RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 MMEL1Q495T6 779 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 TTMPQ5BVD1 217 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 TCP11X2Q5H9J9 407 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 C1QTNF12Q5T7M4 302 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 KHDRBS2Q5VWX1 349 aaKnown RBP5.47□□□□□ -1.53
HDAC3-206ENST00000471968 MRNIPQ6NTE8 343 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 UNQ9370/PRO34162Q6UXP9 181 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 TUBA1AQ71U36 451 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 LDLRAD3Q86YD5 345 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 HSCBQ8IWL3 235 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 KRT78Q8N1N4 520 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 ZNF527Q8NB42 609 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 ATP6V1C2Q8NEY4 427 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 OR2T6Q8NHC8 308 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 POC1BQ8TC44 478 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 CD200R1Q8TD46 325 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 CCL17Q92583 94 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 MFSD3Q96ES6 412 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 GPR21Q99679 349 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 MYLK2Q9H1R3 596 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 CHRAC1Q9NRG0 131 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 ACOXLQ9NUZ1 547 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 MED17Q9NVC6 651 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 EMC3Q9P0I2 261 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 ZMAT5Q9UDW3 170 aaKnown RBP5.47□□□□□ -1.53
HDAC3-206ENST00000471968 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.47□□□□□ -1.53
HDAC3-206ENST00000471968 IL20RAQ9UHF4 553 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 MED16Q9Y2X0 877 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 TCAF1Q9Y4C2 921 aa5.47□□□□□ -1.53
HDAC3-206ENST00000471968 RNF213Q63HN8 5207 aa5.46□□□□□ -1.53
HDAC3-206ENST00000471968 MYCBP2O75592 4640 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 IGHV2OR16-5A0A0B4J2B6 119 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 A0A0U1RQK1 487 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 KRTAP9-6A0A140TA67 174 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 A0A1W2PNR3 127 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 A0A1W2PR48 441 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 C7orf72A4D263 438 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 A8MXK9 166 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 PFDN6O15212 129 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 MRPL33O75394 65 aaKnown RBP5.46□□□□□ -1.54
HDAC3-206ENST00000471968 DEDDO75618 318 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 IGLV1-44P01699 117 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 CT45A8P0DMV1 189 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 CT45A9P0DMV2 189 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 PIK3R1P27986 724 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 CLK3P49761 638 aaKnown RBP5.46□□□□□ -1.54
HDAC3-206ENST00000471968 EMDP50402 254 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 ZNF41P51814 821 aaPredicted RBP5.46□□□□□ -1.54
HDAC3-206ENST00000471968 C17orf67Q0P5P2 114 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 IFT88Q13099 833 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 LAPTM5Q13571 262 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 ESCO2Q56NI9 601 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 CT45A2Q5DJT8 189 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 CENPUQ71F23 418 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 LINC00523Q86TU6 105 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 MAPKAPK5-AS1Q8N8E1 139 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 SPERTQ8NA61 448 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 OR4N2Q8NGD1 307 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 CEP70Q8NHQ1 597 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 PPP1R35Q8TAP8 253 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 ZFP90Q8TF47 636 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 IPCEF1Q8WWN9 437 aaPredicted RBP5.46□□□□□ -1.54
HDAC3-206ENST00000471968 FBXL8Q96CD0 374 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 ITCHQ96J02 903 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 FAM167BQ9BTA0 163 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 NOX3Q9HBY0 568 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 OBP2BQ9NPH6 170 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 EXD2Q9NVH0 621 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 CTTNBP2NLQ9P2B4 639 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 CRNNQ9UBG3 495 aaPredicted RBP5.46□□□□□ -1.54
HDAC3-206ENST00000471968 EGFL7Q9UHF1 273 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 DUSP13Q9UII6 198 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 DHRS7Q9Y394 339 aa5.46□□□□□ -1.54
HDAC3-206ENST00000471968 PKD1P98161 4303 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 IGLV3-32A0A0A0MS00 114 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 IGHV2-70DA0A0C4DH43 119 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 MACROD2A1Z1Q3 448 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 GJE1A6NN92 205 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 NR5A2O00482 541 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 PGRMC2O15173 223 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 RAMP3O60896 148 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 TTC4O95801 387 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 ANGPTL1O95841 491 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 SBK2P0C263 348 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 CPMP14384 443 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 GNAZP19086 355 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 SLC7A1P30825 629 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 GRIA1P42261 906 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 KIR2DS4P43632 304 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 PTDSS1P48651 473 aaKnown RBP5.45□□□□□ -1.54
HDAC3-206ENST00000471968 XKP51811 444 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 RAC3P60763 192 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 UBE2NP61088 152 aaKnown RBP5.45□□□□□ -1.54
HDAC3-206ENST00000471968 FGF12P61328 243 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 PAX2Q02962 417 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 MGAT2Q10469 447 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 NKPD1Q17RQ9 610 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 PARP6Q2NL67 630 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 PRICKLE4Q2TBC4 344 aa5.45□□□□□ -1.54
HDAC3-206ENST00000471968 MSS51Q4VC12 460 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms