RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 KCTD12Q96CX2 325 aaKnown RBP7.47□□□□□ -1.21
GPC3-204ENST00000631057 BPIFA2Q96DR5 249 aa7.47□□□□□ -1.21
GPC3-204ENST00000631057 MRPL38Q96DV4 380 aaKnown RBP7.47□□□□□ -1.21
GPC3-204ENST00000631057 IFT27Q9BW83 186 aa7.47□□□□□ -1.21
GPC3-204ENST00000631057 RNF32Q9H0A6 362 aa7.47□□□□□ -1.21
GPC3-204ENST00000631057 MMP28Q9H239 520 aa7.47□□□□□ -1.21
GPC3-204ENST00000631057 TP63Q9H3D4 680 aaPredicted RBP7.47□□□□□ -1.21
GPC3-204ENST00000631057 MED20Q9H944 212 aa7.47□□□□□ -1.21
GPC3-204ENST00000631057 IL21RQ9HBE5 538 aa7.47□□□□□ -1.21
GPC3-204ENST00000631057 POT1Q9NUX5 634 aa7.47□□□□□ -1.21
GPC3-204ENST00000631057 CLDND1Q9NY35 253 aa7.47□□□□□ -1.21
GPC3-204ENST00000631057 MAT2BQ9NZL9 334 aa7.47□□□□□ -1.21
GPC3-204ENST00000631057 SLC35A3Q9Y2D2 325 aa7.47□□□□□ -1.21
GPC3-204ENST00000631057 RBMX2Q9Y388 322 aaKnown RBP7.47□□□□□ -1.21
GPC3-204ENST00000631057 N6AMT1Q9Y5N5 214 aa7.47□□□□□ -1.21
GPC3-204ENST00000631057 TMEM131Q92545 1883 aa7.47□□□□□ -1.21
GPC3-204ENST00000631057 NPIPA5A0A0B4J1W7 369 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 C2orf92A0A1B0GVN3 265 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 OR5K4A6NMS3 321 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 NPIPA7E9PJI5 369 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 SGK494L7N484 410 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 PEX12O00623 359 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 PLA2G10O15496 165 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 CHP2O43745 196 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 NCR1O76036 304 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 NKX2-2O95096 273 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 IFNGP01579 166 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 GUSBP08236 651 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 NPIPA8P0DM63 369 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 SAGP10523 405 aaPredicted RBP7.46□□□□□ -1.21
GPC3-204ENST00000631057 ZNF3P17036 446 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 HK1P19367 917 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 PTNP21246 168 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 DRD1P21728 446 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 APEX1P27695 318 aaKnown RBP7.46□□□□□ -1.21
GPC3-204ENST00000631057 HLA-DMAP28067 261 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 SSTR4P31391 388 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 KIR2DL3P43628 341 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 EPHA4P54764 986 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 RAB38P57729 211 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 RPS7P62081 194 aaKnown RBP7.46□□□□□ -1.21
GPC3-204ENST00000631057 ACTC1P68032 377 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 ACTA1P68133 377 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 MRPS15P82914 257 aaKnown RBP7.46□□□□□ -1.21
GPC3-204ENST00000631057 MRPS21P82921 87 aaKnown RBP7.46□□□□□ -1.21
GPC3-204ENST00000631057 FOXK2Q01167 660 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 IFITM2Q01629 132 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 MGAT2Q10469 447 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 HYAL1Q12794 435 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 POU4F2Q12837 409 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 ADAM15Q13444 863 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 GAS6Q14393 721 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 EXOSC7Q15024 291 aaKnown RBP7.46□□□□□ -1.21
GPC3-204ENST00000631057 SF3B4Q15427 424 aaKnown RBP eCLIP7.46□□□□□ -1.217e-8■■■□□ 15.2
GPC3-204ENST00000631057 SF3A2Q15428 464 aaKnown RBP7.46□□□□□ -1.21
GPC3-204ENST00000631057 ZSWIM7Q19AV6 140 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 KLHL12Q53G59 568 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 HBMQ6B0K9 141 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 PLET1Q6UQ28 207 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 TMEM91Q6ZNR0 172 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 GATAD2AQ86YP4 633 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 GRAMD2AQ8IUY3 354 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 CA13Q8N1Q1 262 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 SLC37A3Q8NCC5 494 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 OR10H4Q8NGA5 316 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 OR13C2Q8NGS9 318 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 OR4C6Q8NH72 309 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 HOXB13Q92826 284 aaPredicted RBP7.46□□□□□ -1.21
GPC3-204ENST00000631057 KISS1RQ969F8 398 aaPredicted RBP7.46□□□□□ -1.21
GPC3-204ENST00000631057 MRGPRX1Q96LB2 322 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 DCLRE1CQ96SD1 692 aaKnown RBP7.46□□□□□ -1.21
GPC3-204ENST00000631057 CCDC3Q9BQI4 270 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 TMEM43Q9BTV4 400 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 NDC1Q9BTX1 674 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 GSDMCQ9BYG8 508 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 PBX4Q9BYU1 374 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 TRIM2Q9C040 744 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 C12orf49Q9H741 205 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 ATP13A2Q9NQ11 1180 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 C20orf141Q9NUB4 165 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 RBFOX1Q9NWB1 397 aaKnown RBP7.46□□□□□ -1.21
GPC3-204ENST00000631057 FBXO34Q9NWN3 711 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 CPNE7Q9UBL6 633 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 KCNE5Q9UJ90 142 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 CDV3Q9UKY7 258 aaKnown RBP7.46□□□□□ -1.21
GPC3-204ENST00000631057 SIGLEC7Q9Y286 467 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 MRPS2Q9Y399 296 aaKnown RBP7.46□□□□□ -1.21
GPC3-204ENST00000631057 HS3ST3A1Q9Y663 406 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 LAMA3Q16787 3333 aa7.46□□□□□ -1.21
GPC3-204ENST00000631057 CACNA1IQ9P0X4 2223 aa7.46□□□□□ -1.22
GPC3-204ENST00000631057 KNL1Q8NG31 2342 aa7.46□□□□□ -1.22
GPC3-204ENST00000631057 A0A0B4J2E0 115 aa7.46□□□□□ -1.22
GPC3-204ENST00000631057 KIR2DS5A0A0G2JLQ3 304 aa7.46□□□□□ -1.22
GPC3-204ENST00000631057 A0A0G2JNG1 304 aa7.46□□□□□ -1.22
GPC3-204ENST00000631057 FAM240BA0A1B0GVZ2 78 aa7.46□□□□□ -1.22
GPC3-204ENST00000631057 A0A1B0GX12 115 aa7.46□□□□□ -1.22
GPC3-204ENST00000631057 GXYLT2A0PJZ3 443 aa7.46□□□□□ -1.22
GPC3-204ENST00000631057 FAM25AB3EWG3 89 aa7.46□□□□□ -1.22
GPC3-204ENST00000631057 FAM25CB3EWG5 89 aa7.46□□□□□ -1.22
GPC3-204ENST00000631057 FAM25GB3EWG6 89 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms