RNA–Protein interactions for RNA: ENST00000625664.2

USP8-219, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5 BASIC

Gene USP8, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-219ENST00000625664 CCR4P51679 360 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 SIRPAP78324 504 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 FOXF1Q12946 379 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 ARHGAP11BQ3KRB8 267 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 ATAD3BQ5T9A4 648 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 OR2A2Q6IF42 318 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 TMCO5AQ8N6Q1 288 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 METTL25Q8N6Q8 603 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 MIPOL1Q8TD10 442 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 ARSGQ96EG1 525 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 NEURL3Q96EH8 262 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 OR52E6Q96RD3 313 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 PANX1Q96RD7 426 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 RBM24Q9BX46 236 aaKnown RBP11.33□□□□□ -0.6
USP8-219ENST00000625664 STOML1Q9UBI4 398 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 TAGLN3Q9UI15 199 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 KCNE5Q9UJ90 142 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 ZNF175Q9Y473 711 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 C7orf72A4D263 438 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 CCDC154A6NI56 674 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 B2RBV5 119 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 SLC22A3O75751 556 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 SMNDC1O75940 238 aaKnown RBP eCLIP11.33□□□□□ -0.6
USP8-219ENST00000625664 AQP8O94778 261 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 IDO1P14902 403 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 CD1EP15812 388 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 CAPN3P20807 821 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 RASSF2P50749 326 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 FUT5Q11128 374 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 TOMM34Q15785 309 aaPredicted RBP11.33□□□□□ -0.6
USP8-219ENST00000625664 PDCD4Q53EL6 469 aaKnown RBP11.33□□□□□ -0.6
USP8-219ENST00000625664 HEPHL1Q6MZM0 1159 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 VWA1Q6PCB0 445 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 DNAJC14Q6Y2X3 702 aaPredicted RBP11.33□□□□□ -0.6
USP8-219ENST00000625664 ZNF621Q6ZSS3 439 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 HMGN2P46Q86SG4 172 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 RNF130Q86XS8 419 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 KIF18BQ86Y91 864 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 OR10D3Q8NH80 312 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 ROPN1LQ96C74 230 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 ZNF350Q9GZX5 532 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 GALNT8Q9NY28 637 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 ITGB1BP2Q9UKP3 347 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 PACSIN3Q9UKS6 424 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 ICAM5Q9UMF0 924 aa11.33□□□□□ -0.6
USP8-219ENST00000625664 HEATR5AQ86XA9 2040 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 A0A0J9YW62 118 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 SERINC4A6NH21 518 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 TUBAL3A6NHL2 446 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 ENO4A6NNW6 628 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 TNFSF11O14788 317 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 UBDO15205 165 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 GYG2O15488 501 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 ZNF264O43296 627 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 CXCL13O43927 109 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 UGT2B17O75795 530 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 AGR2O95994 175 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 UBL4AP11441 157 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 ME2P23368 584 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 SHC1P29353 583 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 SFTPDP35247 375 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 CPOXP36551 454 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 PEX19P40855 299 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 SLC6A8P48029 635 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 SUMO3P55854 103 aaPredicted RBP11.32□□□□□ -0.6
USP8-219ENST00000625664 RAC1P63000 192 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 ZNF141Q15928 474 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 CTU2Q2VPK5 515 aaKnown RBP11.32□□□□□ -0.6
USP8-219ENST00000625664 BTLAQ7Z6A9 289 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 CDH24Q86UP0 819 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 TRIML2Q8N7C3 387 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 POU5F2Q8N7G0 328 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 GLB1L3Q8NCI6 653 aaPredicted RBP11.32□□□□□ -0.6
USP8-219ENST00000625664 RBM15BQ8NDT2 890 aaKnown RBP11.32□□□□□ -0.6
USP8-219ENST00000625664 ATP6V1C2Q8NEY4 427 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 OR9I1Q8NGQ6 314 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 OR2V1Q8NHB1 315 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 LINC01560Q8TB33 94 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 PNPT1Q8TCS8 783 aaKnown RBP11.32□□□□□ -0.6
USP8-219ENST00000625664 GPR119Q8TDV5 335 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 STARD4Q96DR4 205 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 ADGRG7Q96K78 797 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 GPATCH1Q9BRR8 931 aaKnown RBP11.32□□□□□ -0.6
USP8-219ENST00000625664 PRRG4Q9BZD6 226 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 PIGMQ9H3S5 423 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 DENND2DQ9H6A0 471 aaPredicted RBP11.32□□□□□ -0.6
USP8-219ENST00000625664 RNF122Q9H9V4 155 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 NKX1-2Q9UD57 310 aaPredicted RBP11.32□□□□□ -0.6
USP8-219ENST00000625664 CLEC4AQ9UMR7 237 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 WDR45Q9Y484 360 aa11.32□□□□□ -0.6
USP8-219ENST00000625664 HRNRQ86YZ3 2850 aaPredicted RBP11.31□□□□□ -0.6
USP8-219ENST00000625664 PRAMEF27A3QJZ7 478 aa11.31□□□□□ -0.6
USP8-219ENST00000625664 A8MXE2 369 aa11.31□□□□□ -0.6
USP8-219ENST00000625664 RFXANKO14593 260 aa11.31□□□□□ -0.6
USP8-219ENST00000625664 KIAA0513O60268 411 aa11.31□□□□□ -0.6
USP8-219ENST00000625664 EIF4E2O60573 245 aaKnown RBP11.31□□□□□ -0.6
USP8-219ENST00000625664 CSTAP01040 98 aa11.31□□□□□ -0.6
USP8-219ENST00000625664 CRHP06850 196 aa11.31□□□□□ -0.6
USP8-219ENST00000625664 UBTFL6P0CB48 400 aaPredicted RBP11.31□□□□□ -0.6
USP8-219ENST00000625664 EIF1P41567 113 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms