RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 TRIM63Q969Q1 353 aa21.52■■□□□ 1.04
FOXA1-202ENST00000545425 CREB3L1Q96BA8 519 aa21.52■■□□□ 1.04
FOXA1-202ENST00000545425 SHDQ96IW2 340 aa21.52■■□□□ 1.04
FOXA1-202ENST00000545425 TRIM2Q9C040 744 aa21.52■■□□□ 1.04
FOXA1-202ENST00000545425 POT1Q9NUX5 634 aa21.52■■□□□ 1.04
FOXA1-202ENST00000545425 SIGLEC7Q9Y286 467 aa21.52■■□□□ 1.04
FOXA1-202ENST00000545425 BLACEA4D250 179 aa21.52■■□□□ 1.04
FOXA1-202ENST00000545425 A8MU76 341 aa21.52■■□□□ 1.04
FOXA1-202ENST00000545425 SCO2O43819 266 aa21.52■■□□□ 1.04
FOXA1-202ENST00000545425 NKX2-2O95096 273 aa21.52■■□□□ 1.04
FOXA1-202ENST00000545425 CD1AP06126 327 aa21.52■■□□□ 1.04
FOXA1-202ENST00000545425 ALAS2P22557 587 aa21.52■■□□□ 1.04
FOXA1-202ENST00000545425 HNRNPA2B1P22626 353 aaKnown RBP21.52■■□□□ 1.04
FOXA1-202ENST00000545425 MAT2AP31153 395 aaKnown RBP21.52■■□□□ 1.04
FOXA1-202ENST00000545425 ATP12AP54707 1039 aa21.52■■□□□ 1.04
FOXA1-202ENST00000545425 ARHGAP11AQ6P4F7 1023 aa21.52■■□□□ 1.04
FOXA1-202ENST00000545425 OR5W2Q8NH69 310 aa21.52■■□□□ 1.04
FOXA1-202ENST00000545425 OR4C6Q8NH72 309 aa21.52■■□□□ 1.04
FOXA1-202ENST00000545425 LILRB4Q8NHJ6 448 aa21.52■■□□□ 1.04
FOXA1-202ENST00000545425 ZCCHC10Q8TBK6 192 aa21.52■■□□□ 1.04
FOXA1-202ENST00000545425 MRPL48Q96GC5 212 aaKnown RBP21.52■■□□□ 1.04
FOXA1-202ENST00000545425 RNF170Q96K19 258 aa21.52■■□□□ 1.04
FOXA1-202ENST00000545425 CA14Q9ULX7 337 aa21.52■■□□□ 1.04
FOXA1-202ENST00000545425 NOX1Q9Y5S8 564 aa21.52■■□□□ 1.04
FOXA1-202ENST00000545425 COL4A2P08572 1712 aa21.52■■□□□ 1.04
FOXA1-202ENST00000545425 SNRNP200O75643 2136 aaKnown RBP21.51■■□□□ 1.03
FOXA1-202ENST00000545425 P2RX6O15547 441 aa21.51■■□□□ 1.03
FOXA1-202ENST00000545425 CTSVO60911 334 aa21.51■■□□□ 1.03
FOXA1-202ENST00000545425 SLC2A10O95528 541 aa21.51■■□□□ 1.03
FOXA1-202ENST00000545425 HOXB2P14652 356 aa21.51■■□□□ 1.03
FOXA1-202ENST00000545425 MAKP20794 623 aa21.51■■□□□ 1.03
FOXA1-202ENST00000545425 SLC6A6P31641 620 aa21.51■■□□□ 1.03
FOXA1-202ENST00000545425 SEC13P55735 322 aa21.51■■□□□ 1.03
FOXA1-202ENST00000545425 PRICKLE4Q2TBC4 344 aa21.51■■□□□ 1.03
FOXA1-202ENST00000545425 C11orf74Q86VG3 221 aa21.51■■□□□ 1.03
FOXA1-202ENST00000545425 BAHD1Q8TBE0 780 aaPredicted RBP21.51■■□□□ 1.03
FOXA1-202ENST00000545425 KISS1RQ969F8 398 aaPredicted RBP21.51■■□□□ 1.03
FOXA1-202ENST00000545425 CTHRC1Q96CG8 243 aa21.51■■□□□ 1.03
FOXA1-202ENST00000545425 GON7Q9BXV9 100 aa21.51■■□□□ 1.03
FOXA1-202ENST00000545425 ADAP2Q9NPF8 381 aa21.51■■□□□ 1.03
FOXA1-202ENST00000545425 ING3Q9NXR8 418 aa21.51■■□□□ 1.03
FOXA1-202ENST00000545425 NPFFR2Q9Y5X5 522 aa21.51■■□□□ 1.03
FOXA1-202ENST00000545425 LINC00854A0A1B0GVQ3 168 aa21.5■■□□□ 1.03
FOXA1-202ENST00000545425 CD8B2A6NJW9 211 aa21.5■■□□□ 1.03
FOXA1-202ENST00000545425 OR5K4A6NMS3 321 aa21.5■■□□□ 1.03
FOXA1-202ENST00000545425 PTP4A3O75365 173 aa21.5■■□□□ 1.03
FOXA1-202ENST00000545425 CD8BP10966 210 aa21.5■■□□□ 1.03
FOXA1-202ENST00000545425 NT5EP21589 574 aa21.5■■□□□ 1.03
FOXA1-202ENST00000545425 FXYD6P3P58550 94 aa21.5■■□□□ 1.03
FOXA1-202ENST00000545425 MAPK14Q16539 360 aa21.5■■□□□ 1.03
FOXA1-202ENST00000545425 TRMT12Q53H54 448 aaKnown RBP21.5■■□□□ 1.03
FOXA1-202ENST00000545425 BAIAP2L2Q6UXY1 529 aa21.5■■□□□ 1.03
FOXA1-202ENST00000545425 RTL4Q6ZR62 310 aa21.5■■□□□ 1.03
FOXA1-202ENST00000545425 PLCZ1Q86YW0 608 aa21.5■■□□□ 1.03
FOXA1-202ENST00000545425 TRIM48Q8IWZ4 208 aa21.5■■□□□ 1.03
FOXA1-202ENST00000545425 SLC37A3Q8NCC5 494 aa21.5■■□□□ 1.03
FOXA1-202ENST00000545425 SIPA1Q96FS4 1042 aa21.5■■□□□ 1.03
FOXA1-202ENST00000545425 TEAD3Q99594 435 aa21.5■■□□□ 1.03
FOXA1-202ENST00000545425 IFT27Q9BW83 186 aa21.5■■□□□ 1.03
FOXA1-202ENST00000545425 MAT2BQ9NZL9 334 aa21.5■■□□□ 1.03
FOXA1-202ENST00000545425 POM121BA6NF01 834 aa21.5■■□□□ 1.03
FOXA1-202ENST00000545425 CYR61O00622 381 aa21.5■■□□□ 1.03
FOXA1-202ENST00000545425 EML2O95834 649 aa21.5■■□□□ 1.03
FOXA1-202ENST00000545425 SBK2P0C263 348 aa21.5■■□□□ 1.03
FOXA1-202ENST00000545425 PEPDP12955 493 aa21.5■■□□□ 1.03
FOXA1-202ENST00000545425 ACSL1P33121 698 aa21.5■■□□□ 1.03
FOXA1-202ENST00000545425 PSMD4P55036 377 aaKnown RBP21.5■■□□□ 1.03
FOXA1-202ENST00000545425 PPP2CBP62714 309 aa21.5■■□□□ 1.03
FOXA1-202ENST00000545425 PPP2CAP67775 309 aa21.5■■□□□ 1.03
FOXA1-202ENST00000545425 TATDN3Q17R31 274 aa21.5■■□□□ 1.03
FOXA1-202ENST00000545425 JPH3Q8WXH2 748 aaPredicted RBP21.5■■□□□ 1.03
FOXA1-202ENST00000545425 ZNF426Q9BUY5 554 aa21.5■■□□□ 1.03
FOXA1-202ENST00000545425 A0A0B4J2E0 115 aa21.49■■□□□ 1.03
FOXA1-202ENST00000545425 A0A0J9YY10 115 aa21.49■■□□□ 1.03
FOXA1-202ENST00000545425 A0A1B0GX12 115 aa21.49■■□□□ 1.03
FOXA1-202ENST00000545425 A0A1W2PQF6 199 aa21.49■■□□□ 1.03
FOXA1-202ENST00000545425 LRRC72A6NJI9 287 aa21.49■■□□□ 1.03
FOXA1-202ENST00000545425 TTC36A6NLP5 189 aa21.49■■□□□ 1.03
FOXA1-202ENST00000545425 H0YGG7 62 aa21.49■■□□□ 1.03
FOXA1-202ENST00000545425 SLC35E2P0CK97 266 aa21.49■■□□□ 1.03
FOXA1-202ENST00000545425 NPR2P20594 1047 aa21.49■■□□□ 1.03
FOXA1-202ENST00000545425 SLC2A5P22732 501 aa21.49■■□□□ 1.03
FOXA1-202ENST00000545425 AK4P27144 223 aaPredicted RBP21.49■■□□□ 1.03
FOXA1-202ENST00000545425 CAV3P56539 151 aa21.49■■□□□ 1.03
FOXA1-202ENST00000545425 NRG3P56975 720 aa21.49■■□□□ 1.03
FOXA1-202ENST00000545425 RAB38P57729 211 aa21.49■■□□□ 1.03
FOXA1-202ENST00000545425 ARF3P61204 181 aaPredicted RBP21.49■■□□□ 1.03
FOXA1-202ENST00000545425 PXKQ7Z7A4 578 aa21.49■■□□□ 1.03
FOXA1-202ENST00000545425 PHYHIPQ92561 330 aa21.49■■□□□ 1.03
FOXA1-202ENST00000545425 LMF2Q9BU23 707 aaKnown RBP21.49■■□□□ 1.03
FOXA1-202ENST00000545425 EXTL2Q9UBQ6 330 aa21.49■■□□□ 1.03
FOXA1-202ENST00000545425 NUFIP1Q9UHK0 495 aaKnown RBP21.49■■□□□ 1.03
FOXA1-202ENST00000545425 TRAV1-2A0A0B4J238 106 aa21.48■■□□□ 1.03
FOXA1-202ENST00000545425 GALR3O60755 368 aaPredicted RBP21.48■■□□□ 1.03
FOXA1-202ENST00000545425 PSKH1P11801 424 aa21.48■■□□□ 1.03
FOXA1-202ENST00000545425 TCEA1P23193 301 aaKnown RBP21.48■■□□□ 1.03
FOXA1-202ENST00000545425 SOX9P48436 509 aa21.48■■□□□ 1.03
FOXA1-202ENST00000545425 SRP54P61011 504 aaKnown RBP21.48■■□□□ 1.03
FOXA1-202ENST00000545425 RIPPLY1Q0D2K3 151 aa21.48■■□□□ 1.03
FOXA1-202ENST00000545425 MGAT2Q10469 447 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms