RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 BMP7P18075 431 aa12.03□□□□□ -0.48
PDZRN3-205ENST00000466780 DDX6P26196 483 aaKnown RBP eCLIP12.03□□□□□ -0.48
PDZRN3-205ENST00000466780 GDNFP39905 211 aa12.03□□□□□ -0.48
PDZRN3-205ENST00000466780 SNRPNP63162 240 aaKnown RBP12.03□□□□□ -0.48
PDZRN3-205ENST00000466780 MAPK14Q16539 360 aa12.03□□□□□ -0.48
PDZRN3-205ENST00000466780 ZSWIM7Q19AV6 140 aa12.03□□□□□ -0.48
PDZRN3-205ENST00000466780 HNRNPA1L2Q32P51 320 aaKnown RBP12.03□□□□□ -0.48
PDZRN3-205ENST00000466780 FNDC3BQ53EP0 1204 aaKnown RBP12.03□□□□□ -0.48
PDZRN3-205ENST00000466780 SLC22A10Q63ZE4 541 aa12.03□□□□□ -0.48
PDZRN3-205ENST00000466780 FAAH2Q6GMR7 532 aa12.03□□□□□ -0.48
PDZRN3-205ENST00000466780 ASPGQ86U10 573 aa12.03□□□□□ -0.48
PDZRN3-205ENST00000466780 GPAT4Q86UL3 456 aa12.03□□□□□ -0.48
PDZRN3-205ENST00000466780 SFTPA1Q8IWL2 248 aa12.03□□□□□ -0.48
PDZRN3-205ENST00000466780 OR11G2Q8NGC1 345 aa12.03□□□□□ -0.48
PDZRN3-205ENST00000466780 SMIM4Q8WVI0 70 aa12.03□□□□□ -0.48
PDZRN3-205ENST00000466780 TMEM239Q8WW34 195 aa12.03□□□□□ -0.48
PDZRN3-205ENST00000466780 SMPDL3BQ92485 455 aa12.03□□□□□ -0.48
PDZRN3-205ENST00000466780 ARSGQ96EG1 525 aa12.03□□□□□ -0.48
PDZRN3-205ENST00000466780 ARPC5LQ9BPX5 153 aa12.03□□□□□ -0.48
PDZRN3-205ENST00000466780 IFT27Q9BW83 186 aa12.03□□□□□ -0.48
PDZRN3-205ENST00000466780 GSX2Q9BZM3 304 aa12.03□□□□□ -0.48
PDZRN3-205ENST00000466780 SPRTNQ9H040 489 aaPredicted RBP12.03□□□□□ -0.48
PDZRN3-205ENST00000466780 ZCCHC4Q9H5U6 513 aa12.03□□□□□ -0.48
PDZRN3-205ENST00000466780 KRCC1Q9NPI7 259 aaPredicted RBP12.03□□□□□ -0.48
PDZRN3-205ENST00000466780 ABRACLQ9P1F3 81 aa12.03□□□□□ -0.48
PDZRN3-205ENST00000466780 SCML1Q9UN30 329 aa12.03□□□□□ -0.48
PDZRN3-205ENST00000466780 FKBP7Q9Y680 259 aa12.03□□□□□ -0.48
PDZRN3-205ENST00000466780 SCN3AQ9NY46 2000 aa12.03□□□□□ -0.48
PDZRN3-205ENST00000466780 TRAV1-2A0A0B4J238 106 aa12.02□□□□□ -0.48
PDZRN3-205ENST00000466780 TRAPPC13A5PLN9 417 aa12.02□□□□□ -0.48
PDZRN3-205ENST00000466780 PEX14O75381 377 aa12.02□□□□□ -0.48
PDZRN3-205ENST00000466780 SAGP10523 405 aaPredicted RBP12.02□□□□□ -0.48
PDZRN3-205ENST00000466780 LCN1P31025 176 aa12.02□□□□□ -0.48
PDZRN3-205ENST00000466780 RAB28P51157 221 aa12.02□□□□□ -0.48
PDZRN3-205ENST00000466780 BLVRAP53004 296 aa12.02□□□□□ -0.48
PDZRN3-205ENST00000466780 HCCSP53701 268 aa12.02□□□□□ -0.48
PDZRN3-205ENST00000466780 ERVFC1P60507 584 aa12.02□□□□□ -0.48
PDZRN3-205ENST00000466780 RPL6Q02878 288 aaKnown RBP12.02□□□□□ -0.48
PDZRN3-205ENST00000466780 DYRK1AQ13627 763 aa12.02□□□□□ -0.48
PDZRN3-205ENST00000466780 SFRP4Q6FHJ7 346 aaPredicted RBP12.02□□□□□ -0.48
PDZRN3-205ENST00000466780 ADGRG3Q86Y34 549 aa12.02□□□□□ -0.48
PDZRN3-205ENST00000466780 CXorf40AQ8TE69 158 aa12.02□□□□□ -0.48
PDZRN3-205ENST00000466780 ING5Q8WYH8 240 aa12.02□□□□□ -0.48
PDZRN3-205ENST00000466780 GCDHQ92947 438 aaPredicted RBP12.02□□□□□ -0.48
PDZRN3-205ENST00000466780 DDOQ99489 341 aa12.02□□□□□ -0.48
PDZRN3-205ENST00000466780 MRPS30Q9NP92 439 aaKnown RBP12.02□□□□□ -0.48
PDZRN3-205ENST00000466780 LYARQ9NX58 379 aaKnown RBP12.02□□□□□ -0.48
PDZRN3-205ENST00000466780 OR6C2Q9NZP2 312 aa12.02□□□□□ -0.48
PDZRN3-205ENST00000466780 RPS6KB2Q9UBS0 482 aa12.02□□□□□ -0.48
PDZRN3-205ENST00000466780 PPIEQ9UNP9 301 aaKnown RBP12.02□□□□□ -0.48
PDZRN3-205ENST00000466780 ZNF780BQ9Y6R6 833 aa12.02□□□□□ -0.48
PDZRN3-205ENST00000466780 A0A1W2PPL8 197 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 FAM86C2PA6NEL3 165 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 M0R233 179 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 CRMP1Q14194 572 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 DUSP5Q16690 384 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 GARNL3Q5VVW2 1013 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 DGLUCYQ7Z3D6 616 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 CDH24Q86UP0 819 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 OR2T4Q8NH00 348 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 RBPMSQ93062 196 aaKnown RBP12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 C1QTNF6Q9BXI9 259 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 ACTR6Q9GZN1 396 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 SIGLEC7Q9Y286 467 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 AK6Q9Y3D8 172 aaKnown RBP12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 MAB21L2Q9Y586 359 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 DOCK9Q9BZ29 2069 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 CTDSPLO15194 276 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 ADH5P11766 374 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 NT5EP21589 574 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 NDUFS1P28331 727 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 PTGS2P35354 604 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 P2RY2P41231 377 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 VEGFBP49765 207 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 MNX1P50219 401 aaPredicted RBP12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 CAMK1Q14012 370 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 SUZ12Q15022 739 aaKnown RBP12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 OR1Q1Q15612 314 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 GPR68Q15743 365 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 TP53I3Q53FA7 332 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 CHMP1BQ7LBR1 199 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 KANSL1Q7Z3B3 1105 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 HDDC2Q7Z4H3 204 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 GRAMD2AQ8IUY3 354 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 FAM98AQ8NCA5 519 aaKnown RBP12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 LGALS14Q8TCE9 139 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 WFIKKN2Q8TEU8 576 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 OTUB2Q96DC9 234 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 C10orf90Q96M02 699 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 CCDC86Q9H6F5 360 aaKnown RBP12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 ZNF275Q9NSD4 429 aaPredicted RBP12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 SPATA2Q9UM82 520 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 SLC35A3Q9Y2D2 325 aa12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 PCDHGA9Q9Y5G4 932 aaKnown RBP12.02□□□□□ -0.49
PDZRN3-205ENST00000466780 TRAV27A0A087WT01 109 aa12.01□□□□□ -0.49
PDZRN3-205ENST00000466780 DUXAA6NLW8 204 aa12.01□□□□□ -0.49
PDZRN3-205ENST00000466780 KHNYNO15037 678 aaKnown RBP12.01□□□□□ -0.49
PDZRN3-205ENST00000466780 FLRT2O43155 660 aa12.01□□□□□ -0.49
PDZRN3-205ENST00000466780 ASGR2P07307 311 aa12.01□□□□□ -0.49
PDZRN3-205ENST00000466780 NAT1P18440 290 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms