RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 TNFRSF4P43489 277 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 EMP2P54851 167 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 PER3P56645 1201 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 TMEM52BQ4KMG9 183 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 AWAT2Q6E213 333 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 HAGHLQ6PII5 290 aaPredicted RBP15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 MBOAT2Q6ZWT7 520 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 RAB40AQ8WXH6 277 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 CA14Q9ULX7 337 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 DOCK2Q92608 1830 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 ADAMTS7Q9UKP4 1686 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 BCORQ6W2J9 1755 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 GFRA2O00451 464 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 APOC3P02656 99 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 PCSK6P29122 969 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 EIF2B1Q14232 305 aaKnown RBP15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 TATDN3Q17R31 274 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 CCSMST1Q4G0I0 132 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 EEF1A1P5Q5VTE0 462 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 CCSAPQ6IQ19 270 aaPredicted RBP15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 KIAA1211LQ6NV74 962 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 TBPL2Q6SJ96 375 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 RSPO2Q6UXX9 243 aaPredicted RBP15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 SLC35F3Q8IY50 421 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 OR9A4Q8NGU2 314 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 OR5H2Q8NGV7 314 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 ELMOD3Q96FG2 381 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 NIPSNAP1Q9BPW8 284 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 STARD5Q9NSY2 213 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 SIDT1Q9NXL6 827 aaKnown RBP15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 ARSKQ6UWY0 536 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 NRARPQ7Z6K4 114 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 MFSD8Q8NHS3 518 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 RNF215Q9Y6U7 377 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 EEF1E1-BLOC1S5C9J1V9 151 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 AKR1C4P17516 323 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 THBS2P35442 1172 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 HTR3AP46098 478 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 SLC6A12P48065 614 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 NXNL2Q5VZ03 156 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 FAM205BPQ63HN1 556 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 PXKQ7Z7A4 578 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 CENPOQ9BU64 300 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 SLC25A18Q9H1K4 315 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 SPATA6Q9NWH7 488 aaPredicted RBP15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 PPT2Q9UMR5 302 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 GLI3P10071 1580 aa15.96■□□□□ 0.15
TRAPPC11-201ENST00000334690 ARAP2Q8WZ64 1704 aa15.96■□□□□ 0.14
TRAPPC11-201ENST00000334690 GJE1A6NN92 205 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 CSNK1G2P78368 415 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 SLC35A2P78381 396 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 ABHD17CQ6PCB6 329 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 ZFP57Q9NU63 452 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 GLS2Q9UI32 602 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 TVP23AA6NH52 213 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 ZNF736B4DX44 427 aaPredicted RBP15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 SBK3P0C264 359 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 DLX5P56178 289 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 RAB38P57729 211 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 Q6ZNX1 250 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 LAS2Q8IYD9 372 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 PRR22Q8IZ63 422 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 NLGN4XQ8N0W4 816 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 PHB2Q99623 299 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 ZNF442Q9H7R0 627 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 APMAPQ9HDC9 416 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 TAAR2Q9P1P5 351 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 KIAA1551Q9HCM1 1747 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 TOGARAM1Q9Y4F4 1720 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 TMEM225BP0DP42 221 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 S100A2P29034 98 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 LSSP48449 732 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 RPS15P62841 145 aaKnown RBP15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 MALLQ13021 153 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 SLC48A1Q6P1K1 146 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 OR13C2Q8NGS9 318 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 SYT3Q9BQG1 590 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 SLC22A7Q9Y694 548 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 ZNF16P17020 682 aaPredicted RBP15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 AGAP7PQ5VUJ5 663 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 TMPPEQ6ZT21 453 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 OR6T1Q8NGN1 323 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 ZNF582Q96NG8 517 aaPredicted RBP15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 QRSL1Q9H0R6 528 aaKnown RBP15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 LMAN1LQ9HAT1 526 aa15.95■□□□□ 0.14
TRAPPC11-201ENST00000334690 H3BML4 177 aa15.94■□□□□ 0.14
TRAPPC11-201ENST00000334690 ARPC1BO15143 372 aaKnown RBP15.94■□□□□ 0.14
TRAPPC11-201ENST00000334690 AKAIN1P0CW23 69 aa15.94■□□□□ 0.14
TRAPPC11-201ENST00000334690 SELENOVP59797 346 aa15.94■□□□□ 0.14
TRAPPC11-201ENST00000334690 SYNPRQ8TBG9 265 aa15.94■□□□□ 0.14
TRAPPC11-201ENST00000334690 GON7Q9BXV9 100 aa15.94■□□□□ 0.14
TRAPPC11-201ENST00000334690 AMBRA1Q9C0C7 1298 aa15.94■□□□□ 0.14
TRAPPC11-201ENST00000334690 TXNL4BQ9NX01 149 aaKnown RBP15.94■□□□□ 0.14
TRAPPC11-201ENST00000334690 CXXC1Q9P0U4 656 aaPredicted RBP15.94■□□□□ 0.14
TRAPPC11-201ENST00000334690 THAP10Q9P2Z0 257 aaPredicted RBP15.94■□□□□ 0.14
TRAPPC11-201ENST00000334690 TNRC6CQ9HCJ0 1690 aaKnown RBP15.94■□□□□ 0.14
TRAPPC11-201ENST00000334690 LOC102723532A0A0G2JNH3 316 aa15.94■□□□□ 0.14
TRAPPC11-201ENST00000334690 ARPC5O15511 151 aa15.94■□□□□ 0.14
TRAPPC11-201ENST00000334690 PLATP00750 562 aa15.94■□□□□ 0.14
TRAPPC11-201ENST00000334690 OR2T7P0C7T2 308 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms