RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 REXO5Q96IC2 774 aaKnown RBP16.42■□□□□ 0.22
VEGFA-222ENST00000520948 SLC6A15Q9H2J7 730 aa16.42■□□□□ 0.22
VEGFA-222ENST00000520948 PIF1Q9H611 641 aa16.42■□□□□ 0.22
VEGFA-222ENST00000520948 TMEM181Q9P2C4 612 aa16.42■□□□□ 0.22
VEGFA-222ENST00000520948 IFT52Q9Y366 437 aa16.42■□□□□ 0.22
VEGFA-222ENST00000520948 C2CD3Q4AC94 2353 aa16.42■□□□□ 0.22
VEGFA-222ENST00000520948 TACC2O95359 2948 aa16.41■□□□□ 0.22
VEGFA-222ENST00000520948 FAM220BPB1ANY3 271 aa16.41■□□□□ 0.22
VEGFA-222ENST00000520948 E9PLN8 166 aa16.41■□□□□ 0.22
VEGFA-222ENST00000520948 PRRG2O14669 202 aa16.41■□□□□ 0.22
VEGFA-222ENST00000520948 CDC40O60508 579 aaKnown RBP eCLIP16.41■□□□□ 0.222e-13■■□□□ 11.5
VEGFA-222ENST00000520948 CPOXP36551 454 aa16.41■□□□□ 0.22
VEGFA-222ENST00000520948 MNAT1P51948 309 aa16.41■□□□□ 0.22
VEGFA-222ENST00000520948 SLC7A2P52569 658 aa16.41■□□□□ 0.22
VEGFA-222ENST00000520948 SUMO3P55854 103 aaPredicted RBP16.41■□□□□ 0.22
VEGFA-222ENST00000520948 GFRA1P56159 465 aa16.41■□□□□ 0.22
VEGFA-222ENST00000520948 TLE4Q04727 773 aa16.41■□□□□ 0.22
VEGFA-222ENST00000520948 VEZF1Q14119 521 aa16.41■□□□□ 0.22
VEGFA-222ENST00000520948 ARHGAP11AQ6P4F7 1023 aa16.41■□□□□ 0.22
VEGFA-222ENST00000520948 ERICH5Q6P6B1 374 aa16.41■□□□□ 0.22
VEGFA-222ENST00000520948 ARSKQ6UWY0 536 aa16.41■□□□□ 0.22
VEGFA-222ENST00000520948 MEX3BQ6ZN04 569 aaKnown RBP16.41■□□□□ 0.22
VEGFA-222ENST00000520948 ZNF836Q6ZNA1 936 aa16.41■□□□□ 0.22
VEGFA-222ENST00000520948 CCDC80Q76M96 950 aa16.41■□□□□ 0.22
VEGFA-222ENST00000520948 CDH24Q86UP0 819 aa16.41■□□□□ 0.22
VEGFA-222ENST00000520948 GRAMD2AQ8IUY3 354 aa16.41■□□□□ 0.22
VEGFA-222ENST00000520948 OR5W2Q8NH69 310 aa16.41■□□□□ 0.22
VEGFA-222ENST00000520948 CA5BP1Q8WTZ4 195 aa16.41■□□□□ 0.22
VEGFA-222ENST00000520948 PHF10Q8WUB8 498 aaKnown RBP16.41■□□□□ 0.22
VEGFA-222ENST00000520948 CNOT9Q92600 299 aaKnown RBP16.41■□□□□ 0.22
VEGFA-222ENST00000520948 DMRTA2Q96SC8 542 aa16.41■□□□□ 0.22
VEGFA-222ENST00000520948 VKORC1Q9BQB6 163 aa16.41■□□□□ 0.22
VEGFA-222ENST00000520948 LDAHQ9H6V9 325 aa16.41■□□□□ 0.22
VEGFA-222ENST00000520948 EXOSC3Q9NQT5 275 aaKnown RBP16.41■□□□□ 0.22
VEGFA-222ENST00000520948 DNAJB12Q9NXW2 375 aaKnown RBP16.41■□□□□ 0.22
VEGFA-222ENST00000520948 TAS2R10Q9NYW0 307 aa16.41■□□□□ 0.22
VEGFA-222ENST00000520948 GMPR2Q9P2T1 348 aaKnown RBP16.41■□□□□ 0.22
VEGFA-222ENST00000520948 SPRR3Q9UBC9 169 aa16.41■□□□□ 0.22
VEGFA-222ENST00000520948 ZNF232Q9UNY5 417 aa16.41■□□□□ 0.22
VEGFA-222ENST00000520948 ANGPT4Q9Y264 503 aa16.41■□□□□ 0.22
VEGFA-222ENST00000520948 ZNF443Q9Y2A4 671 aaPredicted RBP16.41■□□□□ 0.22
VEGFA-222ENST00000520948 HEATR5AQ86XA9 2040 aa16.41■□□□□ 0.22
VEGFA-222ENST00000520948 CCDC168Q8NDH2 2452 aa16.4■□□□□ 0.22
VEGFA-222ENST00000520948 ZNF407Q9C0G0 2248 aa16.4■□□□□ 0.22
VEGFA-222ENST00000520948 A0A087WZY1 265 aa16.4■□□□□ 0.22
VEGFA-222ENST00000520948 CDHR4A6H8M9 788 aa16.4■□□□□ 0.22
VEGFA-222ENST00000520948 OR14I1A6ND48 311 aa16.4■□□□□ 0.22
VEGFA-222ENST00000520948 ETV2O00321 342 aaPredicted RBP16.4■□□□□ 0.22
VEGFA-222ENST00000520948 ADAM11O75078 769 aa16.4■□□□□ 0.22
VEGFA-222ENST00000520948 MFN2O95140 757 aa16.4■□□□□ 0.22
VEGFA-222ENST00000520948 LINGO3P0C6S8 592 aa16.4■□□□□ 0.22
VEGFA-222ENST00000520948 HK1P19367 917 aa16.4■□□□□ 0.22
VEGFA-222ENST00000520948 CALB2P22676 271 aa16.4■□□□□ 0.22
VEGFA-222ENST00000520948 EEFSECP57772 596 aaKnown RBP16.4■□□□□ 0.22
VEGFA-222ENST00000520948 SLC25A3Q00325 362 aa16.4■□□□□ 0.22
VEGFA-222ENST00000520948 LIPEQ05469 1076 aa16.4■□□□□ 0.22
VEGFA-222ENST00000520948 TOMM20Q15388 145 aa16.4■□□□□ 0.22
VEGFA-222ENST00000520948 ZSWIM7Q19AV6 140 aa16.4■□□□□ 0.22
VEGFA-222ENST00000520948 LIN52Q52LA3 116 aa16.4■□□□□ 0.22
VEGFA-222ENST00000520948 ZNF311Q5JNZ3 666 aa16.4■□□□□ 0.22
VEGFA-222ENST00000520948 MRPL2Q5T653 305 aaKnown RBP16.4■□□□□ 0.22
VEGFA-222ENST00000520948 RNF220Q5VTB9 566 aa16.4■□□□□ 0.22
VEGFA-222ENST00000520948 VASNQ6EMK4 673 aa16.4■□□□□ 0.22
VEGFA-222ENST00000520948 PGAM4Q8N0Y7 254 aa16.4■□□□□ 0.22
VEGFA-222ENST00000520948 CLIP4Q8N3C7 705 aa16.4■□□□□ 0.22
VEGFA-222ENST00000520948 C14orf79Q96F83 325 aa16.4■□□□□ 0.22
VEGFA-222ENST00000520948 ZNF607Q96SK3 696 aa16.4■□□□□ 0.22
VEGFA-222ENST00000520948 NPAS1Q99742 590 aa16.4■□□□□ 0.22
VEGFA-222ENST00000520948 SPOCK3Q9BQ16 436 aa16.4■□□□□ 0.22
VEGFA-222ENST00000520948 DKKL1Q9UK85 242 aa16.4■□□□□ 0.22
VEGFA-222ENST00000520948 SLC6A5Q9Y345 797 aa16.4■□□□□ 0.22
VEGFA-222ENST00000520948 C7orf72A4D263 438 aa16.39■□□□□ 0.21
VEGFA-222ENST00000520948 M0QX08 132 aa16.39■□□□□ 0.21
VEGFA-222ENST00000520948 GMFGO60234 142 aa16.39■□□□□ 0.21
VEGFA-222ENST00000520948 EPPINO95925 133 aa16.39■□□□□ 0.21
VEGFA-222ENST00000520948 TPOP07202 933 aa16.39■□□□□ 0.21
VEGFA-222ENST00000520948 UBTFL6P0CB48 400 aaPredicted RBP16.39■□□□□ 0.21
VEGFA-222ENST00000520948 BMP7P18075 431 aa16.39■□□□□ 0.21
VEGFA-222ENST00000520948 CHMP24386 653 aa16.39■□□□□ 0.21
VEGFA-222ENST00000520948 PSMA4P25789 261 aaKnown RBP16.39■□□□□ 0.21
VEGFA-222ENST00000520948 PRKAR1BP31321 381 aa16.39■□□□□ 0.21
VEGFA-222ENST00000520948 PTGS2P35354 604 aa16.39■□□□□ 0.21
VEGFA-222ENST00000520948 CRYBA2P53672 197 aa16.39■□□□□ 0.21
VEGFA-222ENST00000520948 DLX5P56178 289 aa16.39■□□□□ 0.21
VEGFA-222ENST00000520948 CRYZQ08257 329 aaKnown RBP16.39■□□□□ 0.21
VEGFA-222ENST00000520948 LARS2Q15031 903 aaKnown RBP16.39■□□□□ 0.21
VEGFA-222ENST00000520948 TOMM34Q15785 309 aaPredicted RBP16.39■□□□□ 0.21
VEGFA-222ENST00000520948 PLPPR5Q32ZL2 321 aa16.39■□□□□ 0.21
VEGFA-222ENST00000520948 SLC25A53Q5H9E4 307 aa16.39■□□□□ 0.21
VEGFA-222ENST00000520948 EMC4Q5J8M3 183 aa16.39■□□□□ 0.21
VEGFA-222ENST00000520948 DHRS4L2Q6PKH6 230 aa16.39■□□□□ 0.21
VEGFA-222ENST00000520948 CD163Q86VB7 1156 aa16.39■□□□□ 0.21
VEGFA-222ENST00000520948 KRT73Q86Y46 540 aa16.39■□□□□ 0.21
VEGFA-222ENST00000520948 MICU2Q8IYU8 434 aa16.39■□□□□ 0.21
VEGFA-222ENST00000520948 OR2T12Q8NG77 320 aa16.39■□□□□ 0.21
VEGFA-222ENST00000520948 OR14L1PQ8NHC6 308 aa16.39■□□□□ 0.21
VEGFA-222ENST00000520948 FAM57AQ8TBR7 257 aa16.39■□□□□ 0.21
VEGFA-222ENST00000520948 POC1BQ8TC44 478 aa16.39■□□□□ 0.21
VEGFA-222ENST00000520948 TIMP4Q99727 224 aa16.39■□□□□ 0.21
VEGFA-222ENST00000520948 SPATA5L1Q9BVQ7 753 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms