RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 DUSP26Q9BV47 211 aa10.57□□□□□ -0.72
GABPB1-206ENST00000543881 SRXN1Q9BYN0 137 aa10.57□□□□□ -0.72
GABPB1-206ENST00000543881 REG4Q9BYZ8 158 aa10.57□□□□□ -0.72
GABPB1-206ENST00000543881 YAE1D1Q9NRH1 226 aa10.57□□□□□ -0.72
GABPB1-206ENST00000543881 PAQR5Q9NXK6 330 aaPredicted RBP10.57□□□□□ -0.72
GABPB1-206ENST00000543881 KCNE5Q9UJ90 142 aa10.57□□□□□ -0.72
GABPB1-206ENST00000543881 FAF1Q9UNN5 650 aaPredicted RBP10.57□□□□□ -0.72
GABPB1-206ENST00000543881 CENPVL1A0A0U1RR11 272 aa10.56□□□□□ -0.72
GABPB1-206ENST00000543881 ESPNB1AK53 854 aa10.56□□□□□ -0.72
GABPB1-206ENST00000543881 ZNF195O14628 629 aa10.56□□□□□ -0.72
GABPB1-206ENST00000543881 HS3ST1O14792 307 aa10.56□□□□□ -0.72
GABPB1-206ENST00000543881 CFLARO15519 480 aa10.56□□□□□ -0.72
GABPB1-206ENST00000543881 TLX2O43763 284 aaPredicted RBP10.56□□□□□ -0.72
GABPB1-206ENST00000543881 NTN1O95631 604 aa10.56□□□□□ -0.72
GABPB1-206ENST00000543881 ME2P23368 584 aa10.56□□□□□ -0.72
GABPB1-206ENST00000543881 AGTR1P30556 359 aa10.56□□□□□ -0.72
GABPB1-206ENST00000543881 P2RX1P51575 399 aa10.56□□□□□ -0.72
GABPB1-206ENST00000543881 ATP12AP54707 1039 aa10.56□□□□□ -0.72
GABPB1-206ENST00000543881 CTBP2P56545 445 aa10.56□□□□□ -0.72
GABPB1-206ENST00000543881 CARD18P57730 90 aa10.56□□□□□ -0.72
GABPB1-206ENST00000543881 ZNF844Q08AG5 666 aa10.56□□□□□ -0.72
GABPB1-206ENST00000543881 PDCD2Q16342 344 aaPredicted RBP10.56□□□□□ -0.72
GABPB1-206ENST00000543881 ZNF239Q16600 458 aaKnown RBP10.56□□□□□ -0.72
GABPB1-206ENST00000543881 PGS1Q32NB8 556 aa10.56□□□□□ -0.72
GABPB1-206ENST00000543881 OR4F3Q6IEY1 312 aa10.56□□□□□ -0.72
GABPB1-206ENST00000543881 GPR119Q8TDV5 335 aa10.56□□□□□ -0.72
GABPB1-206ENST00000543881 RNF128Q8TEB7 428 aa10.56□□□□□ -0.72
GABPB1-206ENST00000543881 ABHD3Q8WU67 409 aa10.56□□□□□ -0.72
GABPB1-206ENST00000543881 SDF2Q99470 211 aa10.56□□□□□ -0.72
GABPB1-206ENST00000543881 PRPF18Q99633 342 aaKnown RBP10.56□□□□□ -0.72
GABPB1-206ENST00000543881 HOXD1Q9GZZ0 328 aa10.56□□□□□ -0.72
GABPB1-206ENST00000543881 AKTIPQ9H8T0 292 aa10.56□□□□□ -0.72
GABPB1-206ENST00000543881 ASIC5Q9NY37 505 aa10.56□□□□□ -0.72
GABPB1-206ENST00000543881 DTNAQ9Y4J8 743 aa10.56□□□□□ -0.72
GABPB1-206ENST00000543881 ACTL7BQ9Y614 415 aa10.56□□□□□ -0.72
GABPB1-206ENST00000543881 PRR14LQ5THK1 2151 aa10.56□□□□□ -0.72
GABPB1-206ENST00000543881 PHF1O43189 567 aaPredicted RBP10.55□□□□□ -0.72
GABPB1-206ENST00000543881 CD5LO43866 347 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 FCMRO60667 390 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 NUDT14O95848 222 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 SERPINE1P05121 402 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 TUBBP07437 444 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 KRT16P08779 473 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 PRKCAP17252 672 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 ELK4P28324 431 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 ADH6P28332 368 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 SOAT1P35610 550 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 EIF1P41567 113 aaKnown RBP10.55□□□□□ -0.72
GABPB1-206ENST00000543881 ABCE1P61221 599 aaKnown RBP10.55□□□□□ -0.72
GABPB1-206ENST00000543881 RPS4XP62701 263 aaKnown RBP10.55□□□□□ -0.72
GABPB1-206ENST00000543881 PHC1P78364 1004 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 MPP2Q14168 576 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 CHI3L2Q15782 390 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 KRT71Q3SY84 523 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 C6orf120Q7Z4R8 191 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 MREGQ8N565 214 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 ZNF527Q8NB42 609 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 MOAP1Q96BY2 351 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 ZBTB9Q96C00 473 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 SORT1Q99523 831 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 C12orf49Q9H741 205 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 COQ10BQ9H8M1 238 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 GLRX2Q9NS18 164 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 NOP53Q9NZM5 478 aaKnown RBP10.55□□□□□ -0.72
GABPB1-206ENST00000543881 LAMP3Q9UQV4 416 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 H3BNH8 94 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 GTPBP1O00178 669 aaKnown RBP10.55□□□□□ -0.72
GABPB1-206ENST00000543881 SCN2BO60939 215 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 DHRS4L1P0CG22 281 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 PPP3CBP16298 524 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 MATN1P21941 496 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 IDUAP35475 653 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 CASP9P55211 416 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 SUMO3P55854 103 aaPredicted RBP10.55□□□□□ -0.72
GABPB1-206ENST00000543881 ETFDHQ16134 617 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 SMU1Q2TAY7 513 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 TMEM176BQ3YBM2 270 aaPredicted RBP10.55□□□□□ -0.72
GABPB1-206ENST00000543881 CHRFAM7AQ494W8 412 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 PDSS1Q5T2R2 415 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 PDZK1Q5T2W1 519 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 BEND4Q6ZU67 534 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 NUFIP2Q7Z417 695 aaKnown RBP10.55□□□□□ -0.72
GABPB1-206ENST00000543881 TUSC5Q8IXB3 177 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 ZNF614Q8N883 585 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 ATP6V1C2Q8NEY4 427 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 RFWD2Q8NHY2 731 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 AKAP1Q92667 903 aaKnown RBP eCLIP10.55□□□□□ -0.72
GABPB1-206ENST00000543881 TRMT61AQ96FX7 289 aaKnown RBP10.55□□□□□ -0.72
GABPB1-206ENST00000543881 PLPPR2Q96GM1 343 aa10.55□□□□□ -0.72
GABPB1-206ENST00000543881 GPC6Q9Y625 555 aaPredicted RBP10.55□□□□□ -0.72
GABPB1-206ENST00000543881 UQCRHLA0A096LP55 91 aa10.54□□□□□ -0.72
GABPB1-206ENST00000543881 RNF103-CHMP3A0A140T963 221 aa10.54□□□□□ -0.72
GABPB1-206ENST00000543881 SERINC4A6NH21 518 aa10.54□□□□□ -0.72
GABPB1-206ENST00000543881 ETV2O00321 342 aaPredicted RBP10.54□□□□□ -0.72
GABPB1-206ENST00000543881 RNASET2O00584 256 aaKnown RBP10.54□□□□□ -0.72
GABPB1-206ENST00000543881 ANKRD28O15084 1053 aa10.54□□□□□ -0.72
GABPB1-206ENST00000543881 BIRC5O15392 142 aa10.54□□□□□ -0.72
GABPB1-206ENST00000543881 RGS16O15492 202 aaPredicted RBP10.54□□□□□ -0.72
GABPB1-206ENST00000543881 ZNF264O43296 627 aa10.54□□□□□ -0.72
GABPB1-206ENST00000543881 GCM2O75603 506 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms