RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 AIG1Q9NVV5 245 aa15.81■□□□□ 0.12
HDDC3-201ENST00000330334 WDR45Q9Y484 360 aa15.81■□□□□ 0.12
HDDC3-201ENST00000330334 TMEM120BA0PK00 339 aa15.8■□□□□ 0.12
HDDC3-201ENST00000330334 ARHGEF9O43307 516 aa15.8■□□□□ 0.12
HDDC3-201ENST00000330334 ALDOCP09972 364 aaKnown RBP15.8■□□□□ 0.12
HDDC3-201ENST00000330334 SLC7A1P30825 629 aa15.8■□□□□ 0.12
HDDC3-201ENST00000330334 KHKP50053 298 aa15.8■□□□□ 0.12
HDDC3-201ENST00000330334 NR1H2P55055 460 aa15.8■□□□□ 0.12
HDDC3-201ENST00000330334 SESN3P58005 492 aa15.8■□□□□ 0.12
HDDC3-201ENST00000330334 NKX6-1P78426 367 aaPredicted RBP15.8■□□□□ 0.12
HDDC3-201ENST00000330334 MAPK14Q16539 360 aa15.8■□□□□ 0.12
HDDC3-201ENST00000330334 C3orf33Q6P1S2 294 aa15.8■□□□□ 0.12
HDDC3-201ENST00000330334 TFAP2EQ6VUC0 442 aa15.8■□□□□ 0.12
HDDC3-201ENST00000330334 KRTAP1-3Q8IUG1 177 aa15.8■□□□□ 0.12
HDDC3-201ENST00000330334 TUSC5Q8IXB3 177 aa15.8■□□□□ 0.12
HDDC3-201ENST00000330334 GABRG1Q8N1C3 465 aa15.8■□□□□ 0.12
HDDC3-201ENST00000330334 ZNF619Q8N2I2 560 aa15.8■□□□□ 0.12
HDDC3-201ENST00000330334 TRIML2Q8N7C3 387 aa15.8■□□□□ 0.12
HDDC3-201ENST00000330334 GLB1L3Q8NCI6 653 aaPredicted RBP15.8■□□□□ 0.12
HDDC3-201ENST00000330334 WFDC11Q8NEX6 87 aa15.8■□□□□ 0.12
HDDC3-201ENST00000330334 STEAP2Q8NFT2 490 aa15.8■□□□□ 0.12
HDDC3-201ENST00000330334 RFWD2Q8NHY2 731 aa15.8■□□□□ 0.12
HDDC3-201ENST00000330334 PMM1Q92871 262 aa15.8■□□□□ 0.12
HDDC3-201ENST00000330334 ROPN1LQ96C74 230 aa15.8■□□□□ 0.12
HDDC3-201ENST00000330334 ZC3HAV1LQ96H79 300 aaKnown RBP15.8■□□□□ 0.12
HDDC3-201ENST00000330334 TEX37Q96LM6 180 aa15.8■□□□□ 0.12
HDDC3-201ENST00000330334 SLC35A5Q9BS91 424 aa15.8■□□□□ 0.12
HDDC3-201ENST00000330334 ACTR6Q9GZN1 396 aa15.8■□□□□ 0.12
HDDC3-201ENST00000330334 EXOSC3Q9NQT5 275 aaKnown RBP15.8■□□□□ 0.12
HDDC3-201ENST00000330334 KLHL9Q9P2J3 617 aa15.8■□□□□ 0.12
HDDC3-201ENST00000330334 MARCOQ9UEW3 520 aaPredicted RBP15.8■□□□□ 0.12
HDDC3-201ENST00000330334 LIPT1Q9Y234 373 aa15.8■□□□□ 0.12
HDDC3-201ENST00000330334 GPR45Q9Y5Y3 372 aa15.8■□□□□ 0.12
HDDC3-201ENST00000330334 CENPVL1A0A0U1RR11 272 aa15.79■□□□□ 0.12
HDDC3-201ENST00000330334 GCM2O75603 506 aaPredicted RBP15.79■□□□□ 0.12
HDDC3-201ENST00000330334 PGRP06401 933 aa15.79■□□□□ 0.12
HDDC3-201ENST00000330334 UBTFL6P0CB48 400 aaPredicted RBP15.79■□□□□ 0.12
HDDC3-201ENST00000330334 ENPP1P22413 925 aa15.79■□□□□ 0.12
HDDC3-201ENST00000330334 CHI3L1P36222 383 aaPredicted RBP15.79■□□□□ 0.12
HDDC3-201ENST00000330334 APOBEC1P41238 236 aaKnown RBP15.79■□□□□ 0.12
HDDC3-201ENST00000330334 MAGEA8P43361 318 aa15.79■□□□□ 0.12
HDDC3-201ENST00000330334 CCR4P51679 360 aa15.79■□□□□ 0.12
HDDC3-201ENST00000330334 UFM1P61960 85 aa15.79■□□□□ 0.12
HDDC3-201ENST00000330334 FUT5Q11128 374 aa15.79■□□□□ 0.12
HDDC3-201ENST00000330334 P2RY6Q15077 328 aa15.79■□□□□ 0.12
HDDC3-201ENST00000330334 KRTAP21-3Q3LHN1 58 aa15.79■□□□□ 0.12
HDDC3-201ENST00000330334 ATG16L1Q676U5 607 aa15.79■□□□□ 0.12
HDDC3-201ENST00000330334 TNFAIP8L2Q6P589 184 aaPredicted RBP15.79■□□□□ 0.12
HDDC3-201ENST00000330334 PRSS57Q6UWY2 283 aa15.79■□□□□ 0.12
HDDC3-201ENST00000330334 FRRS1Q6ZNA5 592 aa15.79■□□□□ 0.12
HDDC3-201ENST00000330334 ATP6V1C2Q8NEY4 427 aa15.79■□□□□ 0.12
HDDC3-201ENST00000330334 SLC25A43Q8WUT9 341 aaPredicted RBP15.79■□□□□ 0.12
HDDC3-201ENST00000330334 RAB8BQ92930 207 aa15.79■□□□□ 0.12
HDDC3-201ENST00000330334 TRNT1Q96Q11 434 aaKnown RBP15.79■□□□□ 0.12
HDDC3-201ENST00000330334 HS3ST6Q96QI5 342 aa15.79■□□□□ 0.12
HDDC3-201ENST00000330334 C12orf49Q9H741 205 aa15.79■□□□□ 0.12
HDDC3-201ENST00000330334 PRDM4Q9UKN5 801 aa15.79■□□□□ 0.12
HDDC3-201ENST00000330334 ROS1P08922 2347 aa15.79■□□□□ 0.12
HDDC3-201ENST00000330334 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.78■□□□□ 0.12
HDDC3-201ENST00000330334 CCDC154A6NI56 674 aa15.78■□□□□ 0.12
HDDC3-201ENST00000330334 ZNF724A8MTY0 619 aa15.78■□□□□ 0.12
HDDC3-201ENST00000330334 HMGN4O00479 90 aa15.78■□□□□ 0.12
HDDC3-201ENST00000330334 CYTIPO60759 359 aa15.78■□□□□ 0.12
HDDC3-201ENST00000330334 SMPD2O60906 423 aa15.78■□□□□ 0.12
HDDC3-201ENST00000330334 TMCC2O75069 709 aa15.78■□□□□ 0.12
HDDC3-201ENST00000330334 CYP7B1O75881 506 aa15.78■□□□□ 0.12
HDDC3-201ENST00000330334 CLK1P49759 484 aaKnown RBP15.78■□□□□ 0.12
HDDC3-201ENST00000330334 ANXA11P50995 505 aaKnown RBP15.78■□□□□ 0.12
HDDC3-201ENST00000330334 CASP9P55211 416 aa15.78■□□□□ 0.12
HDDC3-201ENST00000330334 KCNJ10P78508 379 aa15.78■□□□□ 0.12
HDDC3-201ENST00000330334 SFRP5Q5T4F7 317 aa15.78■□□□□ 0.12
HDDC3-201ENST00000330334 TMPPEQ6ZT21 453 aa15.78■□□□□ 0.12
HDDC3-201ENST00000330334 PLEKHM3Q6ZWE6 761 aa15.78■□□□□ 0.12
HDDC3-201ENST00000330334 NUFIP2Q7Z417 695 aaKnown RBP15.78■□□□□ 0.12
HDDC3-201ENST00000330334 CMIPQ8IY22 773 aa15.78■□□□□ 0.12
HDDC3-201ENST00000330334 ANKRD42Q8N9B4 389 aa15.78■□□□□ 0.12
HDDC3-201ENST00000330334 ZG16BQ96DA0 208 aa15.78■□□□□ 0.12
HDDC3-201ENST00000330334 OR52E6Q96RD3 313 aa15.78■□□□□ 0.12
HDDC3-201ENST00000330334 PANX1Q96RD7 426 aa15.78■□□□□ 0.12
HDDC3-201ENST00000330334 PSD2Q9BQI7 771 aa15.78■□□□□ 0.12
HDDC3-201ENST00000330334 TMEM204Q9BSN7 226 aa15.78■□□□□ 0.12
HDDC3-201ENST00000330334 CCDC106Q9BWC9 280 aa15.78■□□□□ 0.12
HDDC3-201ENST00000330334 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.78■□□□□ 0.12
HDDC3-201ENST00000330334 ING1Q9UK53 422 aaPredicted RBP15.78■□□□□ 0.12
HDDC3-201ENST00000330334 HEATR5AQ86XA9 2040 aa15.78■□□□□ 0.12
HDDC3-201ENST00000330334 ARID1AO14497 2285 aa15.78■□□□□ 0.12
HDDC3-201ENST00000330334 A0A1W2PNR3 127 aa15.77■□□□□ 0.12
HDDC3-201ENST00000330334 PRAMEF27A3QJZ7 478 aa15.77■□□□□ 0.12
HDDC3-201ENST00000330334 H6PDO95479 791 aa15.77■□□□□ 0.12
HDDC3-201ENST00000330334 CNOT4O95628 575 aaKnown RBP15.77■□□□□ 0.12
HDDC3-201ENST00000330334 IL6P05231 212 aa15.77■□□□□ 0.12
HDDC3-201ENST00000330334 EPHA3P29320 983 aa15.77■□□□□ 0.12
HDDC3-201ENST00000330334 IL12AP29459 219 aa15.77■□□□□ 0.12
HDDC3-201ENST00000330334 CSNK2A1P68400 391 aaPredicted RBP15.77■□□□□ 0.12
HDDC3-201ENST00000330334 MERTKQ12866 999 aa15.77■□□□□ 0.12
HDDC3-201ENST00000330334 PDK3Q15120 406 aa15.77■□□□□ 0.12
HDDC3-201ENST00000330334 OLIG3Q7RTU3 272 aa15.77■□□□□ 0.12
HDDC3-201ENST00000330334 RNF130Q86XS8 419 aa15.77■□□□□ 0.12
HDDC3-201ENST00000330334 IGFBPL1Q8WX77 278 aa15.77■□□□□ 0.12
HDDC3-201ENST00000330334 HSD17B8Q92506 261 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms