0A087WXS9 549 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 TBC1D3EA0A087X179 549 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 TBC1D3KA0A087X1G2 549 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 A0A1W2PP55 124 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 TBC1D3FA6NER0 549 aaPredicted RBP11.8□□□□□ -0.52
VPS52-218ENST00000482399 KDM4EB2RXH2 506 aaPredicted RBP11.8□□□□□ -0.52
VPS52-218ENST00000482399 IDSB3KWA1 339 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 TBC1D3LB9A6J9 549 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 OLFM2O95897 454 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 ANKRD34CP0C6C1 535 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 TBC1D3HP0C7X1 549 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 ZNF888P0CJ79 500 aaPredicted RBP11.8□□□□□ -0.52
VPS52-218ENST00000482399 NPR2P20594 1047 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 FPR3P25089 353 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 RAD52P43351 418 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 RAB28P51157 221 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 OR1Q1Q15612 314 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 AANATQ16613 207 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 DUSP5Q16690 384 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 DUSP6Q16828 381 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 BEX5Q5H9J7 111 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 EOGTQ5NDL2 527 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 SFRP5Q5T4F7 317 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 YOD1Q5VVQ6 348 aaPredicted RBP11.8□□□□□ -0.52
VPS52-218ENST00000482399 TBC1D3GQ6DHY5 549 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 ELP2Q6IA86 826 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 TBC1D3CQ6IPX1 549 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 NIPAL3Q6P499 406 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 ARSKQ6UWY0 536 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 IDO2Q6ZQW0 420 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 MBOAT2Q6ZWT7 520 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 TMPRSS12Q86WS5 348 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 LRRC56Q8IYG6 542 aaPredicted RBP11.8□□□□□ -0.52
VPS52-218ENST00000482399 TBC1D3Q8IZP1 549 aaPredicted RBP11.8□□□□□ -0.52
VPS52-218ENST00000482399 HDDC3Q8N4P3 179 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 OR7G2Q8NG99 324 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 OR52I2Q8NH67 350 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 DIO2Q92813 273 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 LMAN2LQ9H0V9 348 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 LHX9Q9NQ69 397 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 IER3IP1Q9Y5U9 82 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 H3BUI4 141 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 TBX6O95947 436 aaPredicted RBP11.8□□□□□ -0.52
VPS52-218ENST00000482399 CTSAP10619 480 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 CTNNB1P35222 781 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 CDK3Q00526 305 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 C19orf57Q0VDD7 668 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 PON3Q15166 354 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 VITQ6UXI7 678 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 RFLNBQ8N5W9 214 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 POGLUT1Q8NBL1 392 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 OR52E1Q8NGJ3 308 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 OR2T4Q8NH00 348 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 RBPMSQ93062 196 aaKnown RBP11.8□□□□□ -0.52
VPS52-218ENST00000482399 PDCD10Q9BUL8 212 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 NOX3Q9HBY0 568 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 SRA1Q9HD15 236 aaKnown RBP11.8□□□□□ -0.52
VPS52-218ENST00000482399 LIPT1Q9Y234 373 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 ASB4Q9Y574 426 aa11.8□□□□□ -0.52
VPS52-218ENST00000482399 LOC105371267A0A1B0GV96 52 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 A0A1B0GVI7 797 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 TRAPPC13A5PLN9 417 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 PEX14O75381 377 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 ADH1CP00326 375 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 SLC35G6P0C7Q6 338 aa11.79□□□□□ -0.52
VPS52-218ENST00000482399 MAP2K6P52564 334 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms