RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 TAS2R43P59537 309 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 SIM1P81133 766 aaPredicted RBP11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 FAM74A3Q4VXF1 159 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 TP53I3Q53FA7 332 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 BAIAP2L2Q6UXY1 529 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 EVA1AQ9H8M9 152 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 SLC6A20Q9NP91 592 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 MED17Q9NVC6 651 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 GPR55Q9Y2T6 319 aaPredicted RBP11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 MAGEB4O15481 346 aaPredicted RBP11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 OR1F1O43749 312 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 ELFN1P0C7U0 828 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 SAGP10523 405 aaPredicted RBP11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 PTHLHP12272 177 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 FUT1P19526 365 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 FPR3P25089 353 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 OMPP47874 163 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 COL9A2Q14055 689 aaPredicted RBP11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 MELKQ14680 651 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 GLIPR2Q9H4G4 154 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 YIPF1Q9Y548 306 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 NPTNQ9Y639 398 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 CDHR4A6H8M9 788 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 H7BY64 318 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 EPXP11678 715 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 ZNF35P13682 527 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 IFNGR1P15260 489 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 MAT2AP31153 395 aaKnown RBP11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 CLDN12P56749 244 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 HEPHL1Q6MZM0 1159 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 TRAM1L1Q8N609 369 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 AUTS2Q8WXX7 1259 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 RAD51AP1Q96B01 352 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 ZG16BQ96DA0 208 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 GIMAP5Q96F15 307 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 SLC41A3Q96GZ6 507 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 PRAP1Q96NZ9 151 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 DERL3Q96Q80 235 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 OR52D1Q9H346 318 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 SLC39A1Q9NY26 324 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 ENTPD4Q9Y227 616 aa11.95□□□□□ -0.5
SFSWAP-209ENST00000540469 TRAV20A0A0B4J274 112 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 GOSR2O14653 212 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 TMPRSS11DO60235 418 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 SERPINA3P01011 423 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 ATP1B1P05026 303 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 PRLHRP49683 370 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 MAPK14Q16539 360 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 TMEM69Q5SWH9 247 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 NIPAL3Q6P499 406 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 PAQR7Q86WK9 346 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 RASGRP3Q8IV61 690 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 CMTM4Q8IZR5 234 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 OR10K1Q8NGX5 313 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 RGMAQ96B86 450 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 MFFQ9GZY8 342 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 SLC25A18Q9H1K4 315 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 IL20Q9NYY1 176 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 VWA8A3KMH1 1905 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 A0A0G2JPF8 293 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 HNRNPCL3B7ZW38 293 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 EPPINO95925 133 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 FGF2P09038 288 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 HNRNPCL4P0DMR1 293 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 TRHRP34981 398 aaPredicted RBP11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 EPHA4P54764 986 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 LINC00303Q3SY05 128 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 TMEM255AQ5JRV8 349 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 SPOUT1Q5T280 376 aaKnown RBP11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 OR5M1Q8NGP8 315 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 LINC01599Q8WXQ3 324 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 ATOH1Q92858 354 aaPredicted RBP11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 ORAI1Q96D31 301 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 CD180Q99467 661 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 ZNF768Q9H5H4 540 aaKnown RBP11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 PRDM9Q9NQV7 894 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 SLC7A7Q9UM01 511 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 A0A0G2JK05 382 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 ANTXRLA6NF34 631 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 RIIAD1A6NNX1 92 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 DISC1C4P0D8 188 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 SMAD9O15198 467 aaKnown RBP11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 GABRA1P14867 456 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 DLX5P56178 289 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 ZNF750Q32MQ0 723 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 FAM74A1Q5RGS3 127 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 PDSS1Q5T2R2 415 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 TMEM88Q6PEY1 159 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 HAGHLQ6PII5 290 aaPredicted RBP11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 GLDNQ6ZMI3 551 aaPredicted RBP11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 HSD17B13Q7Z5P4 300 aaPredicted RBP11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 IFNL1Q8IU54 200 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 OR5J2Q8NH18 312 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 BRIX1Q8TDN6 353 aaKnown RBP11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 OR14A2Q96R54 314 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 OR1F2PQ96R84 312 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 TSNAXQ99598 290 aaKnown RBP11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 ZNF649Q9BS31 505 aa11.94□□□□□ -0.5
SFSWAP-209ENST00000540469 SARGQ9BW04 601 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms