RNA–Protein interactions for RNA: ENST00000582240.5

PPP4R1-221, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-221ENST00000582240 PEX5LQ8IYB4 626 aa18.63■□□□□ 0.57
PPP4R1-221ENST00000582240 CLIP4Q8N3C7 705 aa18.63■□□□□ 0.57
PPP4R1-221ENST00000582240 FAM71CQ8NEG0 241 aa18.63■□□□□ 0.57
PPP4R1-221ENST00000582240 ASB5Q8WWX0 329 aa18.63■□□□□ 0.57
PPP4R1-221ENST00000582240 FIG4Q92562 907 aa18.63■□□□□ 0.57
PPP4R1-221ENST00000582240 PINK1Q9BXM7 581 aa18.63■□□□□ 0.57
PPP4R1-221ENST00000582240 RSPO3Q9BXY4 272 aaPredicted RBP18.63■□□□□ 0.57
PPP4R1-221ENST00000582240 PIF1Q9H611 641 aa18.63■□□□□ 0.57
PPP4R1-221ENST00000582240 CALHM2Q9HA72 323 aa18.63■□□□□ 0.57
PPP4R1-221ENST00000582240 DNAJB12Q9NXW2 375 aaKnown RBP18.63■□□□□ 0.57
PPP4R1-221ENST00000582240 CALML5Q9NZT1 146 aa18.63■□□□□ 0.57
PPP4R1-221ENST00000582240 NCOA6Q14686 2063 aaPredicted RBP18.62■□□□□ 0.57
PPP4R1-221ENST00000582240 UTP20O75691 2785 aaKnown RBP18.62■□□□□ 0.57
PPP4R1-221ENST00000582240 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.62■□□□□ 0.57
PPP4R1-221ENST00000582240 A0A0J9YW62 118 aa18.62■□□□□ 0.57
PPP4R1-221ENST00000582240 C7orf72A4D263 438 aa18.62■□□□□ 0.57
PPP4R1-221ENST00000582240 LINC01387J3KSC0 135 aa18.62■□□□□ 0.57
PPP4R1-221ENST00000582240 MRASO14807 208 aa18.62■□□□□ 0.57
PPP4R1-221ENST00000582240 PGM3O95394 542 aa18.62■□□□□ 0.57
PPP4R1-221ENST00000582240 GKN3PP0CG01 181 aa18.62■□□□□ 0.57
PPP4R1-221ENST00000582240 AGAP20933 346 aa18.62■□□□□ 0.57
PPP4R1-221ENST00000582240 CHRNB4P30926 498 aa18.62■□□□□ 0.57
PPP4R1-221ENST00000582240 CEACAM8P31997 349 aaPredicted RBP18.62■□□□□ 0.57
PPP4R1-221ENST00000582240 SFTPDP35247 375 aa18.62■□□□□ 0.57
PPP4R1-221ENST00000582240 SESN3P58005 492 aa18.62■□□□□ 0.57
PPP4R1-221ENST00000582240 CDK6Q00534 326 aa18.62■□□□□ 0.57
PPP4R1-221ENST00000582240 ADRM1Q16186 407 aa18.62■□□□□ 0.57
PPP4R1-221ENST00000582240 SP5Q6BEB4 398 aaPredicted RBP18.62■□□□□ 0.57
PPP4R1-221ENST00000582240 PPP4R4Q6NUP7 873 aa18.62■□□□□ 0.57
PPP4R1-221ENST00000582240 CHMP1BQ7LBR1 199 aa18.62■□□□□ 0.57
PPP4R1-221ENST00000582240 ADGRE4PQ86SQ3 457 aa18.62■□□□□ 0.57
PPP4R1-221ENST00000582240 TREML1Q86YW5 311 aa18.62■□□□□ 0.57
PPP4R1-221ENST00000582240 LILRB4Q8NHJ6 448 aa18.62■□□□□ 0.57
PPP4R1-221ENST00000582240 THUMPD1Q9NXG2 353 aaKnown RBP18.62■□□□□ 0.57
PPP4R1-221ENST00000582240 CLCF1Q9UBD9 225 aa18.62■□□□□ 0.57
PPP4R1-221ENST00000582240 ZNF443Q9Y2A4 671 aaPredicted RBP18.62■□□□□ 0.57
PPP4R1-221ENST00000582240 CHST2Q9Y4C5 530 aa18.62■□□□□ 0.57
PPP4R1-221ENST00000582240 DSPPQ9NZW4 1301 aa18.62■□□□□ 0.57
PPP4R1-221ENST00000582240 ICE1Q9Y2F5 2266 aa18.62■□□□□ 0.57
PPP4R1-221ENST00000582240 TNFSF11O14788 317 aa18.61■□□□□ 0.57
PPP4R1-221ENST00000582240 SNX3O60493 162 aa18.61■□□□□ 0.57
PPP4R1-221ENST00000582240 IL2RAP01589 272 aa18.61■□□□□ 0.57
PPP4R1-221ENST00000582240 NID1P14543 1247 aa18.61■□□□□ 0.57
PPP4R1-221ENST00000582240 PGCP20142 388 aa18.61■□□□□ 0.57
PPP4R1-221ENST00000582240 EIF1AXP47813 144 aaKnown RBP18.61■□□□□ 0.57
PPP4R1-221ENST00000582240 ZNF136P52737 540 aa18.61■□□□□ 0.57
PPP4R1-221ENST00000582240 RAC1P63000 192 aa18.61■□□□□ 0.57
PPP4R1-221ENST00000582240 FOXF2Q12947 444 aa18.61■□□□□ 0.57
PPP4R1-221ENST00000582240 CYLC2Q14093 348 aaPredicted RBP18.61■□□□□ 0.57
PPP4R1-221ENST00000582240 SCARB2Q14108 478 aa18.61■□□□□ 0.57
PPP4R1-221ENST00000582240 SF3B4Q15427 424 aaKnown RBP eCLIP18.61■□□□□ 0.576e-7■■■■■ 46.3
PPP4R1-221ENST00000582240 ZNF787Q6DD87 383 aa18.61■□□□□ 0.57
PPP4R1-221ENST00000582240 PTOV1Q86YD1 416 aa18.61■□□□□ 0.57
PPP4R1-221ENST00000582240 GRAMD2AQ8IUY3 354 aa18.61■□□□□ 0.57
PPP4R1-221ENST00000582240 LILRA2Q8N149 483 aa18.61■□□□□ 0.57
PPP4R1-221ENST00000582240 ZNF563Q8TA94 476 aa18.61■□□□□ 0.57
PPP4R1-221ENST00000582240 CCDC106Q9BWC9 280 aa18.61■□□□□ 0.57
PPP4R1-221ENST00000582240 NSRP1Q9H0G5 558 aaKnown RBP18.61■□□□□ 0.57
PPP4R1-221ENST00000582240 GPC6Q9Y625 555 aaPredicted RBP18.61■□□□□ 0.57
PPP4R1-221ENST00000582240 GMEB1Q9Y692 573 aa18.61■□□□□ 0.57
PPP4R1-221ENST00000582240 PCNX1Q96RV3 2341 aa18.61■□□□□ 0.57
PPP4R1-221ENST00000582240 HECTD1Q9ULT8 2610 aa18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 USP9YO00507 2555 aaPredicted RBP18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 DOPEY1Q5JWR5 2465 aa18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 MBD3L4A6NDZ8 208 aaPredicted RBP18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 MBD3L3A6NE82 208 aaPredicted RBP18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 MBD3L5A6NJ08 208 aaPredicted RBP18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 CYSRT1A8MQ03 144 aa18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 FRS3O43559 492 aa18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 CXCL13O43927 109 aa18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 CCDC22O60826 627 aa18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 DNAJA2O60884 412 aa18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 NTN1O95631 604 aa18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 COX4I1P13073 169 aa18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 AQP1P29972 269 aa18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 TIMP3P35625 211 aa18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 EIF1P41567 113 aaKnown RBP18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 IDH2P48735 452 aaKnown RBP18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 EEF1A1P68104 462 aaKnown RBP18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 MERTKQ12866 999 aa18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 GNA13Q14344 377 aa18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 MAPRE2Q15555 327 aa18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 SGCBQ16585 318 aa18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 CTU2Q2VPK5 515 aaKnown RBP18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 TRMT5Q32P41 509 aaKnown RBP18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 TMEM176BQ3YBM2 270 aaPredicted RBP18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 RABL3Q5HYI8 236 aa18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 NANOGP8Q6NSW7 305 aa18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 P4HA3Q7Z4N8 544 aa18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 GCNT2Q8N0V5 402 aa18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 OR10A6Q8NH74 314 aa18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 MBD3L2Q8NHZ7 208 aaPredicted RBP18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 BBS10Q8TAM1 723 aa18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 OIT3Q8WWZ8 545 aa18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 INTS12Q96CB8 462 aaKnown RBP18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 LRRC58Q96CX6 371 aa18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 RCN3Q96D15 328 aa18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 DNAJA3Q96EY1 480 aa18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 NANOGQ9H9S0 305 aa18.6■□□□□ 0.57
PPP4R1-221ENST00000582240 BCL2L10Q9HD36 194 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms