RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 TUBAL3A6NHL2 446 aa18.19■□□□□ 0.5
GTF3A-202ENST00000419181 NR5A2O00482 541 aa18.19■□□□□ 0.5
GTF3A-202ENST00000419181 SMNDC1O75940 238 aaKnown RBP eCLIP18.19■□□□□ 0.5
GTF3A-202ENST00000419181 SYNGR4O95473 234 aa18.19■□□□□ 0.5
GTF3A-202ENST00000419181 TFPTP0C1Z6 253 aa18.19■□□□□ 0.5
GTF3A-202ENST00000419181 CARD18P57730 90 aa18.19■□□□□ 0.5
GTF3A-202ENST00000419181 SESN3P58005 492 aa18.19■□□□□ 0.5
GTF3A-202ENST00000419181 DSTNP60981 165 aa18.19■□□□□ 0.5
GTF3A-202ENST00000419181 SQLEQ14534 574 aa18.19■□□□□ 0.5
GTF3A-202ENST00000419181 ZNF239Q16600 458 aaKnown RBP18.19■□□□□ 0.5
GTF3A-202ENST00000419181 TMEM176BQ3YBM2 270 aaPredicted RBP18.19■□□□□ 0.5
GTF3A-202ENST00000419181 LRIF1Q5T3J3 769 aa18.19■□□□□ 0.5
GTF3A-202ENST00000419181 FAM214BQ7L5A3 538 aa18.19■□□□□ 0.5
GTF3A-202ENST00000419181 TMEM234Q8WY98 164 aa18.19■□□□□ 0.5
GTF3A-202ENST00000419181 GMPPAQ96IJ6 420 aaPredicted RBP18.19■□□□□ 0.5
GTF3A-202ENST00000419181 SIKE1Q9BRV8 207 aa18.19■□□□□ 0.5
GTF3A-202ENST00000419181 COQ10BQ9H8M1 238 aa18.19■□□□□ 0.5
GTF3A-202ENST00000419181 NPHS2Q9NP85 383 aa18.19■□□□□ 0.5
GTF3A-202ENST00000419181 ACER3Q9NUN7 267 aa18.19■□□□□ 0.5
GTF3A-202ENST00000419181 OTOGQ6ZRI0 2925 aa18.19■□□□□ 0.5
GTF3A-202ENST00000419181 ADAM11O75078 769 aa18.18■□□□□ 0.5
GTF3A-202ENST00000419181 SS18L1O75177 396 aaPredicted RBP18.18■□□□□ 0.5
GTF3A-202ENST00000419181 BCHEP06276 602 aa18.18■□□□□ 0.5
GTF3A-202ENST00000419181 CD8BP10966 210 aa18.18■□□□□ 0.5
GTF3A-202ENST00000419181 CPOXP36551 454 aa18.18■□□□□ 0.5
GTF3A-202ENST00000419181 PCYT1AP49585 367 aa18.18■□□□□ 0.5
GTF3A-202ENST00000419181 RGNQ15493 299 aa18.18■□□□□ 0.5
GTF3A-202ENST00000419181 AGKQ53H12 422 aa18.18■□□□□ 0.5
GTF3A-202ENST00000419181 C3orf33Q6P1S2 294 aa18.18■□□□□ 0.5
GTF3A-202ENST00000419181 MSRB3Q8IXL7 192 aa18.18■□□□□ 0.5
GTF3A-202ENST00000419181 ARFGAP2Q8N6H7 521 aa18.18■□□□□ 0.5
GTF3A-202ENST00000419181 ATP6V1C2Q8NEY4 427 aa18.18■□□□□ 0.5
GTF3A-202ENST00000419181 SLC38A5Q8WUX1 472 aa18.18■□□□□ 0.5
GTF3A-202ENST00000419181 WDR60Q8WVS4 1066 aa18.18■□□□□ 0.5
GTF3A-202ENST00000419181 CNOT9Q92600 299 aaKnown RBP18.18■□□□□ 0.5
GTF3A-202ENST00000419181 CPNE4Q96A23 557 aaPredicted RBP18.18■□□□□ 0.5
GTF3A-202ENST00000419181 SRXN1Q9BYN0 137 aa18.18■□□□□ 0.5
GTF3A-202ENST00000419181 OPN3Q9H1Y3 402 aaPredicted RBP18.18■□□□□ 0.5
GTF3A-202ENST00000419181 TIGARQ9NQ88 270 aa18.18■□□□□ 0.5
GTF3A-202ENST00000419181 THUMPD1Q9NXG2 353 aaKnown RBP18.18■□□□□ 0.5
GTF3A-202ENST00000419181 DNAJB12Q9NXW2 375 aaKnown RBP18.18■□□□□ 0.5
GTF3A-202ENST00000419181 SLC25A37Q9NYZ2 338 aa18.18■□□□□ 0.5
GTF3A-202ENST00000419181 DCTN4Q9UJW0 460 aa18.18■□□□□ 0.5
GTF3A-202ENST00000419181 HRNRQ86YZ3 2850 aaPredicted RBP18.17■□□□□ 0.5
GTF3A-202ENST00000419181 FAM221AA4D161 298 aa18.17■□□□□ 0.5
GTF3A-202ENST00000419181 CLIC1O00299 241 aa18.17■□□□□ 0.5
GTF3A-202ENST00000419181 CTAG2O75638 210 aa18.17■□□□□ 0.5
GTF3A-202ENST00000419181 DBIP07108 87 aaKnown RBP18.17■□□□□ 0.5
GTF3A-202ENST00000419181 CD1EP15812 388 aa18.17■□□□□ 0.5
GTF3A-202ENST00000419181 IL7RP16871 459 aa18.17■□□□□ 0.5
GTF3A-202ENST00000419181 RYKP34925 604 aa18.17■□□□□ 0.5
GTF3A-202ENST00000419181 CRISP3P54108 245 aa18.17■□□□□ 0.5
GTF3A-202ENST00000419181 MERTKQ12866 999 aa18.17■□□□□ 0.5
GTF3A-202ENST00000419181 FADDQ13158 208 aa18.17■□□□□ 0.5
GTF3A-202ENST00000419181 PAGE3Q5JUK9 113 aa18.17■□□□□ 0.5
GTF3A-202ENST00000419181 ZNF474Q6S9Z5 364 aaPredicted RBP18.17■□□□□ 0.5
GTF3A-202ENST00000419181 PLEKHM3Q6ZWE6 761 aa18.17■□□□□ 0.5
GTF3A-202ENST00000419181 TMEM200AQ86VY9 491 aa18.17■□□□□ 0.5
GTF3A-202ENST00000419181 LINC01560Q8TB33 94 aa18.17■□□□□ 0.5
GTF3A-202ENST00000419181 RNF128Q8TEB7 428 aa18.17■□□□□ 0.5
GTF3A-202ENST00000419181 CCDC106Q9BWC9 280 aa18.17■□□□□ 0.5
GTF3A-202ENST00000419181 RAD21L1Q9H4I0 556 aa18.17■□□□□ 0.5
GTF3A-202ENST00000419181 RABEP2Q9H5N1 569 aa18.17■□□□□ 0.5
GTF3A-202ENST00000419181 ZNF385DQ9H6B1 395 aa18.17■□□□□ 0.5
GTF3A-202ENST00000419181 GLRX2Q9NS18 164 aa18.17■□□□□ 0.5
GTF3A-202ENST00000419181 CALML5Q9NZT1 146 aa18.17■□□□□ 0.5
GTF3A-202ENST00000419181 SLAMF8Q9P0V8 285 aa18.17■□□□□ 0.5
GTF3A-202ENST00000419181 CLEC4AQ9UMR7 237 aa18.17■□□□□ 0.5
GTF3A-202ENST00000419181 EMC9Q9Y3B6 208 aa18.17■□□□□ 0.5
GTF3A-202ENST00000419181 PLGP00747 810 aaPredicted RBP18.16■□□□□ 0.5
GTF3A-202ENST00000419181 EPXP11678 715 aa18.16■□□□□ 0.5
GTF3A-202ENST00000419181 BMP2P12643 396 aa18.16■□□□□ 0.5
GTF3A-202ENST00000419181 NCF2P19878 526 aaPredicted RBP18.16■□□□□ 0.5
GTF3A-202ENST00000419181 SLC7A1P30825 629 aa18.16■□□□□ 0.5
GTF3A-202ENST00000419181 GNA13Q14344 377 aa18.16■□□□□ 0.5
GTF3A-202ENST00000419181 DAZAP2Q15038 168 aaPredicted RBP18.16■□□□□ 0.5
GTF3A-202ENST00000419181 MRPL2Q5T653 305 aaKnown RBP18.16■□□□□ 0.5
GTF3A-202ENST00000419181 PEX5LQ8IYB4 626 aa18.16■□□□□ 0.5
GTF3A-202ENST00000419181 OR6K3Q8NGY3 331 aa18.16■□□□□ 0.5
GTF3A-202ENST00000419181 ZNF563Q8TA94 476 aa18.16■□□□□ 0.5
GTF3A-202ENST00000419181 ROBO4Q8WZ75 1007 aa18.16■□□□□ 0.5
GTF3A-202ENST00000419181 TMEM19Q96HH6 336 aa18.16■□□□□ 0.5
GTF3A-202ENST00000419181 PROCRQ9UNN8 238 aa18.16■□□□□ 0.5
GTF3A-202ENST00000419181 GMEB1Q9Y692 573 aa18.16■□□□□ 0.5
GTF3A-202ENST00000419181 TRBV5-3A0A0A0MS03 114 aa18.15■□□□□ 0.5
GTF3A-202ENST00000419181 A0A0G2JND7 137 aa18.15■□□□□ 0.5
GTF3A-202ENST00000419181 A0A1W2PP18 115 aa18.15■□□□□ 0.5
GTF3A-202ENST00000419181 A6NNC1 897 aa18.15■□□□□ 0.5
GTF3A-202ENST00000419181 NUDT7P0C024 238 aa18.15■□□□□ 0.5
GTF3A-202ENST00000419181 PABPC4LP0CB38 370 aaKnown RBP18.15■□□□□ 0.5
GTF3A-202ENST00000419181 CD79BP40259 229 aa18.15■□□□□ 0.5
GTF3A-202ENST00000419181 APOBEC1P41238 236 aaKnown RBP18.15■□□□□ 0.5
GTF3A-202ENST00000419181 CTBP2P56545 445 aa18.15■□□□□ 0.5
GTF3A-202ENST00000419181 RPS26P11Q5JNZ5 115 aaPredicted RBP18.15■□□□□ 0.5
GTF3A-202ENST00000419181 GRINAQ7Z429 371 aa18.15■□□□□ 0.5
GTF3A-202ENST00000419181 ZNF610Q8N9Z0 462 aa18.15■□□□□ 0.5
GTF3A-202ENST00000419181 ABHD3Q8WU67 409 aa18.15■□□□□ 0.5
GTF3A-202ENST00000419181 SLC25A43Q8WUT9 341 aaPredicted RBP18.15■□□□□ 0.5
GTF3A-202ENST00000419181 REXO5Q96IC2 774 aaKnown RBP18.15■□□□□ 0.5
GTF3A-202ENST00000419181 A4GALTQ9NPC4 353 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms