RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 ZNF239Q16600 458 aaKnown RBP16.11■□□□□ 0.17
SRSF1-208ENST00000584773 TMEM176BQ3YBM2 270 aaPredicted RBP16.11■□□□□ 0.17
SRSF1-208ENST00000584773 PAMR1Q6UXH9 720 aa16.11■□□□□ 0.17
SRSF1-208ENST00000584773 SPATA19Q7Z5L4 167 aa16.11■□□□□ 0.17
SRSF1-208ENST00000584773 RNF130Q86XS8 419 aa16.11■□□□□ 0.17
SRSF1-208ENST00000584773 VPS37AQ8NEZ2 397 aa16.11■□□□□ 0.17
SRSF1-208ENST00000584773 OR5W2Q8NH69 310 aa16.11■□□□□ 0.17
SRSF1-208ENST00000584773 PNPT1Q8TCS8 783 aaKnown RBP16.11■□□□□ 0.17
SRSF1-208ENST00000584773 ABHD3Q8WU67 409 aa16.11■□□□□ 0.17
SRSF1-208ENST00000584773 ZG16BQ96DA0 208 aa16.11■□□□□ 0.17
SRSF1-208ENST00000584773 NEURL3Q96EH8 262 aa16.11■□□□□ 0.17
SRSF1-208ENST00000584773 ZC3HAV1LQ96H79 300 aaKnown RBP16.11■□□□□ 0.17
SRSF1-208ENST00000584773 GMPPAQ96IJ6 420 aaPredicted RBP16.11■□□□□ 0.17
SRSF1-208ENST00000584773 CCDC115Q96NT0 180 aa16.11■□□□□ 0.17
SRSF1-208ENST00000584773 THUMPD3Q9BV44 507 aaKnown RBP16.11■□□□□ 0.17
SRSF1-208ENST00000584773 C12orf49Q9H741 205 aa16.11■□□□□ 0.17
SRSF1-208ENST00000584773 FREM1Q5H8C1 2179 aa16.1■□□□□ 0.17
SRSF1-208ENST00000584773 IGHV3-15A0A0B4J1V0 119 aa16.1■□□□□ 0.17
SRSF1-208ENST00000584773 A0A1W2PNR3 127 aa16.1■□□□□ 0.17
SRSF1-208ENST00000584773 CLDN24A6NM45 220 aa16.1■□□□□ 0.17
SRSF1-208ENST00000584773 SOX30O94993 753 aa16.1■□□□□ 0.17
SRSF1-208ENST00000584773 AK1P00568 194 aa16.1■□□□□ 0.17
SRSF1-208ENST00000584773 CSTAP01040 98 aa16.1■□□□□ 0.17
SRSF1-208ENST00000584773 PGRP06401 933 aa16.1■□□□□ 0.17
SRSF1-208ENST00000584773 ELK4P28324 431 aa16.1■□□□□ 0.17
SRSF1-208ENST00000584773 EIF1P41567 113 aaKnown RBP16.1■□□□□ 0.17
SRSF1-208ENST00000584773 KHKP50053 298 aa16.1■□□□□ 0.17
SRSF1-208ENST00000584773 CTBP2P56545 445 aa16.1■□□□□ 0.17
SRSF1-208ENST00000584773 CARD18P57730 90 aa16.1■□□□□ 0.17
SRSF1-208ENST00000584773 PLAURQ03405 335 aa16.1■□□□□ 0.17
SRSF1-208ENST00000584773 DPY19L1Q2PZI1 675 aa16.1■□□□□ 0.17
SRSF1-208ENST00000584773 ATG16L1Q676U5 607 aa16.1■□□□□ 0.17
SRSF1-208ENST00000584773 DNAJC14Q6Y2X3 702 aaPredicted RBP16.1■□□□□ 0.17
SRSF1-208ENST00000584773 FRRS1Q6ZNA5 592 aa16.1■□□□□ 0.17
SRSF1-208ENST00000584773 TOR1AIP2Q8NFQ8 470 aa16.1■□□□□ 0.17
SRSF1-208ENST00000584773 OR6K3Q8NGY3 331 aa16.1■□□□□ 0.17
SRSF1-208ENST00000584773 NINJ1Q92982 152 aa16.1■□□□□ 0.17
SRSF1-208ENST00000584773 ROPN1LQ96C74 230 aa16.1■□□□□ 0.17
SRSF1-208ENST00000584773 OR52B2Q96RD2 323 aa16.1■□□□□ 0.17
SRSF1-208ENST00000584773 KLHL4Q9C0H6 718 aa16.1■□□□□ 0.17
SRSF1-208ENST00000584773 SLC6A13Q9NSD5 602 aa16.1■□□□□ 0.17
SRSF1-208ENST00000584773 EXD2Q9NVH0 621 aa16.1■□□□□ 0.17
SRSF1-208ENST00000584773 NDRG3Q9UGV2 375 aa16.1■□□□□ 0.17
SRSF1-208ENST00000584773 BTNL2Q9UIR0 455 aa16.1■□□□□ 0.17
SRSF1-208ENST00000584773 EMC9Q9Y3B6 208 aa16.1■□□□□ 0.17
SRSF1-208ENST00000584773 WDR45Q9Y484 360 aa16.1■□□□□ 0.17
SRSF1-208ENST00000584773 GPC6Q9Y625 555 aaPredicted RBP16.1■□□□□ 0.17
SRSF1-208ENST00000584773 ITPR3Q14573 2671 aa16.09■□□□□ 0.17
SRSF1-208ENST00000584773 UQCRHLA0A096LP55 91 aa16.09■□□□□ 0.17
SRSF1-208ENST00000584773 CCDC154A6NI56 674 aa16.09■□□□□ 0.17
SRSF1-208ENST00000584773 TRPC5OSA6NMA1 111 aa16.09■□□□□ 0.17
SRSF1-208ENST00000584773 DEFB108AA8MXU0 73 aa16.09■□□□□ 0.17
SRSF1-208ENST00000584773 HMGN4O00479 90 aa16.09■□□□□ 0.17
SRSF1-208ENST00000584773 EIF4E2O60573 245 aaKnown RBP16.09■□□□□ 0.17
SRSF1-208ENST00000584773 H6PDO95479 791 aa16.09■□□□□ 0.17
SRSF1-208ENST00000584773 AGTR1P30556 359 aa16.09■□□□□ 0.17
SRSF1-208ENST00000584773 SLC18A1P54219 525 aa16.09■□□□□ 0.17
SRSF1-208ENST00000584773 CHRNEQ04844 493 aa16.09■□□□□ 0.17
SRSF1-208ENST00000584773 CBFBQ13951 182 aa16.09■□□□□ 0.17
SRSF1-208ENST00000584773 SYPL1Q16563 259 aa16.09■□□□□ 0.17
SRSF1-208ENST00000584773 GPAT3Q53EU6 434 aa16.09■□□□□ 0.17
SRSF1-208ENST00000584773 COX20Q5RI15 118 aa16.09■□□□□ 0.17
SRSF1-208ENST00000584773 ATAD3BQ5T9A4 648 aa16.09■□□□□ 0.17
SRSF1-208ENST00000584773 ANKFN1Q8N957 763 aa16.09■□□□□ 0.17
SRSF1-208ENST00000584773 ZFP90Q8TF47 636 aa16.09■□□□□ 0.17
SRSF1-208ENST00000584773 MAELQ96JY0 434 aaKnown RBP16.09■□□□□ 0.17
SRSF1-208ENST00000584773 OR52E6Q96RD3 313 aa16.09■□□□□ 0.17
SRSF1-208ENST00000584773 PANX1Q96RD7 426 aa16.09■□□□□ 0.17
SRSF1-208ENST00000584773 MED18Q9BUE0 208 aa16.09■□□□□ 0.17
SRSF1-208ENST00000584773 LAT2Q9GZY6 243 aa16.09■□□□□ 0.17
SRSF1-208ENST00000584773 PAQR5Q9NXK6 330 aaPredicted RBP16.09■□□□□ 0.17
SRSF1-208ENST00000584773 ELOVL5Q9NYP7 299 aa16.09■□□□□ 0.17
SRSF1-208ENST00000584773 C16orf97H3BN30 126 aa16.08■□□□□ 0.16
SRSF1-208ENST00000584773 CASKO14936 926 aa16.08■□□□□ 0.16
SRSF1-208ENST00000584773 ATE1O95260 518 aa16.08■□□□□ 0.16
SRSF1-208ENST00000584773 CHRM4P08173 479 aa16.08■□□□□ 0.16
SRSF1-208ENST00000584773 CD1EP15812 388 aa16.08■□□□□ 0.16
SRSF1-208ENST00000584773 ENPP1P22413 925 aa16.08■□□□□ 0.16
SRSF1-208ENST00000584773 DNASE1P24855 282 aa16.08■□□□□ 0.16
SRSF1-208ENST00000584773 ADH6P28332 368 aa16.08■□□□□ 0.16
SRSF1-208ENST00000584773 PGM1P36871 562 aa16.08■□□□□ 0.16
SRSF1-208ENST00000584773 FGFBP1Q14512 234 aa16.08■□□□□ 0.16
SRSF1-208ENST00000584773 TIGD2Q4W5G0 525 aa16.08■□□□□ 0.16
SRSF1-208ENST00000584773 SLC25A53Q5H9E4 307 aa16.08■□□□□ 0.16
SRSF1-208ENST00000584773 PDSS1Q5T2R2 415 aa16.08■□□□□ 0.16
SRSF1-208ENST00000584773 ZNF621Q6ZSS3 439 aa16.08■□□□□ 0.16
SRSF1-208ENST00000584773 NUFIP2Q7Z417 695 aaKnown RBP16.08■□□□□ 0.16
SRSF1-208ENST00000584773 ZNF619Q8N2I2 560 aa16.08■□□□□ 0.16
SRSF1-208ENST00000584773 OR9I1Q8NGQ6 314 aa16.08■□□□□ 0.16
SRSF1-208ENST00000584773 RAB3IL1Q8TBN0 382 aa16.08■□□□□ 0.16
SRSF1-208ENST00000584773 RNF128Q8TEB7 428 aa16.08■□□□□ 0.16
SRSF1-208ENST00000584773 ZNF75CPQ92670 426 aaPredicted RBP16.08■□□□□ 0.16
SRSF1-208ENST00000584773 DNAJA3Q96EY1 480 aa16.08■□□□□ 0.16
SRSF1-208ENST00000584773 MRGPRX4Q96LA9 322 aa16.08■□□□□ 0.16
SRSF1-208ENST00000584773 HS3ST6Q96QI5 342 aa16.08■□□□□ 0.16
SRSF1-208ENST00000584773 FOXC2Q99958 501 aa16.08■□□□□ 0.16
SRSF1-208ENST00000584773 SLC39A3Q9BRY0 314 aa16.08■□□□□ 0.16
SRSF1-208ENST00000584773 CXXC4Q9H2H0 198 aa16.08■□□□□ 0.16
SRSF1-208ENST00000584773 PLSCR4Q9NRQ2 329 aa16.08■□□□□ 0.16
SRSF1-208ENST00000584773 ETV2O00321 342 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms