RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 A0A0A6YYJ9 748 aa13.93□□□□□ -0.18
DDX55-202ENST00000354291 IGHV3-15A0A0B4J1V0 119 aa13.93□□□□□ -0.18
DDX55-202ENST00000354291 LOC390937A0A1W2PQ73 354 aa13.93□□□□□ -0.18
DDX55-202ENST00000354291 TMEM89A2RUT3 159 aa13.93□□□□□ -0.18
DDX55-202ENST00000354291 OR5H1A6NKK0 313 aa13.93□□□□□ -0.18
DDX55-202ENST00000354291 SLCO1B7G3V0H7 640 aa13.93□□□□□ -0.18
DDX55-202ENST00000354291 SMAD9O15198 467 aaKnown RBP13.93□□□□□ -0.18
DDX55-202ENST00000354291 NPHS1O60500 1241 aa13.93□□□□□ -0.18
DDX55-202ENST00000354291 NUDT17P0C025 328 aa13.93□□□□□ -0.18
DDX55-202ENST00000354291 DDX5P17844 614 aaKnown RBP13.93□□□□□ -0.18
DDX55-202ENST00000354291 GABRA3P34903 492 aa13.93□□□□□ -0.18
DDX55-202ENST00000354291 ASMTP46597 345 aa13.93□□□□□ -0.18
DDX55-202ENST00000354291 OR3A2P47893 321 aa13.93□□□□□ -0.18
DDX55-202ENST00000354291 MANFP55145 182 aaKnown RBP13.93□□□□□ -0.18
DDX55-202ENST00000354291 HSPB3Q12988 150 aa13.93□□□□□ -0.18
DDX55-202ENST00000354291 PLPPR5Q32ZL2 321 aa13.93□□□□□ -0.18
DDX55-202ENST00000354291 RFTN2Q52LD8 501 aaPredicted RBP13.93□□□□□ -0.18
DDX55-202ENST00000354291 KANK2Q63ZY3 851 aa13.93□□□□□ -0.18
DDX55-202ENST00000354291 RINLQ6ZS11 566 aa13.93□□□□□ -0.18
DDX55-202ENST00000354291 SSX8Q7RTT4 187 aa13.93□□□□□ -0.18
DDX55-202ENST00000354291 TRABD2AQ86V40 505 aa13.93□□□□□ -0.18
DDX55-202ENST00000354291 ATP6V1C2Q8NEY4 427 aa13.93□□□□□ -0.18
DDX55-202ENST00000354291 OR2T11Q8NH01 316 aa13.93□□□□□ -0.18
DDX55-202ENST00000354291 POC1BQ8TC44 478 aa13.93□□□□□ -0.18
DDX55-202ENST00000354291 FBXO17Q96EF6 278 aa13.93□□□□□ -0.18
DDX55-202ENST00000354291 SH3YL1Q96HL8 342 aaPredicted RBP13.93□□□□□ -0.18
DDX55-202ENST00000354291 ROPN1BQ9BZX4 212 aaPredicted RBP13.93□□□□□ -0.18
DDX55-202ENST00000354291 TUBB1Q9H4B7 451 aa13.93□□□□□ -0.18
DDX55-202ENST00000354291 METTL17Q9H7H0 456 aaPredicted RBP13.93□□□□□ -0.18
DDX55-202ENST00000354291 ANKZF1Q9H8Y5 726 aa13.93□□□□□ -0.18
DDX55-202ENST00000354291 ROPN1Q9HAT0 212 aaPredicted RBP13.93□□□□□ -0.18
DDX55-202ENST00000354291 GP6Q9HCN6 339 aa13.93□□□□□ -0.18
DDX55-202ENST00000354291 ACSS1Q9NUB1 689 aaPredicted RBP13.93□□□□□ -0.18
DDX55-202ENST00000354291 SH3BP4Q9P0V3 963 aa13.93□□□□□ -0.18
DDX55-202ENST00000354291 TRAF6Q9Y4K3 522 aa13.93□□□□□ -0.18
DDX55-202ENST00000354291 NPIPA5A0A0B4J1W7 369 aa13.92□□□□□ -0.18
DDX55-202ENST00000354291 A0A0G2JK05 382 aa13.92□□□□□ -0.18
DDX55-202ENST00000354291 CIB4A0PJX0 185 aa13.92□□□□□ -0.18
DDX55-202ENST00000354291 NPIPA7E9PJI5 369 aa13.92□□□□□ -0.18
DDX55-202ENST00000354291 LSM1O15116 133 aaKnown RBP13.92□□□□□ -0.18
DDX55-202ENST00000354291 AKAP10O43572 662 aa13.92□□□□□ -0.18
DDX55-202ENST00000354291 PGM3O95394 542 aa13.92□□□□□ -0.18
DDX55-202ENST00000354291 NPIPA8P0DM63 369 aa13.92□□□□□ -0.18
DDX55-202ENST00000354291 SDC1P18827 310 aa13.92□□□□□ -0.18
DDX55-202ENST00000354291 ENPP1P22413 925 aa13.92□□□□□ -0.18
DDX55-202ENST00000354291 EDNRAP25101 427 aa13.92□□□□□ -0.18
DDX55-202ENST00000354291 ALDH3A1P30838 453 aa13.92□□□□□ -0.18
DDX55-202ENST00000354291 APOBEC3AP31941 199 aaPredicted RBP13.92□□□□□ -0.18
DDX55-202ENST00000354291 FRKP42685 505 aaPredicted RBP13.92□□□□□ -0.18
DDX55-202ENST00000354291 RPL38P63173 70 aaKnown RBP13.92□□□□□ -0.18
DDX55-202ENST00000354291 IFFO1Q0D2I5 559 aa13.92□□□□□ -0.18
DDX55-202ENST00000354291 TMEM176BQ3YBM2 270 aaPredicted RBP13.92□□□□□ -0.18
DDX55-202ENST00000354291 ARL13AQ5H913 290 aaPredicted RBP13.92□□□□□ -0.18
DDX55-202ENST00000354291 ANKRD26P1Q6NSI1 321 aa13.92□□□□□ -0.18
DDX55-202ENST00000354291 LRIG3Q6UXM1 1119 aa13.92□□□□□ -0.18
DDX55-202ENST00000354291 R3HCC1LQ7Z5L2 792 aaKnown RBP13.92□□□□□ -0.18
DDX55-202ENST00000354291 DDIASQ8IXT1 998 aa13.92□□□□□ -0.18
DDX55-202ENST00000354291 CDRT4Q8N9R6 151 aa13.92□□□□□ -0.18
DDX55-202ENST00000354291 ZNF540Q8NDQ6 660 aa13.92□□□□□ -0.18
DDX55-202ENST00000354291 SEMA6DQ8NFY4 1073 aa13.92□□□□□ -0.18
DDX55-202ENST00000354291 GPR151Q8TDV0 419 aa13.92□□□□□ -0.18
DDX55-202ENST00000354291 CIDECQ96AQ7 238 aaPredicted RBP13.92□□□□□ -0.18
DDX55-202ENST00000354291 MTERF3Q96E29 417 aa13.92□□□□□ -0.18
DDX55-202ENST00000354291 TSSK3Q96PN8 268 aa13.92□□□□□ -0.18
DDX55-202ENST00000354291 SORCS2Q96PQ0 1159 aa13.92□□□□□ -0.18
DDX55-202ENST00000354291 VRK1Q99986 396 aaPredicted RBP13.92□□□□□ -0.18
DDX55-202ENST00000354291 BPESC1Q9GZL8 116 aa13.92□□□□□ -0.18
DDX55-202ENST00000354291 HEATR1Q9H583 2144 aaKnown RBP13.92□□□□□ -0.18
DDX55-202ENST00000354291 CXorf36Q9H7Y0 433 aa13.92□□□□□ -0.18
DDX55-202ENST00000354291 EQTNQ9NQ60 294 aa13.92□□□□□ -0.18
DDX55-202ENST00000354291 NTMQ9P121 344 aa13.92□□□□□ -0.18
DDX55-202ENST00000354291 BAIAP2L1Q9UHR4 511 aa13.92□□□□□ -0.18
DDX55-202ENST00000354291 GXYLT2A0PJZ3 443 aa13.91□□□□□ -0.18
DDX55-202ENST00000354291 C7orf72A4D263 438 aa13.91□□□□□ -0.18
DDX55-202ENST00000354291 CCT8L1PA6NM43 557 aa13.91□□□□□ -0.18
DDX55-202ENST00000354291 TMEM114B3SHH9 223 aa13.91□□□□□ -0.18
DDX55-202ENST00000354291 RAD51DO75771 328 aa13.91□□□□□ -0.18
DDX55-202ENST00000354291 NKX2-2O95096 273 aa13.91□□□□□ -0.18
DDX55-202ENST00000354291 IGKV1D-16P01601 117 aa13.91□□□□□ -0.18
DDX55-202ENST00000354291 MAPK1P28482 360 aa13.91□□□□□ -0.18
DDX55-202ENST00000354291 SERPINB5P36952 375 aa13.91□□□□□ -0.18
DDX55-202ENST00000354291 PRKAG1P54619 331 aa13.91□□□□□ -0.18
DDX55-202ENST00000354291 PDE7AQ13946 482 aa13.91□□□□□ -0.18
DDX55-202ENST00000354291 UGT3A2Q3SY77 523 aa13.91□□□□□ -0.18
DDX55-202ENST00000354291 GALNTL6Q49A17 601 aa13.91□□□□□ -0.18
DDX55-202ENST00000354291 ZNF100Q8IYN0 542 aa13.91□□□□□ -0.18
DDX55-202ENST00000354291 SLC43A2Q8N370 569 aa13.91□□□□□ -0.18
DDX55-202ENST00000354291 ZNF433Q8N7K0 673 aaPredicted RBP13.91□□□□□ -0.18
DDX55-202ENST00000354291 ANKS4BQ8N8V4 417 aa13.91□□□□□ -0.18
DDX55-202ENST00000354291 LINC01356Q8N9X3 169 aa13.91□□□□□ -0.18
DDX55-202ENST00000354291 NUP43Q8NFH3 380 aa13.91□□□□□ -0.18
DDX55-202ENST00000354291 TWIST2Q8WVJ9 160 aa13.91□□□□□ -0.18
DDX55-202ENST00000354291 HOXB13Q92826 284 aaPredicted RBP13.91□□□□□ -0.18
DDX55-202ENST00000354291 PPP3R2Q96LZ3 170 aa13.91□□□□□ -0.18
DDX55-202ENST00000354291 KLHDC3Q9BQ90 382 aa13.91□□□□□ -0.18
DDX55-202ENST00000354291 LGALS13Q9UHV8 139 aa13.91□□□□□ -0.18
DDX55-202ENST00000354291 SERINC4A6NH21 518 aa13.9□□□□□ -0.18
DDX55-202ENST00000354291 FAM157AC9JC47 383 aa13.9□□□□□ -0.18
DDX55-202ENST00000354291 IGHV3-9P01782 118 aa13.9□□□□□ -0.18
DDX55-202ENST00000354291 CHRNGP07510 517 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms